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HG10021034 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021034
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr05:4788968..4790516
RNA-Seq ExpressionHG10021034
SyntenyHG10021034
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038893970.1 uncharacterized protein LOC120082755 isoform X1 [Benincasa hispida]3.7e-0445Show/hide
Query:  RGFLSPRRSKPGTITKPEEKGSDEKETHLKTNHRSSSTSSLNPSK--STTKHQPQI----NNSILSSKSAPESSFTS--PASSARTTKSAAQPTTSKKNG
        RGFLSPRRS+PG     E+ GSDE++   K NHRSS+ SSLNPSK  ST   Q ++       I SSKSAPES+  S  PA + RTTK           G
Subjt:  RGFLSPRRSKPGTITKPEEKGSDEKETHLKTNHRSSSTSSLNPSK--STTKHQPQI----NNSILSSKSAPESSFTS--PASSARTTKSAAQPTTSKKNG

Query:  KGGTASRAKATVTKDNNVSH
        K    S +  T+ + N+ S+
Subjt:  KGGTASRAKATVTKDNNVSH
XP_038893971.1 uncharacterized protein LOC120082755 isoform X2 [Benincasa hispida]8.8e-0654.55Show/hide
Query:  RGFLSPRRSKPGTITKPEEKGSDEKETHLKTNHRSSSTSSLNPSK--STTKHQPQI----NNSILSSKSAPESSFTS--PASSARTTK
        RGFLSPRRS+PG     E+ GSDE++   K NHRSS+ SSLNPSK  ST   Q ++       I SSKSAPES+  S  PA + RTTK
Subjt:  RGFLSPRRSKPGTITKPEEKGSDEKETHLKTNHRSSSTSSLNPSK--STTKHQPQI----NNSILSSKSAPESSFTS--PASSARTTK
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGTTTTCTGAGTCCCCGAAGATCGAAACCGGGAACAATAACAAAACCCGAGGAGAAAGGAAGTGATGAAAAAGAAACCCATCTCAAAACCAACCATAGATCTTC
AAGTACTTCAAGTTTGAACCCATCAAAATCCACAACGAAGCATCAACCACAAATAAACAACAGTATTTTGAGCTCCAAATCTGCCCCTGAATCAAGCTTTACATCACCAG
CTTCCTCAGCTCGGACAACCAAATCAGCAGCTCAACCTACGACTTCAAAGAAGAATGGAAAAGGTGGGACTGCCTCTCGTGCTAAAGCAACCGTTACCAAGGATAATAAT
GTGAGTCATAAGTATTTTGATTCTCCAAATGCTTCTCCCACCCATTTCCCCACCTCTGTCAAAGTTGCTGATTCTGTTCTTCACACTCAATTACAACATCGTCTCGCTGT
TGACGACGAAGCAACTTTCCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGTTTTCTGAGTCCCCGAAGATCGAAACCGGGAACAATAACAAAACCCGAGGAGAAAGGAAGTGATGAAAAAGAAACCCATCTCAAAACCAACCATAGATCTTC
AAGTACTTCAAGTTTGAACCCATCAAAATCCACAACGAAGCATCAACCACAAATAAACAACAGTATTTTGAGCTCCAAATCTGCCCCTGAATCAAGCTTTACATCACCAG
CTTCCTCAGCTCGGACAACCAAATCAGCAGCTCAACCTACGACTTCAAAGAAGAATGGAAAAGGTGGGACTGCCTCTCGTGCTAAAGCAACCGTTACCAAGGATAATAAT
GTGAGTCATAAGTATTTTGATTCTCCAAATGCTTCTCCCACCCATTTCCCCACCTCTGTCAAAGTTGCTGATTCTGTTCTTCACACTCAATTACAACATCGTCTCGCTGT
TGACGACGAAGCAACTTTCCAATAA
Protein sequenceShow/hide protein sequence
MRGFLSPRRSKPGTITKPEEKGSDEKETHLKTNHRSSSTSSLNPSKSTTKHQPQINNSILSSKSAPESSFTSPASSARTTKSAAQPTTSKKNGKGGTASRAKATVTKDNN
VSHKYFDSPNASPTHFPTSVKVADSVLHTQLQHRLAVDDEATFQ