; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10020915 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020915
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionShikimate dehydrogenase
Genome locationChr05:3564126..3564792
RNA-Seq ExpressionHG10020915
SyntenyHG10020915
Gene Ontology termsGO:0008652 - cellular amino acid biosynthetic process (biological process)
GO:0009073 - aromatic amino acid family biosynthetic process (biological process)
GO:0009423 - chorismate biosynthetic process (biological process)
GO:0019632 - shikimate metabolic process (biological process)
GO:0003855 - 3-dehydroquinate dehydratase activity (molecular function)
GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity (molecular function)
GO:0050661 - NADP binding (molecular function)
InterPro domainsIPR036291 - NAD(P)-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK12985.1 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase [Cucumis melo var. makuwa]1.4e-1090.24Show/hide
Query:  MTRLLREAEESGAAIVPGLEMFIRQAYEQYEGFTGLPVGLE
        MTRLLREAEESGAAIVPGLEMF RQAYEQYEGFTGLP   E
Subjt:  MTRLLREAEESGAAIVPGLEMFIRQAYEQYEGFTGLPVGLE
XP_004141974.1 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic [Cucumis sativus]1.4e-1090.24Show/hide
Query:  MTRLLREAEESGAAIVPGLEMFIRQAYEQYEGFTGLPVGLE
        MTRLLREAEESGAAIVPGLEMF RQAYEQYEGFTGLP   E
Subjt:  MTRLLREAEESGAAIVPGLEMFIRQAYEQYEGFTGLPVGLE
XP_008440089.1 PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like [Cucumis melo]1.4e-1090.24Show/hide
Query:  MTRLLREAEESGAAIVPGLEMFIRQAYEQYEGFTGLPVGLE
        MTRLLREAEESGAAIVPGLEMF RQAYEQYEGFTGLP   E
Subjt:  MTRLLREAEESGAAIVPGLEMFIRQAYEQYEGFTGLPVGLE
XP_038882078.1 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like isoform X1 [Benincasa hispida]3.7e-1192.68Show/hide
Query:  MTRLLREAEESGAAIVPGLEMFIRQAYEQYEGFTGLPVGLE
        MTRLLREAEESGAAIVPGLEMFIRQAYEQYEGFTGLP   E
Subjt:  MTRLLREAEESGAAIVPGLEMFIRQAYEQYEGFTGLPVGLE
XP_038882079.1 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like isoform X2 [Benincasa hispida]3.7e-1192.68Show/hide
Query:  MTRLLREAEESGAAIVPGLEMFIRQAYEQYEGFTGLPVGLE
        MTRLLREAEESGAAIVPGLEMFIRQAYEQYEGFTGLP   E
Subjt:  MTRLLREAEESGAAIVPGLEMFIRQAYEQYEGFTGLPVGLE
TrEMBL top hitse value%identityAlignment
A0A0A0KFV4 Uncharacterized protein6.8e-1190.24Show/hide
Query:  MTRLLREAEESGAAIVPGLEMFIRQAYEQYEGFTGLPVGLE
        MTRLLREAEESGAAIVPGLEMF RQAYEQYEGFTGLP   E
Subjt:  MTRLLREAEESGAAIVPGLEMFIRQAYEQYEGFTGLPVGLE
A0A1S3B0X5 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like6.8e-1190.24Show/hide
Query:  MTRLLREAEESGAAIVPGLEMFIRQAYEQYEGFTGLPVGLE
        MTRLLREAEESGAAIVPGLEMF RQAYEQYEGFTGLP   E
Subjt:  MTRLLREAEESGAAIVPGLEMFIRQAYEQYEGFTGLPVGLE
A0A5D3CN48 Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase6.8e-1190.24Show/hide
Query:  MTRLLREAEESGAAIVPGLEMFIRQAYEQYEGFTGLPVGLE
        MTRLLREAEESGAAIVPGLEMF RQAYEQYEGFTGLP   E
Subjt:  MTRLLREAEESGAAIVPGLEMFIRQAYEQYEGFTGLPVGLE
A0A6J1GFP6 Shikimate dehydrogenase8.8e-1190.24Show/hide
Query:  MTRLLREAEESGAAIVPGLEMFIRQAYEQYEGFTGLPVGLE
        MTRLLREAEESGAAIVPGLEMFIRQAY QYEGFTGLP   E
Subjt:  MTRLLREAEESGAAIVPGLEMFIRQAYEQYEGFTGLPVGLE
A0A6J1GFQ4 Shikimate dehydrogenase8.8e-1190.24Show/hide
Query:  MTRLLREAEESGAAIVPGLEMFIRQAYEQYEGFTGLPVGLE
        MTRLLREAEESGAAIVPGLEMFIRQAY QYEGFTGLP   E
Subjt:  MTRLLREAEESGAAIVPGLEMFIRQAYEQYEGFTGLPVGLE
SwissProt top hitse value%identityAlignment
Q9SQT8 Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic4.7e-0973.17Show/hide
Query:  MTRLLREAEESGAAIVPGLEMFIRQAYEQYEGFTGLPVGLE
        +TRLLREAEESGA  V G EMF+RQAYEQ+E FTGLP   E
Subjt:  MTRLLREAEESGAAIVPGLEMFIRQAYEQYEGFTGLPVGLE
Arabidopsis top hitse value%identityAlignment
AT3G06350.1 dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative3.3e-1073.17Show/hide
Query:  MTRLLREAEESGAAIVPGLEMFIRQAYEQYEGFTGLPVGLE
        +TRLLREAEESGA  V G EMF+RQAYEQ+E FTGLP   E
Subjt:  MTRLLREAEESGAAIVPGLEMFIRQAYEQYEGFTGLPVGLE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAGACTCTTGCGGGAAGCTGAGGAGTCTGGAGCAGCTATTGTTCCTGGATTGGAGATGTTCATCAGGCAAGCATATGAACAATATGAAGGGTTCACTGGCCTGCC
TGTTGGCCTTGAAAGCACCAGCCGAGGAGTAATTCAGTCTTTTGAAGAGACTGAAATAAATACAGACAAAAAAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTAGACTCTTGCGGGAAGCTGAGGAGTCTGGAGCAGCTATTGTTCCTGGATTGGAGATGTTCATCAGGCAAGCATATGAACAATATGAAGGGTTCACTGGCCTGCC
TGTTGGCCTTGAAAGCACCAGCCGAGGAGTAATTCAGTCTTTTGAAGAGACTGAAATAAATACAGACAAAAAAAATTAA
Protein sequenceShow/hide protein sequence
MTRLLREAEESGAAIVPGLEMFIRQAYEQYEGFTGLPVGLESTSRGVIQSFEETEINTDKKN