; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10020836 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020836
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionGibberellin regulated protein
Genome locationChr05:2845835..2846228
RNA-Seq ExpressionHG10020836
SyntenyHG10020836
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055209.1 snakin-2-like isoform X1 [Cucumis melo var. makuwa]2.2e-3688.1Show/hide
Query:  MMRMEYDE-KVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP
        M  MEYDE +VMRG NRRLMQ I+CGGECKRRCGAHSRPNRCIRACGTCC RC+CVPPGTSGNREMCGTCYT+MTTHGNKTKCP
Subjt:  MMRMEYDE-KVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP

KGN64291.1 hypothetical protein Csa_013222 [Cucumis sativus]4.4e-4084.04Show/hide
Query:  QVSSD-YPEEGMMRMEYDEKVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP
        QVSS+ Y EEGM  MEYDEK+MRG NRRLMQ I+CGG+C+RRCGAHSRPNRCIRACGTCC RC+CVPPGTSGNREMCGTCYT+MTTHGN+TKCP
Subjt:  QVSSD-YPEEGMMRMEYDEKVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP

XP_008438094.1 PREDICTED: snakin-2-like isoform X1 [Cucumis melo]5.3e-3882.47Show/hide
Query:  QVSSD---YPEEGMMRMEYDE-KVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP
        Q+SSD     E GM  MEYDE +VMRG NRRLMQ I+CGGECKRRCGAHSRPNRCIRACGTCC RC+CVPPGTSGNREMCGTCYT+MTTHGNKTKCP
Subjt:  QVSSD---YPEEGMMRMEYDE-KVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP

XP_008438104.1 PREDICTED: snakin-2-like isoform X2 [Cucumis melo]5.3e-3882.47Show/hide
Query:  QVSSD---YPEEGMMRMEYDE-KVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP
        Q+SSD     E GM  MEYDE +VMRG NRRLMQ I+CGGECKRRCGAHSRPNRCIRACGTCC RC+CVPPGTSGNREMCGTCYT+MTTHGNKTKCP
Subjt:  QVSSD---YPEEGMMRMEYDE-KVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP

XP_038895055.1 snakin-2-like [Benincasa hispida]4.5e-4594.68Show/hide
Query:  QVSSD-YPEEGMMRMEYDEKVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP
        QVSSD YPEEGMM MEYDEKVMRGTNRRLMQNINCG ECKRRCGAHSRPNRCIRACGTCC+RCKCVP GTSGNREMCGTCYTNMTTHGNKTKCP
Subjt:  QVSSD-YPEEGMMRMEYDEKVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP

TrEMBL top hitse value%identityAlignment
A0A0A0LW79 Uncharacterized protein2.1e-4084.04Show/hide
Query:  QVSSD-YPEEGMMRMEYDEKVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP
        QVSS+ Y EEGM  MEYDEK+MRG NRRLMQ I+CGG+C+RRCGAHSRPNRCIRACGTCC RC+CVPPGTSGNREMCGTCYT+MTTHGN+TKCP
Subjt:  QVSSD-YPEEGMMRMEYDEKVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP

A0A1S3AVJ9 snakin-2-like isoform X22.6e-3882.47Show/hide
Query:  QVSSD---YPEEGMMRMEYDE-KVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP
        Q+SSD     E GM  MEYDE +VMRG NRRLMQ I+CGGECKRRCGAHSRPNRCIRACGTCC RC+CVPPGTSGNREMCGTCYT+MTTHGNKTKCP
Subjt:  QVSSD---YPEEGMMRMEYDE-KVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP

A0A1S3AW57 snakin-2-like isoform X12.6e-3882.47Show/hide
Query:  QVSSD---YPEEGMMRMEYDE-KVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP
        Q+SSD     E GM  MEYDE +VMRG NRRLMQ I+CGGECKRRCGAHSRPNRCIRACGTCC RC+CVPPGTSGNREMCGTCYT+MTTHGNKTKCP
Subjt:  QVSSD---YPEEGMMRMEYDE-KVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP

A0A5A7UP17 Snakin-2-like isoform X11.1e-3688.1Show/hide
Query:  MMRMEYDE-KVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP
        M  MEYDE +VMRG NRRLMQ I+CGGECKRRCGAHSRPNRCIRACGTCC RC+CVPPGTSGNREMCGTCYT+MTTHGNKTKCP
Subjt:  MMRMEYDE-KVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP

A0A7J7HX48 Uncharacterized protein2.1e-3273.12Show/hide
Query:  QVSSDYPEEGMMRMEYDEKVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP
        QVSSD+  E  M      +V+RGTNRRL+Q I+CGG CK+RC  HSRPN C RACGTCC RCKCVPPGTSGNREMCG CYT+MTTHGNKTKCP
Subjt:  QVSSDYPEEGMMRMEYDEKVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP

SwissProt top hitse value%identityAlignment
F4IQJ4 Gibberellin-regulated protein 111.2e-1661.29Show/hide
Query:  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP
        I+C   C+ RC   SRPN C RACGTCCARC CV PGTSGN + C  CY ++TTHG + KCP
Subjt:  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP

P46687 Gibberellin-regulated protein 34.1e-1759.68Show/hide
Query:  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP
        I+CGG CK RC   SRPN C+RAC +CC RC CVPPGT+GN  +C  CY ++TT G + KCP
Subjt:  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP

P46688 Gibberellin-regulated protein 25.4e-1759.68Show/hide
Query:  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP
        I+CGG CK RC   SR   C+RAC +CC+RC CVPPGTSGN  +C  CY ++TTHG + KCP
Subjt:  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP

Q93X17 Snakin-22.6e-1967.19Show/hide
Query:  QNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP
        + I+CGG C  RC   SRP  C RACGTCCARC CVPPGTSGN E C  CY ++TTHGNK KCP
Subjt:  QNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP

Q9LFR3 Gibberellin-regulated protein 149.8e-1966.13Show/hide
Query:  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP
        I+C   C  RCG HSR N C+RAC TCC RCKCVPPGT GN+E CG+CY NM T G K+KCP
Subjt:  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP

Arabidopsis top hitse value%identityAlignment
AT1G22690.1 Gibberellin-regulated family protein1.1e-1762.9Show/hide
Query:  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP
        INCG  C RRC   SR   C RACG+CCA+C+CVPPGTSGN   C  CY ++ THGNK KCP
Subjt:  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP

AT2G18420.1 Gibberellin-regulated family protein8.6e-1861.29Show/hide
Query:  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP
        I+C   C+ RC   SRPN C RACGTCCARC CV PGTSGN + C  CY ++TTHG + KCP
Subjt:  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP

AT4G09600.1 GAST1 protein homolog 32.9e-1859.68Show/hide
Query:  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP
        I+CGG CK RC   SRPN C+RAC +CC RC CVPPGT+GN  +C  CY ++TT G + KCP
Subjt:  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP

AT4G09610.1 GAST1 protein homolog 23.8e-1859.68Show/hide
Query:  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP
        I+CGG CK RC   SR   C+RAC +CC+RC CVPPGTSGN  +C  CY ++TTHG + KCP
Subjt:  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP

AT5G14920.1 Gibberellin-regulated family protein7.0e-2066.13Show/hide
Query:  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP
        I+C   C  RCG HSR N C+RAC TCC RCKCVPPGT GN+E CG+CY NM T G K+KCP
Subjt:  INCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGTATCTTCAGACTACCCAGAAGAAGGGATGATGCGAATGGAATATGATGAGAAAGTGATGAGAGGGACAAACAGAAGGCTGATGCAAAACATAAATTGTGGAGG
GGAATGCAAGCGACGGTGTGGGGCGCACTCGAGGCCAAACCGATGCATAAGAGCGTGCGGGACATGCTGTGCACGGTGCAAATGCGTGCCACCAGGAACGTCAGGCAACC
GTGAGATGTGTGGTACTTGCTACACCAACATGACCACACATGGCAACAAAACTAAGTGCCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGTATCTTCAGACTACCCAGAAGAAGGGATGATGCGAATGGAATATGATGAGAAAGTGATGAGAGGGACAAACAGAAGGCTGATGCAAAACATAAATTGTGGAGG
GGAATGCAAGCGACGGTGTGGGGCGCACTCGAGGCCAAACCGATGCATAAGAGCGTGCGGGACATGCTGTGCACGGTGCAAATGCGTGCCACCAGGAACGTCAGGCAACC
GTGAGATGTGTGGTACTTGCTACACCAACATGACCACACATGGCAACAAAACTAAGTGCCCTTAA
Protein sequenceShow/hide protein sequence
MQVSSDYPEEGMMRMEYDEKVMRGTNRRLMQNINCGGECKRRCGAHSRPNRCIRACGTCCARCKCVPPGTSGNREMCGTCYTNMTTHGNKTKCP