; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10021211 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021211
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionE3 ubiquitin-protein ligase RMA1H1-like
Genome locationChr05:6601319..6601987
RNA-Seq ExpressionHG10021211
SyntenyHG10021211
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0071712 - ER-associated misfolded protein catabolic process (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0016020 - membrane (cellular component)
GO:0044390 - ubiquitin-like protein conjugating enzyme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site
IPR018957 - Zinc finger, C3HC4 RING-type
IPR045103 - E3 ubiquitin-protein ligase RNF5/RNF185-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019622.1 E3 ubiquitin-protein ligase RMA1H1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-10282.88Show/hide
Query:  MRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNK
        M NSEK K CFDCNICL+FASEPIVTLCGHLYCWPCIYKWLHVQSASL PDEPPQCPVCKADISHTTMVPLYGRGQSA++AEVD RGLLIPPRPSA GNK
Subjt:  MRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNK

Query:  ALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNSYGLSGSSSTRLRRQEILA
         LA+I SNNASG+Q  YGDLYQNQN NFDMYDSYEEDSSSSLFN+EDNP GSF HPTA MF  TVY R F +SEN+YAHPNSY L+GS S +LR Q    
Subjt:  ALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNSYGLSGSSSTRLRRQEILA

Query:  EKSLNRISIFLFCCFVLCLAVF
        EKSLNRISIFLFCCFVLCLA+F
Subjt:  EKSLNRISIFLFCCFVLCLAVF

XP_008442466.1 PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Cucumis melo]9.5e-11087.39Show/hide
Query:  MRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNK
        M NSEK KPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAE AE DARG LIPPRPSAFGNK
Subjt:  MRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNK

Query:  ALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNSYGLSGSSSTRLRRQEILA
        ALATIRSNNAS QQFAYGDL QNQNYNFD+YDSYEEDS SSLF+LEDNP GS  HPTAG+  GTVY R + +SEN+Y HPNSYGLSGS+S RLRRQEI+A
Subjt:  ALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNSYGLSGSSSTRLRRQEILA

Query:  EKSLNRISIFLFCCFVLCLAVF
        EKSLNRIS FLFCCF+LCLAVF
Subjt:  EKSLNRISIFLFCCFVLCLAVF

XP_011653163.1 E3 ubiquitin-protein ligase RMA1H1 [Cucumis sativus]8.0e-10986.49Show/hide
Query:  MRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNK
        M NSEK KPCFDCNICLDFAS+PIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKA+ISHTTMVPLYGRGQSAE AEVDARG+LIPPRPSAFGNK
Subjt:  MRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNK

Query:  ALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNSYGLSGSSSTRLRRQEILA
        ALATIRSNNAS QQFAYGDL QNQNYNFD+YDSYEEDS SSLF+LEDNP GS  HPTAGM   TVY RF+ +SEN+Y HPNSYGLSGS+S RLRRQEI+A
Subjt:  ALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNSYGLSGSSSTRLRRQEILA

Query:  EKSLNRISIFLFCCFVLCLAVF
        EKSLN+I  FLFCCF+LCLAVF
Subjt:  EKSLNRISIFLFCCFVLCLAVF

XP_023519102.1 E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita pepo subsp. pepo]5.0e-10383.33Show/hide
Query:  MRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNK
        M NSEK K CFDCNICL+FASEPIVTLCGHLYCWPCIYKWLHVQSASL PDEPPQCPVCKADISHTTMVPLYGRGQSA++AEVD RGLLIPPRPSAFGNK
Subjt:  MRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNK

Query:  ALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNSYGLSGSSSTRLRRQEILA
         LA+I SNNASG+Q  YGDLYQNQN NFDMYDSYEEDSSSSLFN+EDNP GSF HPTA MF  TVY R F +SEN+YAHPNSY L+GS S +LR Q    
Subjt:  ALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNSYGLSGSSSTRLRRQEILA

Query:  EKSLNRISIFLFCCFVLCLAVF
        EKSLNRISIFLFCCFVLCLA+F
Subjt:  EKSLNRISIFLFCCFVLCLAVF

XP_038895713.1 E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida]1.2e-11290.54Show/hide
Query:  MRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNK
        M NSEK KPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASL PDEPPQCPVCKA+ISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNK
Subjt:  MRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNK

Query:  ALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNSYGLSGSSSTRLRRQEILA
        ALATIRSN ASGQQFAYGDLYQNQ YNFDMYDSYEEDSSSSLFNLED+  GS  HPTAGMF  TVYARFF NSEN+Y HP+SYG SG+SS RLRRQEILA
Subjt:  ALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNSYGLSGSSSTRLRRQEILA

Query:  EKSLNRISIFLFCCFVLCLAVF
        EKSLNRISIFLFCCFVLCL VF
Subjt:  EKSLNRISIFLFCCFVLCLAVF

TrEMBL top hitse value%identityAlignment
A0A0A0LUK5 RING-type domain-containing protein3.9e-10986.49Show/hide
Query:  MRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNK
        M NSEK KPCFDCNICLDFAS+PIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKA+ISHTTMVPLYGRGQSAE AEVDARG+LIPPRPSAFGNK
Subjt:  MRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNK

Query:  ALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNSYGLSGSSSTRLRRQEILA
        ALATIRSNNAS QQFAYGDL QNQNYNFD+YDSYEEDS SSLF+LEDNP GS  HPTAGM   TVY RF+ +SEN+Y HPNSYGLSGS+S RLRRQEI+A
Subjt:  ALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNSYGLSGSSSTRLRRQEILA

Query:  EKSLNRISIFLFCCFVLCLAVF
        EKSLN+I  FLFCCF+LCLAVF
Subjt:  EKSLNRISIFLFCCFVLCLAVF

A0A1S3B6D8 E3 ubiquitin-protein ligase RMA1H1-like4.6e-11087.39Show/hide
Query:  MRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNK
        M NSEK KPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAE AE DARG LIPPRPSAFGNK
Subjt:  MRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNK

Query:  ALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNSYGLSGSSSTRLRRQEILA
        ALATIRSNNAS QQFAYGDL QNQNYNFD+YDSYEEDS SSLF+LEDNP GS  HPTAG+  GTVY R + +SEN+Y HPNSYGLSGS+S RLRRQEI+A
Subjt:  ALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNSYGLSGSSSTRLRRQEILA

Query:  EKSLNRISIFLFCCFVLCLAVF
        EKSLNRIS FLFCCF+LCLAVF
Subjt:  EKSLNRISIFLFCCFVLCLAVF

A0A5A7UTV8 E3 ubiquitin-protein ligase RMA1H1-like4.6e-11087.39Show/hide
Query:  MRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNK
        M NSEK KPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAE AE DARG LIPPRPSAFGNK
Subjt:  MRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNK

Query:  ALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNSYGLSGSSSTRLRRQEILA
        ALATIRSNNAS QQFAYGDL QNQNYNFD+YDSYEEDS SSLF+LEDNP GS  HPTAG+  GTVY R + +SEN+Y HPNSYGLSGS+S RLRRQEI+A
Subjt:  ALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNSYGLSGSSSTRLRRQEILA

Query:  EKSLNRISIFLFCCFVLCLAVF
        EKSLNRIS FLFCCF+LCLAVF
Subjt:  EKSLNRISIFLFCCFVLCLAVF

A0A6J1EJS4 E3 ubiquitin-protein ligase RMA1H1-like2.1e-10282.43Show/hide
Query:  MRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNK
        M NSEK K CFDCNICL+FASEPIVTLCGHLYCWPCIYKWLH+QSASL PDEPPQCPVCKADISHTTMVPLYGR QSA++AEVD RGLLIPPRPSAFGNK
Subjt:  MRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNK

Query:  ALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNSYGLSGSSSTRLRRQEILA
         LA+I SNNASG+Q  YGDLYQNQN NFDMYDSYEEDSSSSLFN+EDNP GSF HPTA MF  TVY R F +SEN+YAHPNSY L+GS S +LR Q    
Subjt:  ALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNSYGLSGSSSTRLRRQEILA

Query:  EKSLNRISIFLFCCFVLCLAVF
        EKSLNRISIFLFCCFVLCLA+F
Subjt:  EKSLNRISIFLFCCFVLCLAVF

A0A6J1KJG8 E3 ubiquitin-protein ligase RMA1H1-like1.3e-9981.53Show/hide
Query:  MRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNK
        M NSE+ K CFDCNICL+FASEPIVTLCGHLYCWPCIYKWLHVQS SL PDEPPQCPVCKADISHTTMVPLYGRGQSA++AEVD RGLLIPPRPSAFGNK
Subjt:  MRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNK

Query:  ALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNSYGLSGSSSTRLRRQEILA
         LA+I SNNASG+Q  Y DLYQ QN NFDMYDSYEEDSSSSLFNLEDNP GSF HPTA MF  TVYAR F +SE+++AHPNSY L+GS S +LR Q    
Subjt:  ALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNSYGLSGSSSTRLRRQEILA

Query:  EKSLNRISIFLFCCFVLCLAVF
        EKSLNRISIFLFCCFVLCLA+F
Subjt:  EKSLNRISIFLFCCFVLCLAVF

SwissProt top hitse value%identityAlignment
O64425 E3 ubiquitin-protein ligase RMA13.7e-3238.89Show/hide
Query:  FDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPD--EPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNKALATIRSN
        FDCNICLD   EP+VTLCGHL+CWPCI+KWL VQS S + +     QCPVCK+ +SH+T+VPLYGRG+     E       +P RP       +  +   
Subjt:  FDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPD--EPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNKALATIRSN

Query:  NASGQQFAYGDLYQNQNYNFDM-YDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFF-RNSENMYAHPNSYGLSGSSSTRLRRQEILAEKSLNR
              +A  DL  +Q  +F+   + Y     S + +       +   P   M    V  R F     + +A+P++Y L+G+S  R+RR+ + A+KSL R
Subjt:  NASGQQFAYGDLYQNQNYNFDM-YDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFF-RNSENMYAHPNSYGLSGSSSTRLRRQEILAEKSLNR

Query:  ISIFLFCCFVLCLAVF
        I  F  CC VLCL +F
Subjt:  ISIFLFCCFVLCLAVF

P93030 E3 ubiquitin-protein ligase RMA23.6e-2735Show/hide
Query:  FDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLA-------PDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNKALA
        FDCNICLD   +P+VTLCGHL+CWPCI+KW +  + S           EPP+CPVCK+D+S  T+VP+YGRGQ A  +     G  +P RP+        
Subjt:  FDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLA-------PDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNKALA

Query:  TIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFF-RNSENMYAHPNSYGLSGSSSTRLRRQEILAEK
         +      GQ+   G   ++Q Y + M D                       P  G+    VY R F  +S NM  + +        + R RR+ + AE+
Subjt:  TIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFF-RNSENMYAHPNSYGLSGSSSTRLRRQEILAEK

Query:  SLNRISIFLFCCFVLCLAVF
        SL+R+ +FL C   +CL +F
Subjt:  SLNRISIFLFCCFVLCLAVF

Q6R567 E3 ubiquitin-protein ligase RMA1H16.7e-4247.14Show/hide
Query:  EKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASL--APDEPPQCPVCKADISHTTMVPLYGR-GQSAEDAEVDARGLLI-----PPRPSA
        E I   FDCNICLD   EP++TLCGHLYCWPCIYKW++ QS S   +  + PQCPVCKA++S  T++PLYGR GQS + +E  A  L I     PP P  
Subjt:  EKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASL--APDEPPQCPVCKADISHTTMVPLYGR-GQSAEDAEVDARGLLI-----PPRPSA

Query:  FGNKALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSE-NMYAHPNSYGLSGSSSTRLRR
         G+  L T  SN +   Q   G   Q+Q        SY    SS + +     A   +H   G  A   YAR F NS   MY +PNSY L+ SSS R+RR
Subjt:  FGNKALATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSE-NMYAHPNSYGLSGSSSTRLRR

Query:  QEILAEKSLNRISIFLFCCFVLCLAVF
        Q   A++SL RI  FLFCCFV CL +F
Subjt:  QEILAEKSLNRISIFLFCCFVLCLAVF

Q8GUK7 E3 ubiquitin-protein ligase RMA31.9e-3642.08Show/hide
Query:  CFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDE-PPQCPVCKADISHTTMVPLYGRGQSAEDA-----EVDARGLLIP--PRPSAFGNKA
        CFDCNICLD A +P+VTLCGHL+CWPCIYKWLHVQ +S++ D+    CPVCK++I+ T++VPLYGRG S+  +     + DA    IP  P PSA  N  
Subjt:  CFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDE-PPQCPVCKADISHTTMVPLYGRGQSAEDA-----EVDARGLLIP--PRPSAFGNKA

Query:  LATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNSYGLSGSSSTRLRRQEILAE
        + +  S N S Q       + N  Y+   + + E    ++   +      SF +P  GMF   VY R F    N  A P         S R+ ++    E
Subjt:  LATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNSYGLSGSSSTRLRRQEILAE

Query:  KSLNRISIFLFCCFVLCLAVF
        KSLNR+SIF  CC +LCL +F
Subjt:  KSLNRISIFLFCCFVLCLAVF

Q99942 E3 ubiquitin-protein ligase RNF55.2e-1850.59Show/hide
Query:  FDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRG-QSAEDAEVDARGLLIPPRP
        F+CNICL+ A E +V++CGHLYCWPC+++WL  +       E  +CPVCKA IS   +VPLYGRG Q  +D       L  PPRP
Subjt:  FDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRG-QSAEDAEVDARGLLIPPRP

Arabidopsis top hitse value%identityAlignment
AT1G19310.1 RING/U-box superfamily protein1.7e-2458.14Show/hide
Query:  FDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDA-RGLLIPPRPS
        F+CNICLD A +PIVTLCGHL+CWPC+YKWLH+ S S        CPVCKA I    +VPLYGRG+S+ D    +  GL +P RPS
Subjt:  FDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDA-RGLLIPPRPS

AT4G03510.1 RING membrane-anchor 12.6e-3338.89Show/hide
Query:  FDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPD--EPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNKALATIRSN
        FDCNICLD   EP+VTLCGHL+CWPCI+KWL VQS S + +     QCPVCK+ +SH+T+VPLYGRG+     E       +P RP       +  +   
Subjt:  FDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPD--EPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNKALATIRSN

Query:  NASGQQFAYGDLYQNQNYNFDM-YDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFF-RNSENMYAHPNSYGLSGSSSTRLRRQEILAEKSLNR
              +A  DL  +Q  +F+   + Y     S + +       +   P   M    V  R F     + +A+P++Y L+G+S  R+RR+ + A+KSL R
Subjt:  NASGQQFAYGDLYQNQNYNFDM-YDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFF-RNSENMYAHPNSYGLSGSSSTRLRRQEILAEKSLNR

Query:  ISIFLFCCFVLCLAVF
        I  F  CC VLCL +F
Subjt:  ISIFLFCCFVLCLAVF

AT4G03510.2 RING membrane-anchor 12.6e-3338.89Show/hide
Query:  FDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPD--EPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNKALATIRSN
        FDCNICLD   EP+VTLCGHL+CWPCI+KWL VQS S + +     QCPVCK+ +SH+T+VPLYGRG+     E       +P RP       +  +   
Subjt:  FDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPD--EPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNKALATIRSN

Query:  NASGQQFAYGDLYQNQNYNFDM-YDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFF-RNSENMYAHPNSYGLSGSSSTRLRRQEILAEKSLNR
              +A  DL  +Q  +F+   + Y     S + +       +   P   M    V  R F     + +A+P++Y L+G+S  R+RR+ + A+KSL R
Subjt:  NASGQQFAYGDLYQNQNYNFDM-YDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFF-RNSENMYAHPNSYGLSGSSSTRLRRQEILAEKSLNR

Query:  ISIFLFCCFVLCLAVF
        I  F  CC VLCL +F
Subjt:  ISIFLFCCFVLCLAVF

AT4G27470.1 RING membrane-anchor 31.3e-3742.08Show/hide
Query:  CFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDE-PPQCPVCKADISHTTMVPLYGRGQSAEDA-----EVDARGLLIP--PRPSAFGNKA
        CFDCNICLD A +P+VTLCGHL+CWPCIYKWLHVQ +S++ D+    CPVCK++I+ T++VPLYGRG S+  +     + DA    IP  P PSA  N  
Subjt:  CFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDE-PPQCPVCKADISHTTMVPLYGRGQSAEDA-----EVDARGLLIP--PRPSAFGNKA

Query:  LATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNSYGLSGSSSTRLRRQEILAE
        + +  S N S Q       + N  Y+   + + E    ++   +      SF +P  GMF   VY R F    N  A P         S R+ ++    E
Subjt:  LATIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNSYGLSGSSSTRLRRQEILAE

Query:  KSLNRISIFLFCCFVLCLAVF
        KSLNR+SIF  CC +LCL +F
Subjt:  KSLNRISIFLFCCFVLCLAVF

AT4G28270.1 RING membrane-anchor 22.5e-2835Show/hide
Query:  FDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLA-------PDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNKALA
        FDCNICLD   +P+VTLCGHL+CWPCI+KW +  + S           EPP+CPVCK+D+S  T+VP+YGRGQ A  +     G  +P RP+        
Subjt:  FDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLA-------PDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNKALA

Query:  TIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFF-RNSENMYAHPNSYGLSGSSSTRLRRQEILAEK
         +      GQ+   G   ++Q Y + M D                       P  G+    VY R F  +S NM  + +        + R RR+ + AE+
Subjt:  TIRSNNASGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFF-RNSENMYAHPNSYGLSGSSSTRLRRQEILAEK

Query:  SLNRISIFLFCCFVLCLAVF
        SL+R+ +FL C   +CL +F
Subjt:  SLNRISIFLFCCFVLCLAVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAACTCTGAGAAGATTAAGCCTTGCTTTGACTGCAACATTTGCTTAGACTTTGCATCTGAGCCTATAGTTACCCTCTGTGGCCACCTCTATTGCTGGCCTTGCAT
TTACAAGTGGCTTCATGTCCAGAGTGCCTCCCTCGCCCCCGATGAGCCTCCGCAATGTCCAGTTTGCAAGGCCGATATTTCCCACACGACAATGGTCCCTCTCTATGGCC
GTGGCCAATCGGCTGAAGATGCTGAGGTTGATGCCAGAGGGCTGCTCATACCTCCTAGACCATCAGCCTTCGGCAACAAGGCTCTGGCAACTATCAGATCTAATAATGCT
TCTGGCCAGCAGTTTGCTTATGGAGACCTATATCAAAACCAAAACTACAATTTTGATATGTATGACAGTTATGAAGAGGACTCCAGCAGCTCGTTGTTTAACCTTGAAGA
CAACCCGGCTGGTAGTTTTCGTCATCCTACGGCCGGGATGTTTGCGGGGACAGTGTATGCTAGGTTCTTTAGGAATTCAGAGAACATGTACGCACACCCAAATTCTTATG
GTCTAAGTGGGAGTAGCAGTACTCGGTTGAGAAGGCAGGAAATACTGGCCGAGAAGTCGCTTAATAGGATATCAATTTTTCTCTTCTGTTGCTTCGTTTTGTGCCTTGCT
GTATTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAAACTCTGAGAAGATTAAGCCTTGCTTTGACTGCAACATTTGCTTAGACTTTGCATCTGAGCCTATAGTTACCCTCTGTGGCCACCTCTATTGCTGGCCTTGCAT
TTACAAGTGGCTTCATGTCCAGAGTGCCTCCCTCGCCCCCGATGAGCCTCCGCAATGTCCAGTTTGCAAGGCCGATATTTCCCACACGACAATGGTCCCTCTCTATGGCC
GTGGCCAATCGGCTGAAGATGCTGAGGTTGATGCCAGAGGGCTGCTCATACCTCCTAGACCATCAGCCTTCGGCAACAAGGCTCTGGCAACTATCAGATCTAATAATGCT
TCTGGCCAGCAGTTTGCTTATGGAGACCTATATCAAAACCAAAACTACAATTTTGATATGTATGACAGTTATGAAGAGGACTCCAGCAGCTCGTTGTTTAACCTTGAAGA
CAACCCGGCTGGTAGTTTTCGTCATCCTACGGCCGGGATGTTTGCGGGGACAGTGTATGCTAGGTTCTTTAGGAATTCAGAGAACATGTACGCACACCCAAATTCTTATG
GTCTAAGTGGGAGTAGCAGTACTCGGTTGAGAAGGCAGGAAATACTGGCCGAGAAGTCGCTTAATAGGATATCAATTTTTCTCTTCTGTTGCTTCGTTTTGTGCCTTGCT
GTATTCTAG
Protein sequenceShow/hide protein sequence
MRNSEKIKPCFDCNICLDFASEPIVTLCGHLYCWPCIYKWLHVQSASLAPDEPPQCPVCKADISHTTMVPLYGRGQSAEDAEVDARGLLIPPRPSAFGNKALATIRSNNA
SGQQFAYGDLYQNQNYNFDMYDSYEEDSSSSLFNLEDNPAGSFRHPTAGMFAGTVYARFFRNSENMYAHPNSYGLSGSSSTRLRRQEILAEKSLNRISIFLFCCFVLCLA
VF