; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10021031 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021031
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionserine/arginine repetitive matrix protein 1-like
Genome locationChr05:4758055..4760180
RNA-Seq ExpressionHG10021031
SyntenyHG10021031
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022994450.1 sporozoite surface protein 2-like [Cucurbita maxima]1.0e-0948.1Show/hide
Query:  LIRGIISPPRSRSSPREGKP-HNNVPINPPSKPTSKKPNNNSK---NPN--RSHRKETQQPTTAIRPTKNNNVNNTSSNNPSRTNPSTKPTSKLVSSNPS
        ++RGIISPPRSRSSPRE +P +NN   NPPSKP    P        NPN  R+HRKE  QPT   RPTK  +     S+NP R +PS +P SKLV S P+
Subjt:  LIRGIISPPRSRSSPREGKP-HNNVPINPPSKPTSKKPNNNSK---NPN--RSHRKETQQPTTAIRPTKNNNVNNTSSNNPSRTNPSTKPTSKLVSSNPS

Query:  ----GHKKLDNNSTTKI-----HPSKQTRSTPSKNSVKAGIASRSGSRSDLSSTAKPT
              KKLD  + T        P+K     PSK++VK   A+ SGSRSD  S AKP+
Subjt:  ----GHKKLDNNSTTKI-----HPSKQTRSTPSKNSVKAGIASRSGSRSDLSSTAKPT

XP_023542694.1 uncharacterized protein LOC111802521 [Cucurbita pepo subsp. pepo]5.8e-0845Show/hide
Query:  LIRGIISPPRSRSSPREGKP-HNNVPINPPSKPTSKKPNNN-----SKNPNRSHRKETQQPTTAIRPTKNNNVNNTSSNNPSRTNPSTKPTSKLVSSNPS
        ++RGIISPPRSRSSPRE +P +NN   NPPS+P    P        + N  R+HRKE  QPT   RPTK  +     S+NP R +PS +P SKLV S P+
Subjt:  LIRGIISPPRSRSSPREGKP-HNNVPINPPSKPTSKKPNNN-----SKNPNRSHRKETQQPTTAIRPTKNNNVNNTSSNNPSRTNPSTKPTSKLVSSNPS

Query:  ----GHKKLDNNSTTKI-------HPSKQTRSTPSKNSVKAGIASRSGSRSDLSSTAKPT
              +KLD  +  K         P+K     PSK++ K   AS SGSRSD  S AKP+
Subjt:  ----GHKKLDNNSTTKI-------HPSKQTRSTPSKNSVKAGIASRSGSRSDLSSTAKPT

XP_038895285.1 GATA zinc finger domain-containing protein 11-like isoform X1 [Benincasa hispida]1.9e-1947.91Show/hide
Query:  VLIRGIISPPRSRSSPREGKPHNNVPINPPSKPTSKKPNNNSKNPNRSHRKETQQPTTAIRPTKNNNVNNTSS-NNPSRTNPSTKPTSKLVS-------S
        +++RGI+SPPR++ S      +N           + KPN  SKN      +E  +PTT IRPTKNNN N  SS NN SR NPS K TSKLVS       S
Subjt:  VLIRGIISPPRSRSSPREGKPHNNVPINPPSKPTSKKPNNNSKNPNRSHRKETQQPTTAIRPTKNNNVNNTSS-NNPSRTNPSTKPTSKLVS-------S

Query:  NPSGHKKLDNNSTTKI--HPSK---------QTRSTP-SKNSVKAGIASRSGSRSDLSSTAK----------PTAIAKDKYYFDSAGHSATLHDLHVLEK
        NP+G KKLD NSTTKI   PS          QTR TP SK +VK  IAS SGSRS+LSS  K          P  +  +  Y  SAGH ATLHDLHV ++
Subjt:  NPSGHKKLDNNSTTKI--HPSK---------QTRSTP-SKNSVKAGIASRSGSRSDLSSTAK----------PTAIAKDKYYFDSAGHSATLHDLHVLEK

Query:  LQRFSIDGLVRGQKL
        LQR SID    G+ L
Subjt:  LQRFSIDGLVRGQKL

XP_038895286.1 hybrid signal transduction histidine kinase L-like isoform X2 [Benincasa hispida]6.6e-2046.9Show/hide
Query:  VLIRGIISPPRSRSSPREGKPHNNVPINPPSKPTSKKPNNNSKNPNRSHRKETQQPTTAIRPTKNNNVNNTSS-NNPSRTNPSTKPTSKLVS-------S
        +++RGI+SPPR++ S      +N           + KPN  SKN      +E  +PTT IRPTKNNN N  SS NN SR NPS K TSKLVS       S
Subjt:  VLIRGIISPPRSRSSPREGKPHNNVPINPPSKPTSKKPNNNSKNPNRSHRKETQQPTTAIRPTKNNNVNNTSS-NNPSRTNPSTKPTSKLVS-------S

Query:  NPSGHKKLDNNSTTKI--HPSK---------QTRSTP-SKNSVKAGIASRSGSRSDLSSTAK----------PTAIAKDKYYFDSAGHSATLHDLHVLEK
        NP+G KKLD NSTTKI   PS          QTR TP SK +VK  IAS SGSRS+LSS  K          P  +  +  Y  SAGH ATLHDLHV ++
Subjt:  NPSGHKKLDNNSTTKI--HPSK---------QTRSTP-SKNSVKAGIASRSGSRSDLSSTAK----------PTAIAKDKYYFDSAGHSATLHDLHVLEK

Query:  LQRFSIDGL-VRGQKLNLSKLLSIMG
        LQR SIDG  + G  L+ + +   MG
Subjt:  LQRFSIDGL-VRGQKLNLSKLLSIMG

XP_038895287.1 hybrid signal transduction histidine kinase L-like isoform X3 [Benincasa hispida]8.6e-2047.11Show/hide
Query:  VLIRGIISPPRSRSSPREGKPHNNVPINPPSKPTSKKPNNNSKNPNRSHRKETQQPTTAIRPTKNNNVNNTSS-NNPSRTNPSTKPTSKLVS-------S
        +++RGI+SPPR++ S      +N           + KPN  SKN      +E  +PTT IRPTKNNN N  SS NN SR NPS K TSKLVS       S
Subjt:  VLIRGIISPPRSRSSPREGKPHNNVPINPPSKPTSKKPNNNSKNPNRSHRKETQQPTTAIRPTKNNNVNNTSS-NNPSRTNPSTKPTSKLVS-------S

Query:  NPSGHKKLDNNSTTKI--HPSK---------QTRSTP-SKNSVKAGIASRSGSRSDLSSTAK----------PTAIAKDKYYFDSAGHSATLHDLHVLEK
        NP+G KKLD NSTTKI   PS          QTR TP SK +VK  IAS SGSRS+LSS  K          P  +  +  Y  SAGH ATLHDLHV ++
Subjt:  NPSGHKKLDNNSTTKI--HPSK---------QTRSTP-SKNSVKAGIASRSGSRSDLSSTAK----------PTAIAKDKYYFDSAGHSATLHDLHVLEK

Query:  LQRFSIDGLVRGQKLNLSKLLSIMG
        LQR SID L  G  L+ + +   MG
Subjt:  LQRFSIDGLVRGQKLNLSKLLSIMG

TrEMBL top hitse value%identityAlignment
A0A6J1C5Z8 uncharacterized protein LOC1110085887.6e-0635.19Show/hide
Query:  IRGIISPPRSRSSPREGKPHNNVPINPPSKPTSKKPNNNSKNPNRSHRKETQQPT-TAIRPTKNNNVNNTSSNNPSRTNPSTKPTSKLVSS---NPS---
        +RG+ISPPRSRSSPR+ +PHNN   NPPS+P    P        + H +  ++P+ TA R TK          +P R  PS KPT+ +V S   NP+   
Subjt:  IRGIISPPRSRSSPREGKPHNNVPINPPSKPTSKKPNNNSKNPNRSHRKETQQPT-TAIRPTKNNNVNNTSSNNPSRTNPSTKPTSKLVSS---NPS---

Query:  GHKKLDNNSTTKIHPSKQT--RSTP----------------SKNSV---KAGIASRSGSRSD-----LSSTAKPTAIAKDKYYFDSAGHS-------ATL
          KKLD  +T KI  +K +  R+ P                SKN+    K  IA  S SRSD      S ++K         + D   HS         L
Subjt:  GHKKLDNNSTTKIHPSKQT--RSTP----------------SKNSV---KAGIASRSGSRSD-----LSSTAKPTAIAKDKYYFDSAGHS-------ATL

Query:  HDLHVLEKLQRFSIDG
         D  +   LQR SIDG
Subjt:  HDLHVLEKLQRFSIDG

A0A6J1GTG4 serine/arginine repetitive matrix protein 1-like4.8e-0845.28Show/hide
Query:  LIRGIISPPRSRSSPREGKP-HNNVPINPPSKPTSKKPNNNSK---NPN--RSHRKETQQPTTAIRPTKNNNVNNTSSNNPSRTNPSTKPTSKLVSSNPS
        ++RGIISPPRSRSSPRE +P +NN   NPPS+P    P        NPN  R+HRKE  QPT   RPTK  +     S+NP R +PS +P SKL  S P+
Subjt:  LIRGIISPPRSRSSPREGKP-HNNVPINPPSKPTSKKPNNNSK---NPN--RSHRKETQQPTTAIRPTKNNNVNNTSSNNPSRTNPSTKPTSKLVSSNPS

Query:  GHKKLDNNSTTKIHPSKQTR----------STPSKNSVKAGIASRSGSRSDLSSTAKPT
             +    TK  P   TR          + PSK++ K   AS SGSRSD  S AKP+
Subjt:  GHKKLDNNSTTKIHPSKQTR----------STPSKNSVKAGIASRSGSRSDLSSTAKPT

A0A6J1K179 sporozoite surface protein 2-like5.1e-1048.1Show/hide
Query:  LIRGIISPPRSRSSPREGKP-HNNVPINPPSKPTSKKPNNNSK---NPN--RSHRKETQQPTTAIRPTKNNNVNNTSSNNPSRTNPSTKPTSKLVSSNPS
        ++RGIISPPRSRSSPRE +P +NN   NPPSKP    P        NPN  R+HRKE  QPT   RPTK  +     S+NP R +PS +P SKLV S P+
Subjt:  LIRGIISPPRSRSSPREGKP-HNNVPINPPSKPTSKKPNNNSK---NPN--RSHRKETQQPTTAIRPTKNNNVNNTSSNNPSRTNPSTKPTSKLVSSNPS

Query:  ----GHKKLDNNSTTKI-----HPSKQTRSTPSKNSVKAGIASRSGSRSDLSSTAKPT
              KKLD  + T        P+K     PSK++VK   A+ SGSRSD  S AKP+
Subjt:  ----GHKKLDNNSTTKI-----HPSKQTRSTPSKNSVKAGIASRSGSRSDLSSTAKPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTTAATTAGAGGAATTATCAGTCCCCCAAGATCCCGATCTTCTCCAAGAGAAGGCAAACCTCACAATAATGTACCCATCAATCCACCCTCCAAACCCACTTCAAA
GAAACCCAACAACAATAGTAAAAATCCCAACCGAAGCCATCGAAAAGAAACCCAACAACCCACTACTGCTATCCGTCCAACCAAAAACAACAACGTTAATAATACATCTT
CAAACAATCCTTCACGAACTAACCCATCAACAAAACCCACTTCAAAGCTCGTATCCTCAAATCCTAGCGGCCACAAGAAATTAGATAACAATTCCACTACTAAAATCCAC
CCCTCAAAACAGACGCGATCGACGCCTTCAAAGAACAGTGTAAAAGCAGGGATTGCCAGTCGTTCTGGTTCAAGATCTGACCTTTCGTCTACTGCCAAACCAACCGCCAT
TGCTAAGGATAAATATTATTTTGATTCGGCTGGACACTCTGCTACTCTACACGATCTTCATGTTCTTGAAAAGTTGCAACGTTTTTCTATCGACGGATTAGTTCGAGGAC
AAAAATTGAACTTGTCCAAACTATTGAGCATCATGGGTGAGAGTCTTCACATTGAAAACACTTGCCTCCACAGCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTTAATTAGAGGAATTATCAGTCCCCCAAGATCCCGATCTTCTCCAAGAGAAGGCAAACCTCACAATAATGTACCCATCAATCCACCCTCCAAACCCACTTCAAA
GAAACCCAACAACAATAGTAAAAATCCCAACCGAAGCCATCGAAAAGAAACCCAACAACCCACTACTGCTATCCGTCCAACCAAAAACAACAACGTTAATAATACATCTT
CAAACAATCCTTCACGAACTAACCCATCAACAAAACCCACTTCAAAGCTCGTATCCTCAAATCCTAGCGGCCACAAGAAATTAGATAACAATTCCACTACTAAAATCCAC
CCCTCAAAACAGACGCGATCGACGCCTTCAAAGAACAGTGTAAAAGCAGGGATTGCCAGTCGTTCTGGTTCAAGATCTGACCTTTCGTCTACTGCCAAACCAACCGCCAT
TGCTAAGGATAAATATTATTTTGATTCGGCTGGACACTCTGCTACTCTACACGATCTTCATGTTCTTGAAAAGTTGCAACGTTTTTCTATCGACGGATTAGTTCGAGGAC
AAAAATTGAACTTGTCCAAACTATTGAGCATCATGGGTGAGAGTCTTCACATTGAAAACACTTGCCTCCACAGCAAGTGA
Protein sequenceShow/hide protein sequence
MVLIRGIISPPRSRSSPREGKPHNNVPINPPSKPTSKKPNNNSKNPNRSHRKETQQPTTAIRPTKNNNVNNTSSNNPSRTNPSTKPTSKLVSSNPSGHKKLDNNSTTKIH
PSKQTRSTPSKNSVKAGIASRSGSRSDLSSTAKPTAIAKDKYYFDSAGHSATLHDLHVLEKLQRFSIDGLVRGQKLNLSKLLSIMGESLHIENTCLHSK