; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10020844 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020844
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description1-deoxy-D-xylulose-5-phosphate synthase
Genome locationChr05:2893358..2895463
RNA-Seq ExpressionHG10020844
SyntenyHG10020844
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019828.1 hypothetical protein SDJN02_18792 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-13993.41Show/hide
Query:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV
        MPGPGPHMLYAMGSGMAL +L+DGRFSPHHTLIYT+NAFFGPDIGSFS+WLSSVLGFS SSVPDAIHHPVFYILILGLPLCLFY+WLSS LL+KGLLDSV
Subjt:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV

Query:  FGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL
        FGVSLNRRQCL LISAGSFSHFFLDHLFEENGHSS YTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSI KQSYQS+KLI+VVATL
Subjt:  FGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL

Query:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL
        YS WCASQIYWA+PRRPAVGEEADLGVLVFL VYFFLPHYLCIKSMQPKDLEIRHLPL
Subjt:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL

XP_004152468.1 uncharacterized protein LOC101221499 isoform X1 [Cucumis sativus]1.4e-14194.96Show/hide
Query:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV
        MPGPGPHMLYAMGSGMALTTL+DGRFSPHHTL YT+NAFFGPDIGSFSDWLSSVLGFSASSVPD IHHPVFYILILGLPLCLFYSWLSSFLL KGLLDSV
Subjt:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV

Query:  FGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL
        FGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKS KSISKQSYQS+KL+VVVATL
Subjt:  FGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL

Query:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL
        YS WCASQIYWASPRRPAVGEEADLGVLVFLV YFFLPHYLCIKSMQPKD E +HLPL
Subjt:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL

XP_022923863.1 uncharacterized protein LOC111431454 [Cucurbita moschata]4.6e-14093.8Show/hide
Query:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV
        MPGPGPHMLYAMGSGMAL +L+DGRFSPHHTLIYT+NAFFGPDIGSFS+WLSSVLGFS SSVPDAIHHPVFYILILGLPLCLFY+WLSS LL+KGLLDSV
Subjt:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV

Query:  FGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL
        FGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSS YTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSI KQSYQS+KLI+VVATL
Subjt:  FGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL

Query:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL
        YS WCASQIYWA+PRRPAVGEEADLGVLVFL VYFFLPHYLCIKSMQPKDLEIRHLPL
Subjt:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL

XP_023519820.1 uncharacterized protein LOC111783152 [Cucurbita pepo subsp. pepo]2.3e-13993.02Show/hide
Query:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV
        MPGPGPHMLYAMGSGMAL +L+DGRFSPHHTLIYT+NAFFGPDIGSFS+WLSSVLGFS SSVPDAIHHPVFYILILGLPLCLFY+WLSS LL KGLLDSV
Subjt:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV

Query:  FGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL
        FGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSS YTWILSTGWWENRAPINPDAVMV+GFLCTCLIGGFVYINRVKSAKSI KQSYQS+KLI+VVATL
Subjt:  FGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL

Query:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL
        YS WCASQIYW +PRRPAVGEEADLGVLVFL VYFFLPHYLCIKSMQPKDLEIRHLPL
Subjt:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL

XP_038893660.1 uncharacterized protein LOC120082528 isoform X1 [Benincasa hispida]1.3e-14296.12Show/hide
Query:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV
        MPGPGPHMLYAMGSG ALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFS SSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLL+SV
Subjt:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV

Query:  FGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL
         GVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINR KSAKSISKQSYQS+KLI+VVATL
Subjt:  FGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL

Query:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL
        YS WCASQIYWASPRRPAVGEEADLGVLVFLV YFFLPHYLCIKSMQPKDLEI+HLPL
Subjt:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL

TrEMBL top hitse value%identityAlignment
A0A0A0LR72 Uncharacterized protein6.9e-14294.96Show/hide
Query:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV
        MPGPGPHMLYAMGSGMALTTL+DGRFSPHHTL YT+NAFFGPDIGSFSDWLSSVLGFSASSVPD IHHPVFYILILGLPLCLFYSWLSSFLL KGLLDSV
Subjt:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV

Query:  FGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL
        FGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKS KSISKQSYQS+KL+VVVATL
Subjt:  FGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL

Query:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL
        YS WCASQIYWASPRRPAVGEEADLGVLVFLV YFFLPHYLCIKSMQPKD E +HLPL
Subjt:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL

A0A1S3AWH9 uncharacterized protein LOC103483387 isoform X11.0e-13792.25Show/hide
Query:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV
        MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTL Y++NAFFGPDIGSFSDWLSSVLGF ASS+PDAIHHPVFYILILGLPLCLFYSWLSSFLL+KGLLDSV
Subjt:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV

Query:  FGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL
         GVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAV VVGFLC CLIGGFVYINRVKS KSISKQ +QS+KL+VVVATL
Subjt:  FGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL

Query:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL
        YS WCASQIYWASPRRPAVGEEAD GVLVFLV YFFLPHYLCIKSMQPKD E +HLPL
Subjt:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL

A0A6J1C7B1 uncharacterized protein LOC1110090546.9e-13489.53Show/hide
Query:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV
        MPGPGPHMLYAMGSGMAL TL+DGRFSPHH L+YT+NAFFGPDIGSFS+WL+S+LGFS SS+PDAIHHP+FYILILGLPLCLFYS+LSS LLQKG LDSV
Subjt:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV

Query:  FGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL
        FGVSLN RQCLLLISAGSFSHFFLDHLFEENGHSS YTWILSTGWW NRAPINPDAV++VGFLC CLIGGFVYINRVKSAKSI KQSYQS+KLIVVVATL
Subjt:  FGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL

Query:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL
        YS WCASQIYWASPRRPAVGEEADLGVLVFL  YFFLPHYLCIKSM PKDLEIR LPL
Subjt:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL

A0A6J1EAR6 uncharacterized protein LOC1114314542.2e-14093.8Show/hide
Query:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV
        MPGPGPHMLYAMGSGMAL +L+DGRFSPHHTLIYT+NAFFGPDIGSFS+WLSSVLGFS SSVPDAIHHPVFYILILGLPLCLFY+WLSS LL+KGLLDSV
Subjt:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV

Query:  FGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL
        FGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSS YTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSI KQSYQS+KLI+VVATL
Subjt:  FGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL

Query:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL
        YS WCASQIYWA+PRRPAVGEEADLGVLVFL VYFFLPHYLCIKSMQPKDLEIRHLPL
Subjt:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL

A0A6J1KN89 uncharacterized protein LOC1114950334.2e-13992.64Show/hide
Query:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV
        MPGPGPHMLYAMGSGMAL +L+DGRFSPHHTLIYT+NAFFGPDIGSFS+WLSSVLGFS SSVPDAIHHPVFYILILGLPLCLFY+WLSSFLL+KGLLDSV
Subjt:  MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSV

Query:  FGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL
        FGV LN+ QCLLLISAGSFSHFFLDHLFEENGHSS YTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSI KQSYQS+KLI+VVATL
Subjt:  FGVSLNRRQCLLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATL

Query:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL
        YS WCASQIYWA+PRRPA GEEADLGVLVFL VYFFLPHYLCIKSMQPKDLEIRHLPL
Subjt:  YSTWCASQIYWASPRRPAVGEEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCGGACCTGGGCCTCACATGCTCTACGCCATGGGCTCAGGCATGGCTCTGACGACTCTCACCGACGGCCGATTCAGCCCCCACCATACCCTCATTTACACCGTCAA
CGCCTTCTTCGGCCCCGACATCGGCTCCTTCTCCGATTGGCTCTCTTCCGTACTCGGTTTCTCAGCTTCTTCCGTTCCCGATGCAATCCATCATCCCGTCTTCTACATCC
TTATTCTGGGTCTTCCTCTCTGCCTCTTCTACTCCTGGCTTTCCTCTTTTCTTCTCCAAAAGGGCCTTCTCGATTCCGTCTTTGGGGTATCTCTTAATAGAAGGCAATGC
TTGTTGTTAATCTCAGCTGGTTCTTTTTCACACTTCTTTCTTGACCATTTGTTTGAGGAAAACGGGCATTCATCAACATACACTTGGATATTGAGCACTGGTTGGTGGGA
GAACCGAGCACCAATCAATCCAGATGCTGTTATGGTTGTTGGATTCCTGTGCACTTGCTTAATCGGCGGCTTTGTTTACATTAACAGAGTGAAGTCTGCAAAGTCGATTT
CGAAACAATCGTATCAGTCGTTAAAGCTTATCGTAGTTGTAGCTACCCTATATTCCACGTGGTGCGCAAGCCAGATATACTGGGCTAGCCCTCGTCGACCAGCTGTCGGT
GAAGAAGCCGACCTTGGAGTTTTAGTGTTTCTGGTTGTTTATTTTTTTCTACCTCATTATCTTTGTATAAAGTCCATGCAACCAAAAGATCTTGAAATCAGACATCTTCC
ATTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCGGACCTGGGCCTCACATGCTCTACGCCATGGGCTCAGGCATGGCTCTGACGACTCTCACCGACGGCCGATTCAGCCCCCACCATACCCTCATTTACACCGTCAA
CGCCTTCTTCGGCCCCGACATCGGCTCCTTCTCCGATTGGCTCTCTTCCGTACTCGGTTTCTCAGCTTCTTCCGTTCCCGATGCAATCCATCATCCCGTCTTCTACATCC
TTATTCTGGGTCTTCCTCTCTGCCTCTTCTACTCCTGGCTTTCCTCTTTTCTTCTCCAAAAGGGCCTTCTCGATTCCGTCTTTGGGGTATCTCTTAATAGAAGGCAATGC
TTGTTGTTAATCTCAGCTGGTTCTTTTTCACACTTCTTTCTTGACCATTTGTTTGAGGAAAACGGGCATTCATCAACATACACTTGGATATTGAGCACTGGTTGGTGGGA
GAACCGAGCACCAATCAATCCAGATGCTGTTATGGTTGTTGGATTCCTGTGCACTTGCTTAATCGGCGGCTTTGTTTACATTAACAGAGTGAAGTCTGCAAAGTCGATTT
CGAAACAATCGTATCAGTCGTTAAAGCTTATCGTAGTTGTAGCTACCCTATATTCCACGTGGTGCGCAAGCCAGATATACTGGGCTAGCCCTCGTCGACCAGCTGTCGGT
GAAGAAGCCGACCTTGGAGTTTTAGTGTTTCTGGTTGTTTATTTTTTTCTACCTCATTATCTTTGTATAAAGTCCATGCAACCAAAAGATCTTGAAATCAGACATCTTCC
ATTGTGA
Protein sequenceShow/hide protein sequence
MPGPGPHMLYAMGSGMALTTLTDGRFSPHHTLIYTVNAFFGPDIGSFSDWLSSVLGFSASSVPDAIHHPVFYILILGLPLCLFYSWLSSFLLQKGLLDSVFGVSLNRRQC
LLLISAGSFSHFFLDHLFEENGHSSTYTWILSTGWWENRAPINPDAVMVVGFLCTCLIGGFVYINRVKSAKSISKQSYQSLKLIVVVATLYSTWCASQIYWASPRRPAVG
EEADLGVLVFLVVYFFLPHYLCIKSMQPKDLEIRHLPL