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HG10021081 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021081
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptiontobamovirus multiplication protein 1-like
Genome locationChr05:5151727..5151915
RNA-Seq ExpressionHG10021081
SyntenyHG10021081
Gene Ontology termsGO:0009705 - plant-type vacuole membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009457 - THH1/TOM1/TOM3 domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019681.1 Tobamovirus multiplication protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]9.6e-2094.44Show/hide
Query:  MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL
        MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCA+YALVSAVAL+ L
Subjt:  MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL

XP_022933215.1 tobamovirus multiplication protein 1-like [Cucurbita moschata]9.6e-2094.44Show/hide
Query:  MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL
        MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCA+YALVSAVAL+ L
Subjt:  MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL

XP_023001299.1 tobamovirus multiplication protein 1-like [Cucurbita maxima]1.3e-1994.44Show/hide
Query:  MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL
        MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYA+VSAVAL+ L
Subjt:  MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL

XP_023519001.1 tobamovirus multiplication protein 1 [Cucurbita pepo subsp. pepo]9.6e-2094.44Show/hide
Query:  MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL
        MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCA+YALVSAVAL+ L
Subjt:  MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL

XP_023542730.1 tobamovirus multiplication protein 1-like [Cucurbita pepo subsp. pepo]2.1e-1994.44Show/hide
Query:  MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL
        M RLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVAL+ L
Subjt:  MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL

TrEMBL top hitse value%identityAlignment
A0A0A0LU94 DUF1084 domain-containing protein3.0e-1992.59Show/hide
Query:  MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL
        M RLQLNLTT MEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVAL+ L
Subjt:  MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL

A0A6J1F4B4 tobamovirus multiplication protein 1-like4.7e-2094.44Show/hide
Query:  MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL
        MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCA+YALVSAVAL+ L
Subjt:  MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL

A0A6J1GU53 tobamovirus multiplication protein 1-like1.0e-1994.44Show/hide
Query:  MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL
        M RLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVAL+ L
Subjt:  MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL

A0A6J1K0T9 tobamovirus multiplication protein 1-like2.3e-1992.59Show/hide
Query:  MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL
        M RLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYA+VSAVAL+ L
Subjt:  MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL

A0A6J1KMC4 tobamovirus multiplication protein 1-like6.1e-2094.44Show/hide
Query:  MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL
        MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYA+VSAVAL+ L
Subjt:  MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL

SwissProt top hitse value%identityAlignment
Q402F3 Tobamovirus multiplication protein 33.1e-0556.76Show/hide
Query:  ASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL
        A SWW ++N S  WQDR+F+ L  +Y +VSAVALV L
Subjt:  ASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL

Q402F4 Tobamovirus multiplication protein 11.0e-0855.56Show/hide
Query:  MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL
        M RL L  ++++++    ++WW+ INES  WQD IFYSLCA YALVSAVAL+ L
Subjt:  MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL

Q948R8 Protein TOM THREE HOMOLOG 11.2e-0451.43Show/hide
Query:  SWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL
        +WW D+NES  WQDRIF+ L  +Y +VS +A++ L
Subjt:  SWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL

Q9FEG2 Tobamovirus multiplication protein 11.4e-0863.83Show/hide
Query:  LTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL
        LTTA+      +SWW+D+NEST WQD IF++LC  YALVSAVALV L
Subjt:  LTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL

Q9ZUM2 Tobamovirus multiplication protein 32.8e-0656.76Show/hide
Query:  ASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL
        AS+WW+D+NES  WQDRIF+ L  +Y +VS VA++ L
Subjt:  ASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL

Arabidopsis top hitse value%identityAlignment
AT1G14530.1 Protein of unknown function (DUF1084)8.4e-0651.43Show/hide
Query:  SWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL
        +WW D+NES  WQDRIF+ L  +Y +VS +A++ L
Subjt:  SWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL

AT1G14530.2 Protein of unknown function (DUF1084)8.4e-0651.43Show/hide
Query:  SWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL
        +WW D+NES  WQDRIF+ L  +Y +VS +A++ L
Subjt:  SWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL

AT2G02180.1 tobamovirus multiplication protein 32.0e-0756.76Show/hide
Query:  ASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL
        AS+WW+D+NES  WQDRIF+ L  +Y +VS VA++ L
Subjt:  ASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL

AT4G21790.1 tobamovirus multiplication 19.6e-1063.83Show/hide
Query:  LTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL
        LTTA+      +SWW+D+NEST WQD IF++LC  YALVSAVALV L
Subjt:  LTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGATTGCAGCTGAACTTGACGACGGCCATGGAGATGGGAGTTACGGCATCCAGCTGGTGGAATGACATTAACGAATCTACTTTTTGGCAGGATCGGATTTTCTA
CTCTCTCTGTGCTGTGTACGCGCTAGTCTCCGCCGTTGCTTTGGTCTCTCTCTTTTGCTTCCGTACCTCATCTATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGATTGCAGCTGAACTTGACGACGGCCATGGAGATGGGAGTTACGGCATCCAGCTGGTGGAATGACATTAACGAATCTACTTTTTGGCAGGATCGGATTTTCTA
CTCTCTCTGTGCTGTGTACGCGCTAGTCTCCGCCGTTGCTTTGGTCTCTCTCTTTTGCTTCCGTACCTCATCTATCTAA
Protein sequenceShow/hide protein sequence
MARLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALVSLFCFRTSSI