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HG10021073 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021073
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr05:5105312..5105653
RNA-Seq ExpressionHG10021073
SyntenyHG10021073
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584084.1 hypothetical protein SDJN03_20016, partial [Cucurbita argyrosperma subsp. sororia]2.6e-3983.19Show/hide
Query:  MSVLVTMRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQANSSSRRRPSYLRIRIRKFKLRIGKRLKKMKKTMSMSFSTARIGICKQFEQLRTCKSLFGG
        MS LVT R+N GYSRMEKEDP+EKKHRQAQFLIYKIMEQANS SRRR S LRIRIRKFKLRIG+RLKK+KKTMSM   TARIGICKQF QLRTCKSLFG 
Subjt:  MSVLVTMRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQANSSSRRRPSYLRIRIRKFKLRIGKRLKKMKKTMSMSFSTARIGICKQFEQLRTCKSLFGG

Query:  AKVETLAFPTLVT
        AK E LAFP+LV+
Subjt:  AKVETLAFPTLVT
KAG7019685.1 hypothetical protein SDJN02_18648, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-3882.3Show/hide
Query:  MSVLVTMRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQANSSSRRRPSYLRIRIRKFKLRIGKRLKKMKKTMSMSFSTARIGICKQFEQLRTCKSLFGG
        MS LVT R+N GYSRMEKEDP+EKKHRQAQFLIYKIMEQANS SRRR S LRIRIRKFKLRIG+RLKK+KKTMSM   TAR GICKQF QLRTCKSLFG 
Subjt:  MSVLVTMRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQANSSSRRRPSYLRIRIRKFKLRIGKRLKKMKKTMSMSFSTARIGICKQFEQLRTCKSLFGG

Query:  AKVETLAFPTLVT
        AK E LAFP+LV+
Subjt:  AKVETLAFPTLVT
KGN64527.1 hypothetical protein Csa_013452 [Cucumis sativus]2.1e-4182.73Show/hide
Query:  MSVLVTMRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQANSSSRRRPSYLRIRIRKFKLRIGKRLKKMKKTMSMSFSTARIGICKQFEQLRTCKSLFGG
        MSVL+T+R+NGGYS+MEKEDPDEKKHRQAQFLIYKIMEQA++ S+RRPS LRIRIRKFKLR+G+R KKMKKTM+MSFSTARIGIC QF QLR+CKSLFG 
Subjt:  MSVLVTMRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQANSSSRRRPSYLRIRIRKFKLRIGKRLKKMKKTMSMSFSTARIGICKQFEQLRTCKSLFGG

Query:  AKVETLAFPT
         KVETL FPT
Subjt:  AKVETLAFPT
XP_022140046.1 uncharacterized protein LOC111010796 [Momordica charantia]9.9e-3980.7Show/hide
Query:  MSVLVTMRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQANSSSRRRPSYLRIRIRKFKLRIGKRLKKMKKTMSMSFSTARIGICKQFEQLRTCKSLFG-
        MSV++T RK  GYSRMEKEDP+EKKHR+AQFLIYKIMEQANS SRRRP+ LRIRIRKFKLRIG+RLKK++K+MS S STARIGICKQ  QLRTCKSLFG 
Subjt:  MSVLVTMRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQANSSSRRRPSYLRIRIRKFKLRIGKRLKKMKKTMSMSFSTARIGICKQFEQLRTCKSLFG-

Query:  GAKVETLAFPTLVT
        G KVETLAFP+LV+
Subjt:  GAKVETLAFPTLVT
XP_023001322.1 uncharacterized protein LOC111495486 [Cucurbita maxima]2.9e-3881.42Show/hide
Query:  MSVLVTMRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQANSSSRRRPSYLRIRIRKFKLRIGKRLKKMKKTMSMSFSTARIGICKQFEQLRTCKSLFGG
        MS LVT R+N GYSRMEKEDP+EKKHRQAQFLIYKIMEQANS +RRR S LRIRIRKFKLRIG+RLKK+KKTMSM F TAR GICKQF QLRTCKSLFG 
Subjt:  MSVLVTMRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQANSSSRRRPSYLRIRIRKFKLRIGKRLKKMKKTMSMSFSTARIGICKQFEQLRTCKSLFGG

Query:  AKVETLAFPTLVT
         K E LAFP+LV+
Subjt:  AKVETLAFPTLVT
TrEMBL top hitse value%identityAlignment
A0A0A0LUT4 Uncharacterized protein1.0e-4182.73Show/hide
Query:  MSVLVTMRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQANSSSRRRPSYLRIRIRKFKLRIGKRLKKMKKTMSMSFSTARIGICKQFEQLRTCKSLFGG
        MSVL+T+R+NGGYS+MEKEDPDEKKHRQAQFLIYKIMEQA++ S+RRPS LRIRIRKFKLR+G+R KKMKKTM+MSFSTARIGIC QF QLR+CKSLFG 
Subjt:  MSVLVTMRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQANSSSRRRPSYLRIRIRKFKLRIGKRLKKMKKTMSMSFSTARIGICKQFEQLRTCKSLFGG

Query:  AKVETLAFPT
         KVETL FPT
Subjt:  AKVETLAFPT
A0A6J1CEK3 uncharacterized protein LOC1110107964.8e-3980.7Show/hide
Query:  MSVLVTMRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQANSSSRRRPSYLRIRIRKFKLRIGKRLKKMKKTMSMSFSTARIGICKQFEQLRTCKSLFG-
        MSV++T RK  GYSRMEKEDP+EKKHR+AQFLIYKIMEQANS SRRRP+ LRIRIRKFKLRIG+RLKK++K+MS S STARIGICKQ  QLRTCKSLFG 
Subjt:  MSVLVTMRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQANSSSRRRPSYLRIRIRKFKLRIGKRLKKMKKTMSMSFSTARIGICKQFEQLRTCKSLFG-

Query:  GAKVETLAFPTLVT
        G KVETLAFP+LV+
Subjt:  GAKVETLAFPTLVT
A0A6J1KG77 uncharacterized protein LOC1114954861.4e-3881.42Show/hide
Query:  MSVLVTMRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQANSSSRRRPSYLRIRIRKFKLRIGKRLKKMKKTMSMSFSTARIGICKQFEQLRTCKSLFGG
        MS LVT R+N GYSRMEKEDP+EKKHRQAQFLIYKIMEQANS +RRR S LRIRIRKFKLRIG+RLKK+KKTMSM F TAR GICKQF QLRTCKSLFG 
Subjt:  MSVLVTMRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQANSSSRRRPSYLRIRIRKFKLRIGKRLKKMKKTMSMSFSTARIGICKQFEQLRTCKSLFGG

Query:  AKVETLAFPTLVT
         K E LAFP+LV+
Subjt:  AKVETLAFPTLVT
A0A7J6HWJ0 Uncharacterized protein4.5e-2156.07Show/hide
Query:  LVTMRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQANSSSRRRPSYLRIRIRKFKLRIGKRLKKMKKTMSMSFSTARIGICKQFE-QLRTCKSLFGGAK
        +V  + + GYS+MEKEDP+EK HR+AQFLIYK+MEQA   SR+R SYLR+RI+K K++IGKRL K++K    S +TARI + +Q   QL+TCK LFGG  
Subjt:  LVTMRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQANSSSRRRPSYLRIRIRKFKLRIGKRLKKMKKTMSMSFSTARIGICKQFE-QLRTCKSLFGGAK

Query:  VETLAFP
         +T   P
Subjt:  VETLAFP
W9RFE3 Uncharacterized protein9.7e-2454.31Show/hide
Query:  VTMRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQANSSSRRRPSYLRIRIRKFKLRIGKRLKKMKKTMSMSFSTARIGICKQF-EQLRTCKSLFGGAK-
        + +RK   YS+++KEDP+E+  R+AQFLIYK+MEQA+S SRRRPSYLRIRIRK K++IGKRL K++K+M +S S A++ +CKQ   Q +TC+ LFGG   
Subjt:  VTMRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQANSSSRRRPSYLRIRIRKFKLRIGKRLKKMKKTMSMSFSTARIGICKQF-EQLRTCKSLFGGAK-

Query:  ------VETLAFPTLV
              V TL  P  V
Subjt:  ------VETLAFPTLV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G11655.1 unknown protein1.0e-0937.62Show/hide
Query:  YSRMEKEDPDEKKHRQAQFLIYKIMEQANSSSRRRP--SYLRIRIRKFKLRIGKRLKKMKKTMSMSFSTARIGICKQFEQ--LRTCKSLFGGAKVETLAF
        YS+M+KEDP+E   R+A+FLIYK +++A+  SRR P  S++R+++   K++IGKRL K+++++    S  R G  ++     +R  K +F G     L  
Subjt:  YSRMEKEDPDEKKHRQAQFLIYKIMEQANSSSRRRP--SYLRIRIRKFKLRIGKRLKKMKKTMSMSFSTARIGICKQFEQ--LRTCKSLFGGAKVETLAF

Query:  P
        P
Subjt:  P
AT4G04745.1 unknown protein2.5e-0849.25Show/hide
Query:  YSRMEKEDPDEKKHRQAQFLIYKIMEQANSSS-----RRRPS--YLRIRIRKFKLRIGKRLKKMKKT
        Y++MEKEDP E  HR+AQFLI K++E+A+S +     RRR S   + IR+   ++RIGK+L+K++KT
Subjt:  YSRMEKEDPDEKKHRQAQFLIYKIMEQANSSS-----RRRPS--YLRIRIRKFKLRIGKRLKKMKKT
AT4G21902.1 unknown protein3.4e-0534.18Show/hide
Query:  LVTMRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQANSSSRRRPSYLRIRIRKF-------KLRIGKRLKKMKKTMSM
        +  M+    Y+++EKED +E  HR+AQFLI+KI+++A+  + R+       I+ F       +++IGK+L+K++K+  M
Subjt:  LVTMRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQANSSSRRRPSYLRIRIRKF-------KLRIGKRLKKMKKTMSM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTTTTAGTGACAATGAGGAAAAATGGTGGTTATTCAAGGATGGAGAAGGAAGACCCAGATGAGAAAAAGCATAGACAAGCTCAGTTTTTGATTTACAAGATAAT
GGAGCAGGCAAATAGTAGCAGTAGGAGAAGACCCTCATATCTCAGAATCAGAATAAGGAAGTTTAAGTTAAGGATTGGAAAGAGGTTGAAGAAGATGAAGAAGACAATGT
CAATGAGTTTTTCTACAGCAAGAATTGGGATTTGCAAGCAATTTGAACAGCTTAGAACTTGTAAGAGCTTGTTTGGAGGAGCCAAGGTGGAAACTTTGGCCTTTCCTACT
TTGGTTACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGTTTTAGTGACAATGAGGAAAAATGGTGGTTATTCAAGGATGGAGAAGGAAGACCCAGATGAGAAAAAGCATAGACAAGCTCAGTTTTTGATTTACAAGATAAT
GGAGCAGGCAAATAGTAGCAGTAGGAGAAGACCCTCATATCTCAGAATCAGAATAAGGAAGTTTAAGTTAAGGATTGGAAAGAGGTTGAAGAAGATGAAGAAGACAATGT
CAATGAGTTTTTCTACAGCAAGAATTGGGATTTGCAAGCAATTTGAACAGCTTAGAACTTGTAAGAGCTTGTTTGGAGGAGCCAAGGTGGAAACTTTGGCCTTTCCTACT
TTGGTTACTTGA
Protein sequenceShow/hide protein sequence
MSVLVTMRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQANSSSRRRPSYLRIRIRKFKLRIGKRLKKMKKTMSMSFSTARIGICKQFEQLRTCKSLFGGAKVETLAFPT
LVT