; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10021310 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021310
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptiondynamin-related protein 4C-like
Genome locationChr05:7560089..7562172
RNA-Seq ExpressionHG10021310
SyntenyHG10021310
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
GO:0008017 - microtubule binding (molecular function)
InterPro domainsIPR022812 - Dynamin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OVA17171.1 Dynamin central domain [Macleaya cordata]5.7e-1454.22Show/hide
Query:  SMELSDFVAPIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQLPTIV--------------VVEAMTAFIRIIGSAKESLKNILV
        S E     AP++S+YNDRIRPL+D VDKLRHLN++ EGIQLPTIV              + +AMTAF+R++GS+KESL+ IL+
Subjt:  SMELSDFVAPIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQLPTIV--------------VVEAMTAFIRIIGSAKESLKNILV

OVA17171.1 Dynamin central domain [Macleaya cordata]2.9e-1070.18Show/hide
Query:  EIVNELLG--PGGVGIEKMLEESPNLAVKRDKLNRSIGRLRDSKEVVANILDRIATF
        +IVNEL+G   GG GIE+MLEESP++A KRDKLNRSI  LRDSK+VVA I+DRIA +
Subjt:  EIVNELLG--PGGVGIEKMLEESPNLAVKRDKLNRSIGRLRDSKEVVANILDRIATF

XP_004147422.2 dynamin-related protein 4C [Cucumis sativus]1.4e-2072.62Show/hide
Query:  TATRSSSKNKNRRVSEIPNEQETIIYSPTKALVPV-GSMELSDFVAPIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQLPTIVVV
        T  +SSSK +N+++ +  N+QETI+ SP  ALVPV  S ELS+FVAPIVS YNDRIRPLID VDKLRHLNIMKEGIQLPTIVVV
Subjt:  TATRSSSKNKNRRVSEIPNEQETIIYSPTKALVPV-GSMELSDFVAPIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQLPTIVVV

XP_004147422.2 dynamin-related protein 4C [Cucumis sativus]8.5e-1879.03Show/hide
Query:  EDRSEEIVNELLGPGGVGIEKMLEESPNLAVKRDKLNRSIGRLRDSKEVVANILDRIATFAG
        E+   EIVNE+LGPGGVGIEKMLEESP+L +KRDKLNRS+GRLR++KEVV NILDRIATF G
Subjt:  EDRSEEIVNELLGPGGVGIEKMLEESPNLAVKRDKLNRSIGRLRDSKEVVANILDRIATFAG

XP_004147422.2 dynamin-related protein 4C [Cucumis sativus]2.2e-1870.73Show/hide
Query:  TRSSSKNKNRRVSEIPNEQETIIYSPTKALVPV-GSMELSDFVAPIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQLPTIVVV
        ++SSSK KN++++   +E+ETI+ SP  ALVPV  S E S+FVAPIVS +NDRIRPLIDVVDKLR LNIMKEGIQLPTIVVV
Subjt:  TRSSSKNKNRRVSEIPNEQETIIYSPTKALVPV-GSMELSDFVAPIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQLPTIVVV

XP_008443645.1 PREDICTED: dynamin-related protein 4C-like [Cucumis melo]5.0e-1880.65Show/hide
Query:  EDRSEEIVNELLGPGGVGIEKMLEESPNLAVKRDKLNRSIGRLRDSKEVVANILDRIATFAG
        E+   EIVNELLGPGGVG+EKMLEE+PNL++KRDKLNRSIGRLR+SK+VVAN LDRIATF G
Subjt:  EDRSEEIVNELLGPGGVGIEKMLEESPNLAVKRDKLNRSIGRLRDSKEVVANILDRIATFAG

XP_008443645.1 PREDICTED: dynamin-related protein 4C-like [Cucumis melo]4.2e-1779.1Show/hide
Query:  DGLLEDRSE-EIVNELLGPGGVGIEKMLEESPNLAVKRDKLNRSIGRLRDSKEVVANILDRIATFAG
        D L+    E EIV ELLGPGGVGIEKMLEESP LAVKR+KL+RSIGRLR+S+EVVANILDRIATF G
Subjt:  DGLLEDRSE-EIVNELLGPGGVGIEKMLEESPNLAVKRDKLNRSIGRLRDSKEVVANILDRIATFAG

XP_022139859.1 LOW QUALITY PROTEIN: dynamin-related protein 4C-like [Momordica charantia]6.9e-1268.35Show/hide
Query:  SSKNKNRRVSEIPNEQETIIYSPTKALVPVGS-MELSDFVAPIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQLPTIVVV
        S+KNK    S +PNEQE        A+V VGS  +    VAPIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQL TIVVV
Subjt:  SSKNKNRRVSEIPNEQETIIYSPTKALVPVGS-MELSDFVAPIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQLPTIVVV

XP_022139859.1 LOW QUALITY PROTEIN: dynamin-related protein 4C-like [Momordica charantia]6.7e-1531.25Show/hide
Query:  VAPIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQLPTIVVV--------------------------------------EAMTAFIRIIGS----------
        VAP+VSSY +RIRP++D ++ LR LNI KEGIQLPTIVVV                                      E    + ++IGS          
Subjt:  VAPIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQLPTIVVV--------------------------------------EAMTAFIRIIGS----------

Query:  -AKESLKNILVRARIVHKTSGWKFSSENHDSRVWGSGSGRDSSVRTTSSSGVRSENENDGLL-EDRSEEIVNELLGPGGVGIEKMLEESPNLAVKRDKLN
         + +++ N     ++ H T       +  D +   +   +    R   ++ +  +     LL +D   +++ +++ P G GIE++ EE+P++AV+RD LN
Subjt:  -AKESLKNILVRARIVHKTSGWKFSSENHDSRVWGSGSGRDSSVRTTSSSGVRSENENDGLL-EDRSEEIVNELLGPGGVGIEKMLEESPNLAVKRDKLN

Query:  RSIGRLRDSKEVVANILDRIATFA
        RSI  L++SKEVVA+I+D+I+T+A
Subjt:  RSIGRLRDSKEVVANILDRIATFA

TrEMBL top hitse value%identityAlignment
A0A0A0LX52 Uncharacterized protein6.8e-2172.62Show/hide
Query:  TATRSSSKNKNRRVSEIPNEQETIIYSPTKALVPV-GSMELSDFVAPIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQLPTIVVV
        T  +SSSK +N+++ +  N+QETI+ SP  ALVPV  S ELS+FVAPIVS YNDRIRPLID VDKLRHLNIMKEGIQLPTIVVV
Subjt:  TATRSSSKNKNRRVSEIPNEQETIIYSPTKALVPV-GSMELSDFVAPIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQLPTIVVV

A0A0A0LX52 Uncharacterized protein4.1e-1879.03Show/hide
Query:  EDRSEEIVNELLGPGGVGIEKMLEESPNLAVKRDKLNRSIGRLRDSKEVVANILDRIATFAG
        E+   EIVNE+LGPGGVGIEKMLEESP+L +KRDKLNRS+GRLR++KEVV NILDRIATF G
Subjt:  EDRSEEIVNELLGPGGVGIEKMLEESPNLAVKRDKLNRSIGRLRDSKEVVANILDRIATFAG

A0A0A0LX52 Uncharacterized protein1.1e-1870.73Show/hide
Query:  TRSSSKNKNRRVSEIPNEQETIIYSPTKALVPV-GSMELSDFVAPIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQLPTIVVV
        ++SSSK KN++++   +E+ETI+ SP  ALVPV  S E S+FVAPIVS +NDRIRPLIDVVDKLR LNIMKEGIQLPTIVVV
Subjt:  TRSSSKNKNRRVSEIPNEQETIIYSPTKALVPV-GSMELSDFVAPIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQLPTIVVV

A0A1S3B818 dynamin-related protein 4C-like2.4e-1880.65Show/hide
Query:  EDRSEEIVNELLGPGGVGIEKMLEESPNLAVKRDKLNRSIGRLRDSKEVVANILDRIATFAG
        E+   EIVNELLGPGGVG+EKMLEE+PNL++KRDKLNRSIGRLR+SK+VVAN LDRIATF G
Subjt:  EDRSEEIVNELLGPGGVGIEKMLEESPNLAVKRDKLNRSIGRLRDSKEVVANILDRIATFAG

A0A1S3B818 dynamin-related protein 4C-like2.0e-1779.1Show/hide
Query:  DGLLEDRSE-EIVNELLGPGGVGIEKMLEESPNLAVKRDKLNRSIGRLRDSKEVVANILDRIATFAG
        D L+    E EIV ELLGPGGVGIEKMLEESP LAVKR+KL+RSIGRLR+S+EVVANILDRIATF G
Subjt:  DGLLEDRSE-EIVNELLGPGGVGIEKMLEESPNLAVKRDKLNRSIGRLRDSKEVVANILDRIATFAG

A0A5A7UPN5 Dynamin-related protein 4C-like2.4e-1880.65Show/hide
Query:  EDRSEEIVNELLGPGGVGIEKMLEESPNLAVKRDKLNRSIGRLRDSKEVVANILDRIATFAG
        E+   EIVNELLGPGGVG+EKMLEE+PNL++KRDKLNRSIGRLR+SK+VVAN LDRIATF G
Subjt:  EDRSEEIVNELLGPGGVGIEKMLEESPNLAVKRDKLNRSIGRLRDSKEVVANILDRIATFAG

A0A5A7UPN5 Dynamin-related protein 4C-like1.1e-1870.73Show/hide
Query:  TRSSSKNKNRRVSEIPNEQETIIYSPTKALVPV-GSMELSDFVAPIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQLPTIVVV
        ++SSSK KN++++   +E+ETI+ SP  ALVPV  S E S+FVAPIVS +NDRIRPLIDVVDKLR LNIMKEGIQLPTIVVV
Subjt:  TRSSSKNKNRRVSEIPNEQETIIYSPTKALVPV-GSMELSDFVAPIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQLPTIVVV

A0A6J1CE52 LOW QUALITY PROTEIN: dynamin-related protein 4C-like3.4e-1268.35Show/hide
Query:  SSKNKNRRVSEIPNEQETIIYSPTKALVPVGS-MELSDFVAPIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQLPTIVVV
        S+KNK    S +PNEQE        A+V VGS  +    VAPIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQL TIVVV
Subjt:  SSKNKNRRVSEIPNEQETIIYSPTKALVPVGS-MELSDFVAPIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQLPTIVVV

A0A6J1CE52 LOW QUALITY PROTEIN: dynamin-related protein 4C-like3.2e-1531.25Show/hide
Query:  VAPIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQLPTIVVV--------------------------------------EAMTAFIRIIGS----------
        VAP+VSSY +RIRP++D ++ LR LNI KEGIQLPTIVVV                                      E    + ++IGS          
Subjt:  VAPIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQLPTIVVV--------------------------------------EAMTAFIRIIGS----------

Query:  -AKESLKNILVRARIVHKTSGWKFSSENHDSRVWGSGSGRDSSVRTTSSSGVRSENENDGLL-EDRSEEIVNELLGPGGVGIEKMLEESPNLAVKRDKLN
         + +++ N     ++ H T       +  D +   +   +    R   ++ +  +     LL +D   +++ +++ P G GIE++ EE+P++AV+RD LN
Subjt:  -AKESLKNILVRARIVHKTSGWKFSSENHDSRVWGSGSGRDSSVRTTSSSGVRSENENDGLL-EDRSEEIVNELLGPGGVGIEKMLEESPNLAVKRDKLN

Query:  RSIGRLRDSKEVVANILDRIATFA
        RSI  L++SKEVVA+I+D+I+T+A
Subjt:  RSIGRLRDSKEVVANILDRIATFA

SwissProt top hitse value%identityAlignment
Q9ZP55 Dynamin-related protein 4C3.6e-1161.67Show/hide
Query:  SPTKALVPVGSMELSDFV---APIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQLPTIVVV
        SP+ A+    S    D V   API+SSYNDRIRPL+D VD+LR+LN+M+EGI LPTIVVV
Subjt:  SPTKALVPVGSMELSDFV---APIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQLPTIVVV

Q9ZP55 Dynamin-related protein 4C4.5e-0654.72Show/hide
Query:  EEIVNELLGP-GGVGIEKMLEESPNLAVKRDKLNRSIGRLRDSKEVVANILDR
        +EIV E++ P  G G+EKMLEESP +A KR+KL  SI  L++SK+ VA I+D+
Subjt:  EEIVNELLGP-GGVGIEKMLEESPNLAVKRDKLNRSIGRLRDSKEVVANILDR

Q9ZP56 Putative dynamin-related protein 4A2.7e-1184.62Show/hide
Query:  APIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQLPTIVVV
        APIVSSYNDRIRPL+D VD+LR+LN+M+EGIQLPTIVVV
Subjt:  APIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQLPTIVVV

Arabidopsis top hitse value%identityAlignment
AT1G60500.1 Dynamin related protein 4C2.5e-1261.67Show/hide
Query:  SPTKALVPVGSMELSDFV---APIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQLPTIVVV
        SP+ A+    S    D V   API+SSYNDRIRPL+D VD+LR+LN+M+EGI LPTIVVV
Subjt:  SPTKALVPVGSMELSDFV---APIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQLPTIVVV

AT1G60500.1 Dynamin related protein 4C3.2e-0754.72Show/hide
Query:  EEIVNELLGP-GGVGIEKMLEESPNLAVKRDKLNRSIGRLRDSKEVVANILDR
        +EIV E++ P  G G+EKMLEESP +A KR+KL  SI  L++SK+ VA I+D+
Subjt:  EEIVNELLGP-GGVGIEKMLEESPNLAVKRDKLNRSIGRLRDSKEVVANILDR

AT1G60530.1 Dynamin related protein 4A1.9e-1284.62Show/hide
Query:  APIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQLPTIVVV
        APIVSSYNDRIRPL+D VD+LR+LN+M+EGIQLPTIVVV
Subjt:  APIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQLPTIVVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCACTGCAACTAGGTCTTCCTCTAAGAATAAGAACAGGAGAGTCTCTGAAATTCCCAACGAACAAGAAACCATCATCTATTCACCTACAAAAGCTCTTGTACC
TGTAGGCTCAATGGAGCTTTCTGATTTCGTCGCTCCCATTGTTTCATCCTACAACGACCGAATTCGGCCGCTGATCGATGTTGTTGACAAACTCCGTCATCTCAACATAA
TGAAAGAAGGGATTCAGCTCCCCACCATTGTCGTTGTTGAGGCAATGACGGCTTTTATACGGATTATTGGATCCGCGAAAGAAAGTTTGAAGAACATTCTAGTGAGAGCA
AGAATCGTTCATAAAACAAGTGGTTGGAAATTCAGCTCCGAAAATCACGATTCAAGGGTTTGGGGAAGTGGAAGTGGGAGGGATTCGTCAGTACGAACAACTTCTTCCTC
AGGCGTTCGATCTGAGAATGAGAATGACGGCCTACTGGAAGATCGTTCTGAAGAGATCGTGAATGAACTATTGGGACCCGGCGGCGTTGGGATAGAGAAAATGTTGGAGG
AATCTCCCAACCTTGCCGTGAAAAGGGATAAACTCAATCGGAGCATTGGGCGGCTCCGGGATTCCAAAGAGGTGGTTGCCAACATTCTTGATCGGATTGCAACTTTTGCG
GGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCACTGCAACTAGGTCTTCCTCTAAGAATAAGAACAGGAGAGTCTCTGAAATTCCCAACGAACAAGAAACCATCATCTATTCACCTACAAAAGCTCTTGTACC
TGTAGGCTCAATGGAGCTTTCTGATTTCGTCGCTCCCATTGTTTCATCCTACAACGACCGAATTCGGCCGCTGATCGATGTTGTTGACAAACTCCGTCATCTCAACATAA
TGAAAGAAGGGATTCAGCTCCCCACCATTGTCGTTGTTGAGGCAATGACGGCTTTTATACGGATTATTGGATCCGCGAAAGAAAGTTTGAAGAACATTCTAGTGAGAGCA
AGAATCGTTCATAAAACAAGTGGTTGGAAATTCAGCTCCGAAAATCACGATTCAAGGGTTTGGGGAAGTGGAAGTGGGAGGGATTCGTCAGTACGAACAACTTCTTCCTC
AGGCGTTCGATCTGAGAATGAGAATGACGGCCTACTGGAAGATCGTTCTGAAGAGATCGTGAATGAACTATTGGGACCCGGCGGCGTTGGGATAGAGAAAATGTTGGAGG
AATCTCCCAACCTTGCCGTGAAAAGGGATAAACTCAATCGGAGCATTGGGCGGCTCCGGGATTCCAAAGAGGTGGTTGCCAACATTCTTGATCGGATTGCAACTTTTGCG
GGATGA
Protein sequenceShow/hide protein sequence
MAATATRSSSKNKNRRVSEIPNEQETIIYSPTKALVPVGSMELSDFVAPIVSSYNDRIRPLIDVVDKLRHLNIMKEGIQLPTIVVVEAMTAFIRIIGSAKESLKNILVRA
RIVHKTSGWKFSSENHDSRVWGSGSGRDSSVRTTSSSGVRSENENDGLLEDRSEEIVNELLGPGGVGIEKMLEESPNLAVKRDKLNRSIGRLRDSKEVVANILDRIATFA
G