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HG10020928 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10020928
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRPM1-interacting protein 4-like
Genome locationChr05:3689293..3690850
RNA-Seq ExpressionHG10020928
SyntenyHG10020928
Gene Ontology termsNA
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652616.1 hypothetical protein Csa_013594 [Cucumis sativus]5.6e-2892.42Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQQRNEPVFNNESFPQYPPPK
        +DKGR LPKFG+WDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQ+RNEPVFNNES+PQYPPPK
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQQRNEPVFNNESFPQYPPPK
XP_004152507.2 protein NOI4 [Cucumis sativus]6.0e-3094.2Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQQRNEPVFNNESFPQYPPPK
        MASQDKGR LPKFG+WDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQ+RNEPVFNNES+PQYPPPK
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQQRNEPVFNNESFPQYPPPK
XP_008439256.1 PREDICTED: RPM1-interacting protein 4 isoform X1 [Cucumis melo]7.9e-3092.75Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQQRNEPVFNNESFPQYPPPK
        MASQD+GRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTG AANMVP++RNEPVFNNES+PQYPPPK
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQQRNEPVFNNESFPQYPPPK
XP_038894676.1 protein NOI4 isoform X1 [Benincasa hispida]2.3e-2994.2Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQQRNEPVFNNESFPQYPPPK
        MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAAN VPQQ +EPVFNNES+PQYPPPK
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQQRNEPVFNNESFPQYPPPK
XP_038894677.1 protein NOI4 isoform X2 [Benincasa hispida]2.3e-2994.2Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQQRNEPVFNNESFPQYPPPK
        MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAAN VPQQ +EPVFNNES+PQYPPPK
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQQRNEPVFNNESFPQYPPPK
TrEMBL top hitse value%identityAlignment
A0A0A0LRE5 AvrRpt-cleavage domain-containing protein2.9e-3094.2Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQQRNEPVFNNESFPQYPPPK
        MASQDKGR LPKFG+WDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQ+RNEPVFNNES+PQYPPPK
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQQRNEPVFNNESFPQYPPPK
A0A1S3AYE6 RPM1-interacting protein 4 isoform X24.7e-2889.55Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQQRNEPVFNNESFPQYPPPK
        + D+GRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTG AANMVP++RNEPVFNNES+PQYPPPK
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQQRNEPVFNNESFPQYPPPK
A0A1S3AZ04 RPM1-interacting protein 4 isoform X13.8e-3092.75Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQQRNEPVFNNESFPQYPPPK
        MASQD+GRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTG AANMVP++RNEPVFNNES+PQYPPPK
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQQRNEPVFNNESFPQYPPPK
A0A6J1GRZ4 RPM1-interacting protein 4-like4.4e-2685.51Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQQRNEPVFNNESFPQYPPPK
        MA QDKGRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTG+ ANMV  Q NEP +NNESFPQ PPPK
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQQRNEPVFNNESFPQYPPPK
A0A6J1K4F5 RPM1-interacting protein 4-like3.7e-2584.06Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQQRNEPVFNNESFPQYPPPK
        MA QDKG PLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTG+ ANMV  Q NEP +NNESFPQ PPPK
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQQRNEPVFNNESFPQYPPPK
SwissProt top hitse value%identityAlignment
O22633 Protein NOI44.8e-1462.32Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQQRNE-PVFNNESFPQYPPPKVYL
        DKGRPLPKFGEWDVN+PASAEGFTVIFNKAR+EKKT G   +  P + +E  V +    P  P PK +L
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQQRNE-PVFNNESFPQYPPPKVYL
Q8GYN5 RPM1-interacting protein 41.1e-0542.86Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKT----TGTAANMVPQQRNEPVFNNES
        S +K   +PKFG+WD NNP+SA+G+T IFNK R E+ +    +G++     Q    P  NN S
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKT----TGTAANMVPQQRNEPVFNNES
Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein2.9e-1460Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQQRNEPVFNNESFPQYPPPK
        DKGRPLPKFGEWDVN+P+SAEGFTVIFNKARNEKK  G + +     ++EP +N        P K
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQQRNEPVFNNESFPQYPPPK
AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein5.8e-1592.11Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTG
        DKGRPLPKFGEWDVN+PASAEGFTVIFNKAR+EKKT G
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTG
AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein4.5e-1589.74Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTG
        +DKGRPLPKFGEWDVN+PASAEGFTVIFNKAR+EKKT G
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTG
AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein2.6e-1561.43Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQQRNE-PVFNNESFPQYPPPKVYL
        +DKGRPLPKFGEWDVN+PASAEGFTVIFNKAR+EKKT G   +  P + +E  V +    P  P PK +L
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQQRNE-PVFNNESFPQYPPPKVYL
AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein4.9e-1455.56Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKT---TGTAANMV--PQQRNEPVFNNESFPQYPPPK
        +++KG+PLPKFGEWDVNNPASAEGFTVIF+KA +EKKT   +G   N +  PQ+      NN    Q P  K
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKT---TGTAANMV--PQQRNEPVFNNESFPQYPPPK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCGCAGGACAAGGGTCGTCCATTGCCAAAGTTTGGTGAATGGGATGTAAATAATCCTGCATCAGCAGAAGGATTTACAGTCATATTTAACAAGGCTAGAAATGA
GAAGAAGACCACTGGAACTGCTGCCAATATGGTCCCTCAACAAAGAAATGAACCTGTCTTCAACAATGAAAGTTTCCCTCAGTATCCTCCACCGAAGGTCTATTTAATAG
AAAACTTGAGAACCAATTTGTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCATCGCAGGACAAGGGTCGTCCATTGCCAAAGTTTGGTGAATGGGATGTAAATAATCCTGCATCAGCAGAAGGATTTACAGTCATATTTAACAAGGCTAGAAATGA
GAAGAAGACCACTGGAACTGCTGCCAATATGGTCCCTCAACAAAGAAATGAACCTGTCTTCAACAATGAAAGTTTCCCTCAGTATCCTCCACCGAAGGTCTATTTAATAG
AAAACTTGAGAACCAATTTGTTCTAG
Protein sequenceShow/hide protein sequence
MASQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQQRNEPVFNNESFPQYPPPKVYLIENLRTNLF