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HG10020826 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020826
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionB12D protein
Genome locationChr05:2771126..2772524
RNA-Seq ExpressionHG10020826
SyntenyHG10020826
Gene Ontology termsGO:0000380 - alternative mRNA splicing, via spliceosome (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR010530 - NADH-ubiquinone reductase complex 1 MLRQ subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN64280.1 hypothetical protein Csa_013651 [Cucumis sativus]7.0e-4696.81Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQL+RNICINPEVRVTKENRAAGVLDNFAEGEKY+EHFLRKFVRNKSPEIMPSINNFFTDP+RN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
XP_004152455.2 uncharacterized protein LOC101218501 isoform X2 [Cucumis sativus]7.0e-4696.81Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQL+RNICINPEVRVTKENRAAGVLDNFAEGEKY+EHFLRKFVRNKSPEIMPSINNFFTDP+RN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
XP_008437938.1 PREDICTED: uncharacterized protein LOC103483212 [Cucumis melo]4.5e-4595.74Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPSS LSRWLRPEVYPLFAAVGVAVGICGFQL+RNICINPEVRV+KENRAAGVLDNFAEGEKY+EHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
XP_031736912.1 uncharacterized protein LOC101218501 isoform X1 [Cucumis sativus]2.2e-4494.79Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEV--RVTKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQL+RNICINPEV  RVTKENRAAGVLDNFAEGEKY+EHFLRKFVRNKSPEIMPSINNFFTDP+RN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEV--RVTKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
XP_038893556.1 uncharacterized protein LOC120082448 [Benincasa hispida]3.1e-4698.94Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRV+KENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
TrEMBL top hitse value%identityAlignment
A0A0A0LQT3 Uncharacterized protein3.4e-4696.81Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQL+RNICINPEVRVTKENRAAGVLDNFAEGEKY+EHFLRKFVRNKSPEIMPSINNFFTDP+RN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
A0A1S3AVT0 uncharacterized protein LOC1034832122.2e-4595.74Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPSS LSRWLRPEVYPLFAAVGVAVGICGFQL+RNICINPEVRV+KENRAAGVLDNFAEGEKY+EHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
A0A5A7UIX5 Uncharacterized protein2.2e-4595.74Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPSS LSRWLRPEVYPLFAAVGVAVGICGFQL+RNICINPEVRV+KENRAAGVLDNFAEGEKY+EHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
A0A6J1C941 uncharacterized protein LOC1110090922.7e-4394.68Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPS+ +SRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRV+KENR+AGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
A0A6J1E888 uncharacterized protein LOC1114317082.7e-4394.68Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPS+ ++RWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKY EHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G29970.1 B12D protein1.5e-2250.6Show/hide
Query:  LSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFT
        + RW+RPEVYPL  A+G    +  FQL RN  +NP+ R+ KE+R  G+L+N  EGEKYA+H  RK++R + P++MPS+N FF+
Subjt:  LSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFT
AT3G48140.1 B12D protein1.8e-3681.18Show/hide
Query:  SRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPS
        SRWLRPEVYPLFAA GVAVGIC F L+RNI  NPEVR TKENRAAG+LDN AEGEKY E+FLRKFVRNK PEIMP +N FFTDP+
Subjt:  SRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCTTCCTCCAACCTTAGTCGATGGCTGAGGCCTGAGGTTTACCCACTTTTCGCGGCGGTAGGAGTGGCCGTCGGAATCTGCGGATTTCAGTTAGTCCGTAACAT
CTGCATCAATCCTGAAGTCAGAGTGACCAAGGAGAATAGAGCCGCTGGAGTCCTGGATAACTTTGCTGAGGGAGAGAAGTATGCCGAACATTTCCTGAGGAAATTCGTGC
GCAACAAGTCCCCAGAAATTATGCCATCCATCAACAACTTCTTCACTGACCCAAGTCGAAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCTTCCTCCAACCTTAGTCGATGGCTGAGGCCTGAGGTTTACCCACTTTTCGCGGCGGTAGGAGTGGCCGTCGGAATCTGCGGATTTCAGTTAGTCCGTAACAT
CTGCATCAATCCTGAAGTCAGAGTGACCAAGGAGAATAGAGCCGCTGGAGTCCTGGATAACTTTGCTGAGGGAGAGAAGTATGCCGAACATTTCCTGAGGAAATTCGTGC
GCAACAAGTCCCCAGAAATTATGCCATCCATCAACAACTTCTTCACTGACCCAAGTCGAAACTAA
Protein sequenceShow/hide protein sequence
MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVTKENRAAGVLDNFAEGEKYAEHFLRKFVRNKSPEIMPSINNFFTDPSRN