; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10021079 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021079
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptiontobamovirus multiplication protein 1
Genome locationChr05:5148275..5149776
RNA-Seq ExpressionHG10021079
SyntenyHG10021079
Gene Ontology termsGO:0009705 - plant-type vacuole membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009457 - THH1/TOM1/TOM3 domain
IPR040226 - THH1/TOM1/TOM3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFP79065.1 tobamovirus multiplication protein 1 [Phtheirospermum japonicum]5.9e-5184.55Show/hide
Query:  LVIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEVALSAFDADASLDVLDHPLLNFIYYLLVEILPS
        ++ + QVCIW+Y+G+NDNS  EF+GKIFIAVVSFIAA+GFL+YGGRLFFMLRRFPIESKGRRKKLHEV LSAFD DASLDVLDHP+LN IYY LVEILPS
Subjt:  LVIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEVALSAFDADASLDVLDHPLLNFIYYLLVEILPS

Query:  ALVLYILRKLPPKRISAQYHPIR
        ALVLYILRKLPPKR+SAQYHPIR
Subjt:  ALVLYILRKLPPKRISAQYHPIR

KAA0056867.1 tobamovirus multiplication protein 1 [Cucumis melo var. makuwa]3.1e-5280.27Show/hide
Query:  VELNSELVIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHE------------------VALSAFDAD
        + +NS + +  QVCIWIYIGVNDNSVVEF+GKIFIAVVSFIAA+GFLIYGGRLFFMLRRFPIESKGRRKKLHE                  VALSAFDAD
Subjt:  VELNSELVIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHE------------------VALSAFDAD

Query:  ASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
        ASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
Subjt:  ASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR

XP_004145105.1 tobamovirus multiplication protein 1 [Cucumis sativus]3.1e-5280.27Show/hide
Query:  VELNSELVIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHE------------------VALSAFDAD
        + +NS + +  QVCIWIYIGVNDNSVVEF+GKIFIAVVSFIAA+GFLIYGGRLFFMLRRFPIESKGRRKKLHE                  VALSAFDAD
Subjt:  VELNSELVIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHE------------------VALSAFDAD

Query:  ASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
        ASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
Subjt:  ASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR

XP_008441185.1 PREDICTED: tobamovirus multiplication protein 1 [Cucumis melo]3.1e-5280.27Show/hide
Query:  VELNSELVIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHE------------------VALSAFDAD
        + +NS + +  QVCIWIYIGVNDNSVVEF+GKIFIAVVSFIAA+GFLIYGGRLFFMLRRFPIESKGRRKKLHE                  VALSAFDAD
Subjt:  VELNSELVIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHE------------------VALSAFDAD

Query:  ASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
        ASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
Subjt:  ASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR

XP_038895150.1 tobamovirus multiplication protein 1 [Benincasa hispida]4.1e-5281.76Show/hide
Query:  VELNSELVIY-GQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHE------------------VALSAFDA
        V ++   VIY  QVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHE                  V+LSAFDA
Subjt:  VELNSELVIY-GQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHE------------------VALSAFDA

Query:  DASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
        DASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
Subjt:  DASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR

TrEMBL top hitse value%identityAlignment
A0A0A0LU94 DUF1084 domain-containing protein1.5e-5280.27Show/hide
Query:  VELNSELVIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHE------------------VALSAFDAD
        + +NS + +  QVCIWIYIGVNDNSVVEF+GKIFIAVVSFIAA+GFLIYGGRLFFMLRRFPIESKGRRKKLHE                  VALSAFDAD
Subjt:  VELNSELVIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHE------------------VALSAFDAD

Query:  ASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
        ASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
Subjt:  ASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR

A0A1S3B2E1 tobamovirus multiplication protein 11.5e-5280.27Show/hide
Query:  VELNSELVIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHE------------------VALSAFDAD
        + +NS + +  QVCIWIYIGVNDNSVVEF+GKIFIAVVSFIAA+GFLIYGGRLFFMLRRFPIESKGRRKKLHE                  VALSAFDAD
Subjt:  VELNSELVIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHE------------------VALSAFDAD

Query:  ASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
        ASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
Subjt:  ASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR

A0A5A7UQF6 Tobamovirus multiplication protein 11.5e-5280.27Show/hide
Query:  VELNSELVIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHE------------------VALSAFDAD
        + +NS + +  QVCIWIYIGVNDNSVVEF+GKIFIAVVSFIAA+GFLIYGGRLFFMLRRFPIESKGRRKKLHE                  VALSAFDAD
Subjt:  VELNSELVIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHE------------------VALSAFDAD

Query:  ASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
        ASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
Subjt:  ASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR

A0A5D3BHU2 Tobamovirus multiplication protein 11.5e-5280.27Show/hide
Query:  VELNSELVIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHE------------------VALSAFDAD
        + +NS + +  QVCIWIYIGVNDNSVVEF+GKIFIAVVSFIAA+GFLIYGGRLFFMLRRFPIESKGRRKKLHE                  VALSAFDAD
Subjt:  VELNSELVIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHE------------------VALSAFDAD

Query:  ASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
        ASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
Subjt:  ASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR

A0A6J1K0T9 tobamovirus multiplication protein 1-like4.9e-5179.59Show/hide
Query:  VELNSELVIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHE------------------VALSAFDAD
        + +NS +V   QVCIWIYIGV+DNSVVE VGKI+IAVVSFIAA+GFLIYGGRLFFMLRRFPIESKGRRKKLHE                  VALSAFDAD
Subjt:  VELNSELVIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHE------------------VALSAFDAD

Query:  ASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
        ASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
Subjt:  ASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR

SwissProt top hitse value%identityAlignment
Q402F3 Tobamovirus multiplication protein 31.1e-3156.62Show/hide
Query:  QVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEV------------------ALSAFDADASLDVLDHPLL
        Q+ +W+ I      V+  + K+F A VS  AA+GFL+YGGRLF ML+RFP+ESKGRRKKL EV                    +AF+  A LDVLDHP+L
Subjt:  QVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEV------------------ALSAFDADASLDVLDHPLL

Query:  NFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
        N IYYLLVEILPS+LVL+ILRKLPPKR   QYHPIR
Subjt:  NFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR

Q402F4 Tobamovirus multiplication protein 13.7e-4873.38Show/hide
Query:  VIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHE------------------VALSAFDADASLDVLD
        + + Q CIW+Y+  NDNS VEF+GKIFIAVVSFIAA+GFL+YGGRLF MLRRFPIESKGRRKKLHE                  V LSAFD DASLDVLD
Subjt:  VIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHE------------------VALSAFDADASLDVLD

Query:  HPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPI
        HP+LN IYYLLVEILPSALVLYILRKLPPKR+SAQYHPI
Subjt:  HPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPI

Q948R8 Protein TOM THREE HOMOLOG 14.1e-3155.15Show/hide
Query:  QVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEV------------------ALSAFDADASLDVLDHPLL
        Q+ +W+ +      ++  + K+F A VS  AA+GFL+YGGRLF ML+RFP+ESKGRRKKL EV                     AFD  A LDVLDHP+L
Subjt:  QVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEV------------------ALSAFDADASLDVLDHPLL

Query:  NFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
        NFIYYLLVEILPS+LVL+ILRKLPPKR   QYH I+
Subjt:  NFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR

Q9FEG2 Tobamovirus multiplication protein 12.3e-4570Show/hide
Query:  VIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHE------------------VALSAFDADASLDVLD
        V   Q+ IW YI V+DNS VE VGKIFIAVVSFIAA+GFL+YGGRLFFMLRRFPIESKGRRKKLHE                  VA+SAFD D +LDVLD
Subjt:  VIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHE------------------VALSAFDADASLDVLD

Query:  HPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
        HP+LN IYY++VE+LPSALVL+ILRKLPPKR+SAQYHPI+
Subjt:  HPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR

Q9ZUM2 Tobamovirus multiplication protein 33.7e-3256.62Show/hide
Query:  QVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEV------------------ALSAFDADASLDVLDHPLL
        Q+ +W+ +      V+  + K+F A VS  AA+GFL+YGGRLF ML+RFP+ESKGRRKKL EV                    +AFD  A+LDVLDHP+L
Subjt:  QVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEV------------------ALSAFDADASLDVLDHPLL

Query:  NFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
        NFIYYLLVEILPS+LVL+ILRKLPPKR   QYH IR
Subjt:  NFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR

Arabidopsis top hitse value%identityAlignment
AT1G14530.1 Protein of unknown function (DUF1084)2.9e-3255.15Show/hide
Query:  QVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEV------------------ALSAFDADASLDVLDHPLL
        Q+ +W+ +      ++  + K+F A VS  AA+GFL+YGGRLF ML+RFP+ESKGRRKKL EV                     AFD  A LDVLDHP+L
Subjt:  QVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEV------------------ALSAFDADASLDVLDHPLL

Query:  NFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
        NFIYYLLVEILPS+LVL+ILRKLPPKR   QYH I+
Subjt:  NFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR

AT1G14530.2 Protein of unknown function (DUF1084)2.9e-3255.15Show/hide
Query:  QVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEV------------------ALSAFDADASLDVLDHPLL
        Q+ +W+ +      ++  + K+F A VS  AA+GFL+YGGRLF ML+RFP+ESKGRRKKL EV                     AFD  A LDVLDHP+L
Subjt:  QVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEV------------------ALSAFDADASLDVLDHPLL

Query:  NFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
        NFIYYLLVEILPS+LVL+ILRKLPPKR   QYH I+
Subjt:  NFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR

AT2G02180.1 tobamovirus multiplication protein 32.7e-3356.62Show/hide
Query:  QVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEV------------------ALSAFDADASLDVLDHPLL
        Q+ +W+ +      V+  + K+F A VS  AA+GFL+YGGRLF ML+RFP+ESKGRRKKL EV                    +AFD  A+LDVLDHP+L
Subjt:  QVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEV------------------ALSAFDADASLDVLDHPLL

Query:  NFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
        NFIYYLLVEILPS+LVL+ILRKLPPKR   QYH IR
Subjt:  NFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR

AT4G21790.1 tobamovirus multiplication 11.6e-4670Show/hide
Query:  VIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHE------------------VALSAFDADASLDVLD
        V   Q+ IW YI V+DNS VE VGKIFIAVVSFIAA+GFL+YGGRLFFMLRRFPIESKGRRKKLHE                  VA+SAFD D +LDVLD
Subjt:  VIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHE------------------VALSAFDADASLDVLD

Query:  HPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
        HP+LN IYY++VE+LPSALVL+ILRKLPPKR+SAQYHPI+
Subjt:  HPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTGTGTTGAACTCAACTCAGAGTTAGTAATCTATGGACAGGTTTGCATTTGGATATACATTGGGGTGAATGACAACAGTGTGGTGGAATTCGTTGGAAAAATTTT
CATTGCAGTGGTGTCTTTCATAGCTGCAGTAGGCTTCTTGATATATGGTGGAAGATTATTTTTCATGCTTAGACGTTTTCCAATTGAATCTAAAGGGAGAAGGAAGAAAC
TTCATGAGGTTGCTTTATCTGCTTTTGACGCAGATGCATCACTTGATGTTTTAGATCACCCCCTTCTGAATTTCATCTACTACTTGTTGGTCGAAATTCTGCCTTCAGCA
TTAGTTCTTTACATATTACGCAAATTGCCTCCTAAGAGAATATCAGCTCAATACCACCCCATTCGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTTGTGTTGAACTCAACTCAGAGTTAGTAATCTATGGACAGGTTTGCATTTGGATATACATTGGGGTGAATGACAACAGTGTGGTGGAATTCGTTGGAAAAATTTT
CATTGCAGTGGTGTCTTTCATAGCTGCAGTAGGCTTCTTGATATATGGTGGAAGATTATTTTTCATGCTTAGACGTTTTCCAATTGAATCTAAAGGGAGAAGGAAGAAAC
TTCATGAGGTTGCTTTATCTGCTTTTGACGCAGATGCATCACTTGATGTTTTAGATCACCCCCTTCTGAATTTCATCTACTACTTGTTGGTCGAAATTCTGCCTTCAGCA
TTAGTTCTTTACATATTACGCAAATTGCCTCCTAAGAGAATATCAGCTCAATACCACCCCATTCGCTAG
Protein sequenceShow/hide protein sequence
MFCVELNSELVIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEVALSAFDADASLDVLDHPLLNFIYYLLVEILPSA
LVLYILRKLPPKRISAQYHPIR