; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10021028 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021028
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr05:4703130..4705437
RNA-Seq ExpressionHG10021028
SyntenyHG10021028
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038895285.1 GATA zinc finger domain-containing protein 11-like isoform X1 [Benincasa hispida]1.5e-1239.25Show/hide
Query:  MMIRGIMSPPRSRSSPRQRSPNNAPIYPLSKPNPIHNLNEFELHKSHRKQTQPTAISSNKNNN---------------HSTSSKFMSSNP----NNPNGH
        M++RGI+SPPR++ S  + + NNA     SKPN        EL K+ R++T+PT I   KNNN                 ++SK +SS P    +NPNG 
Subjt:  MMIRGIMSPPRSRSSPRQRSPNNAPIYPLSKPNPIHNLNEFELHKSHRKQTQPTAISSNKNNN---------------HSTSSKFMSSNP----NNPNGH

Query:  KKLHNNSNSNSNSTTKI-------STTKPISQPATPLP--------RIMTGSSSRSELSSAPKPSAMAKDKYLLS-NGLLGQQNYHPHYSAPHYAALHHL
        KKL      + NSTTKI        T KP++    P P        RI + S SRSELSSA       K+KY  S NG       +  YSA HYA LH L
Subjt:  KKLHNNSNSNSNSTTKI-------STTKPISQPATPLP--------RIMTGSSSRSELSSAPKPSAMAKDKYLLS-NGLLGQQNYHPHYSAPHYAALHHL

Query:  HVPDWFQRVSVHGF
        HV D  QR+S+  F
Subjt:  HVPDWFQRVSVHGF

XP_038895286.1 hybrid signal transduction histidine kinase L-like isoform X2 [Benincasa hispida]6.7e-1339.44Show/hide
Query:  MMIRGIMSPPRSRSSPRQRSPNNAPIYPLSKPNPIHNLNEFELHKSHRKQTQPTAISSNKNNN---------------HSTSSKFMSSNP----NNPNGH
        M++RGI+SPPR++ S  + + NNA     SKPN        EL K+ R++T+PT I   KNNN                 ++SK +SS P    +NPNG 
Subjt:  MMIRGIMSPPRSRSSPRQRSPNNAPIYPLSKPNPIHNLNEFELHKSHRKQTQPTAISSNKNNN---------------HSTSSKFMSSNP----NNPNGH

Query:  KKLHNNSNSNSNSTTKI-------STTKPISQPATPLP--------RIMTGSSSRSELSSAPKPSAMAKDKYLLS-NGLLGQQNYHPHYSAPHYAALHHL
        KKL      + NSTTKI        T KP++    P P        RI + S SRSELSSA       K+KY  S NG       +  YSA HYA LH L
Subjt:  KKLHNNSNSNSNSTTKI-------STTKPISQPATPLP--------RIMTGSSSRSELSSAPKPSAMAKDKYLLS-NGLLGQQNYHPHYSAPHYAALHHL

Query:  HVPDWFQRVSVHG
        HV D  QR+S+ G
Subjt:  HVPDWFQRVSVHG

XP_038895287.1 hybrid signal transduction histidine kinase L-like isoform X3 [Benincasa hispida]1.9e-1239.34Show/hide
Query:  MMIRGIMSPPRSRSSPRQRSPNNAPIYPLSKPNPIHNLNEFELHKSHRKQTQPTAISSNKNNN---------------HSTSSKFMSSNP----NNPNGH
        M++RGI+SPPR++ S  + + NNA     SKPN        EL K+ R++T+PT I   KNNN                 ++SK +SS P    +NPNG 
Subjt:  MMIRGIMSPPRSRSSPRQRSPNNAPIYPLSKPNPIHNLNEFELHKSHRKQTQPTAISSNKNNN---------------HSTSSKFMSSNP----NNPNGH

Query:  KKLHNNSNSNSNSTTKI-------STTKPISQPATPLP--------RIMTGSSSRSELSSAPKPSAMAKDKYLLS-NGLLGQQNYHPHYSAPHYAALHHL
        KKL      + NSTTKI        T KP++    P P        RI + S SRSELSSA       K+KY  S NG       +  YSA HYA LH L
Subjt:  KKLHNNSNSNSNSTTKI-------STTKPISQPATPLP--------RIMTGSSSRSELSSAPKPSAMAKDKYLLS-NGLLGQQNYHPHYSAPHYAALHHL

Query:  HVPDWFQRVSV
        HV D  QR+S+
Subjt:  HVPDWFQRVSV

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATAAGAGGCATTATGAGTCCCCCAAGATCTCGATCCTCTCCAAGACAACGTAGCCCTAATAATGCACCTATTTATCCACTCTCCAAACCAAACCCCATCCATAA
TCTCAATGAGTTCGAGCTGCACAAAAGCCATAGAAAACAAACCCAACCCACTGCTATCTCTTCAAACAAAAACAACAACCATTCTACATCTTCAAAATTCATGTCCTCAA
ACCCAAATAATCCTAATGGCCACAAGAAATTACACAACAATTCCAATTCCAATTCCAATTCCACTACTAAAATCAGCACAACCAAACCAATAAGTCAACCGGCGACACCT
TTGCCAAGGATTATGACTGGTTCTAGTTCAAGATCTGAGCTTTCCTCTGCTCCCAAACCAAGCGCCATGGCCAAGGATAAGTATTTGCTTTCCAATGGGTTATTGGGTCA
GCAGAATTATCACCCTCATTATTCGGCTCCACATTATGCTGCACTTCACCATCTTCATGTTCCTGATTGGTTTCAACGTGTTTCTGTCCATGGATTTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGATAAGAGGCATTATGAGTCCCCCAAGATCTCGATCCTCTCCAAGACAACGTAGCCCTAATAATGCACCTATTTATCCACTCTCCAAACCAAACCCCATCCATAA
TCTCAATGAGTTCGAGCTGCACAAAAGCCATAGAAAACAAACCCAACCCACTGCTATCTCTTCAAACAAAAACAACAACCATTCTACATCTTCAAAATTCATGTCCTCAA
ACCCAAATAATCCTAATGGCCACAAGAAATTACACAACAATTCCAATTCCAATTCCAATTCCACTACTAAAATCAGCACAACCAAACCAATAAGTCAACCGGCGACACCT
TTGCCAAGGATTATGACTGGTTCTAGTTCAAGATCTGAGCTTTCCTCTGCTCCCAAACCAAGCGCCATGGCCAAGGATAAGTATTTGCTTTCCAATGGGTTATTGGGTCA
GCAGAATTATCACCCTCATTATTCGGCTCCACATTATGCTGCACTTCACCATCTTCATGTTCCTGATTGGTTTCAACGTGTTTCTGTCCATGGATTTGTTTAA
Protein sequenceShow/hide protein sequence
MMIRGIMSPPRSRSSPRQRSPNNAPIYPLSKPNPIHNLNEFELHKSHRKQTQPTAISSNKNNNHSTSSKFMSSNPNNPNGHKKLHNNSNSNSNSTTKISTTKPISQPATP
LPRIMTGSSSRSELSSAPKPSAMAKDKYLLSNGLLGQQNYHPHYSAPHYAALHHLHVPDWFQRVSVHGFV