CuGenDBv2

Gene ID	HG10021319
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Exonuclease 1
Genome location	Chr05:7664061..7665513
RNA-Seq Expression	HG10021319
Synteny	HG10021319
Gene Ontology terms	GO:0006281 - DNA repair (biological process) GO:0006310 - DNA recombination (biological process) GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0017108 - 5'-flap endonuclease activity (molecular function) GO:0035312 - 5'-3' exodeoxyribonuclease activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0057080.1 exonuclease 1 [Cucumis melo var. makuwa]

9.0e-138

84.79

Show/hide

Query:  FASLEAKRKFRAPKQSANQPSLRDGSSISAEGPVGPKDSCSPVSTNHCENVEGCLSTYPVRNDNADGFPLSDSCN--QNMVNYKMEEAEHILLQQHTQSI
        FASLEAKRKFRAPKQSANQPS RD  S+SAE PVGP+DSC P S + CENVEG LSTYPVRNDNADGFPLSDSCN  ++MVN K  EAEHILLQQHTQSI
Subjt:  FASLEAKRKFRAPKQSANQPSLRDGSSISAEGPVGPKDSCSPVSTNHCENVEGCLSTYPVRNDNADGFPLSDSCN--QNMVNYKMEEAEHILLQQHTQSI

Query:  HKPCVTLHKRPDSEKFPDTTGEKARKENKRVIVRSSYFKHKPESNDEQENNQKLSDQKNADAAMHEITTPEAASIISNSCDGSITKRKASSNESIQMDNV
        HKPC TLHK+PD EKFPDT GEK RK+NKRVIVRSSYFKHKPESNDE E NQKLS+QKNA  AMHEITTPE  S ISNSCD +I KRKAS NESIQMDNV
Subjt:  HKPCVTLHKRPDSEKFPDTTGEKARKENKRVIVRSSYFKHKPESNDEQENNQKLSDQKNADAAMHEITTPEAASIISNSCDGSITKRKASSNESIQMDNV

Query:  KTKHLRKDTLQPDHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERFVSVISSFRFASGSRASGLRAPLRDVQNSNTNRSTAAMDLSQFAYVPNKHRN
        KTKHL KDTLQPD DETV ET TEE KFGSNISHLSHYSDIAEKSMERFVSVISSFRF+SGSRASGLRAP RDVQNS TNRSTAAMD SQFAYVPNKHR+
Subjt:  KTKHLRKDTLQPDHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERFVSVISSFRFASGSRASGLRAPLRDVQNSNTNRSTAAMDLSQFAYVPNKHRN

Query:  PLPFRKGRR
        PLPFRKGRR
Subjt:  PLPFRKGRR

XP_008443763.1 PREDICTED: exonuclease 1 [Cucumis melo]

6.9e-138

85.11

Show/hide

Query:  FASLEAKRKFRAPKQSANQPSLRDGSSISAEGPVGPKDSCSPVSTNHCENVEGCLSTYPVRNDNADGFPLSDSCN--QNMVNYKMEEAEHILLQQHTQSI
        FASLEAKRKFRAPKQSANQPS RD  SISAE PVGP+DSC P S + CENVEG LSTYPVRNDNADGFPLSDSCN  ++MVN K  EAEHILLQQHTQSI
Subjt:  FASLEAKRKFRAPKQSANQPSLRDGSSISAEGPVGPKDSCSPVSTNHCENVEGCLSTYPVRNDNADGFPLSDSCN--QNMVNYKMEEAEHILLQQHTQSI

Query:  HKPCVTLHKRPDSEKFPDTTGEKARKENKRVIVRSSYFKHKPESNDEQENNQKLSDQKNADAAMHEITTPEAASIISNSCDGSITKRKASSNESIQMDNV
        HKPC TLHK+PD EKFPDT GEK RK+NKRVIVRSSYFKHKPESNDE E NQKLS+QKNA  AMHEITTPE  S ISNSCD +I KRKAS NESIQMDNV
Subjt:  HKPCVTLHKRPDSEKFPDTTGEKARKENKRVIVRSSYFKHKPESNDEQENNQKLSDQKNADAAMHEITTPEAASIISNSCDGSITKRKASSNESIQMDNV

Query:  KTKHLRKDTLQPDHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERFVSVISSFRFASGSRASGLRAPLRDVQNSNTNRSTAAMDLSQFAYVPNKHRN
        KTKHL KDTLQPD DETV ET TEE KFGSNISHLSHYSDIAEKSMERFVSVISSFRF+SGSRASGLRAP RDVQNS TNRSTAAMD SQFAYVPNKHR+
Subjt:  KTKHLRKDTLQPDHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERFVSVISSFRFASGSRASGLRAPLRDVQNSNTNRSTAAMDLSQFAYVPNKHRN

Query:  PLPFRKGRR
        PLPFRKGRR
Subjt:  PLPFRKGRR

XP_011657503.1 exonuclease 1 [Cucumis sativus]

6.9e-138

84.47

Show/hide

Query:  FASLEAKRKFRAPKQSANQPSLRDGSSISAEGPVGPKDSCSPVSTNHCENVEGCLSTYPVRNDNADGFPLSDSCN--QNMVNYKMEEAEHILLQQHTQSI
        FASLEAKRKF APKQSA+QPSLR   SISA+ P+GP+DSC P ST+ CENVEG L TYPVRNDNADGFPLSDS N  ++MVN K  EAEHILLQQHTQSI
Subjt:  FASLEAKRKFRAPKQSANQPSLRDGSSISAEGPVGPKDSCSPVSTNHCENVEGCLSTYPVRNDNADGFPLSDSCN--QNMVNYKMEEAEHILLQQHTQSI

Query:  HKPCVTLHKRPDSEKFPDTTGEKARKENKRVIVRSSYFKHKPESNDEQENNQKLSDQKNADAAMHEITTPEAASIISNSCDGSITKRKASSNESIQMDNV
        HKPC TLHKRPD EKF DT GEK RK+NKRVI+RSSYFKHKPESNDE E NQKL+DQKNA  A+HEITTPE AS ISNSCD +ITKRKAS NESIQMDNV
Subjt:  HKPCVTLHKRPDSEKFPDTTGEKARKENKRVIVRSSYFKHKPESNDEQENNQKLSDQKNADAAMHEITTPEAASIISNSCDGSITKRKASSNESIQMDNV

Query:  KTKHLRKDTLQPDHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERFVSVISSFRFASGSRASGLRAPLRDVQNSNTNRSTAAMDLSQFAYVPNKHRN
        KTKHL KDT+QPDHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERFVSVISSFRFASGSRASGLRAPL+DVQNS TNRST+AMD SQFAYVPNKHR+
Subjt:  KTKHLRKDTLQPDHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERFVSVISSFRFASGSRASGLRAPLRDVQNSNTNRSTAAMDLSQFAYVPNKHRN

Query:  PLPFRKGRR
        PLPFRKGRR
Subjt:  PLPFRKGRR

XP_038894033.1 exonuclease 1 isoform X1 [Benincasa hispida]

1.4e-138

85.76

Show/hide

Query:  FASLEAKRKFRAPKQSANQPSLRDGSSISAEGPVGPKDSCSPVSTNHCENVEGCLSTYPVRNDNADGFPLSDSCNQN--MVNYKMEEAEHILLQQHTQSI
        FASLEAKRKFRAPKQSANQPS RD SS+S E PVGP+DSC   S NHCENVEGCLSTYPVRN NADG PLSDSCNQN  MVN KME  EHILLQQHTQSI
Subjt:  FASLEAKRKFRAPKQSANQPSLRDGSSISAEGPVGPKDSCSPVSTNHCENVEGCLSTYPVRNDNADGFPLSDSCNQN--MVNYKMEEAEHILLQQHTQSI

Query:  HKPCVTLHKRPDSEKFPDTTGEKARKENKRVIVRSSYFKHKPESNDEQENNQKLSDQKNADAAMHEITTPEAASIISNSCDGSITKRKASSNESIQMDNV
        HKPCVT HK+PD EKFPDTTGE+ RKENKRVIVRSSYFKHKPESNDEQ++NQKLSDQKNA AAM EITTPE AS ISNSCD SITKRK S NESIQMDNV
Subjt:  HKPCVTLHKRPDSEKFPDTTGEKARKENKRVIVRSSYFKHKPESNDEQENNQKLSDQKNADAAMHEITTPEAASIISNSCDGSITKRKASSNESIQMDNV

Query:  KTKHLRKDTLQPDHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERFVSVISSFRFASGSRASGLRAPLRDVQNSNTNRSTAAMDLSQFAYVPNKHRN
        KTKHL K+TLQ DHDETVL  KTEEGKFGSNISHLSHYSDIAEKSMERFVSVISSF F SGSRASGLRAPLRDVQNSN+ RST AMD SQFAYVPNKHR+
Subjt:  KTKHLRKDTLQPDHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERFVSVISSFRFASGSRASGLRAPLRDVQNSNTNRSTAAMDLSQFAYVPNKHRN

Query:  PLPFRKGRR
        PL FRKGRR
Subjt:  PLPFRKGRR

XP_038894034.1 exonuclease 1 isoform X2 [Benincasa hispida]

2.4e-135

84.79

Show/hide

Query:  FASLEAKRKFRAPKQSANQPSLRDGSSISAEGPVGPKDSCSPVSTNHCENVEGCLSTYPVRNDNADGFPLSDSCNQN--MVNYKMEEAEHILLQQHTQSI
        FASLEAKRKFRAPKQSANQPS RD SS+S E PVGP+DSC   S NHCENVEGCLSTYPVRN NADG PLSDSCNQN  MVN KME  EHILLQQHTQSI
Subjt:  FASLEAKRKFRAPKQSANQPSLRDGSSISAEGPVGPKDSCSPVSTNHCENVEGCLSTYPVRNDNADGFPLSDSCNQN--MVNYKMEEAEHILLQQHTQSI

Query:  HKPCVTLHKRPDSEKFPDTTGEKARKENKRVIVRSSYFKHKPESNDEQENNQKLSDQKNADAAMHEITTPEAASIISNSCDGSITKRKASSNESIQMDNV
        HKPCVT HK+PD EKFPDTTGE+ RKENKRVIVRSSYFKHKPESNDEQ++NQKLSDQKNA AAM EITTPE AS ISNSCD SITKRK S NESIQMDNV
Subjt:  HKPCVTLHKRPDSEKFPDTTGEKARKENKRVIVRSSYFKHKPESNDEQENNQKLSDQKNADAAMHEITTPEAASIISNSCDGSITKRKASSNESIQMDNV

Query:  KTKHLRKDTLQPDHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERFVSVISSFRFASGSRASGLRAPLRDVQNSNTNRSTAAMDLSQFAYVPNKHRN
        KTKHL K+TLQ DH   VL  KTEEGKFGSNISHLSHYSDIAEKSMERFVSVISSF F SGSRASGLRAPLRDVQNSN+ RST AMD SQFAYVPNKHR+
Subjt:  KTKHLRKDTLQPDHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERFVSVISSFRFASGSRASGLRAPLRDVQNSNTNRSTAAMDLSQFAYVPNKHRN

Query:  PLPFRKGRR
        PL FRKGRR
Subjt:  PLPFRKGRR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LXN5 Exonuclease 1

3.3e-138

84.47

Show/hide

Query:  FASLEAKRKFRAPKQSANQPSLRDGSSISAEGPVGPKDSCSPVSTNHCENVEGCLSTYPVRNDNADGFPLSDSCN--QNMVNYKMEEAEHILLQQHTQSI
        FASLEAKRKF APKQSA+QPSLR   SISA+ P+GP+DSC P ST+ CENVEG L TYPVRNDNADGFPLSDS N  ++MVN K  EAEHILLQQHTQSI
Subjt:  FASLEAKRKFRAPKQSANQPSLRDGSSISAEGPVGPKDSCSPVSTNHCENVEGCLSTYPVRNDNADGFPLSDSCN--QNMVNYKMEEAEHILLQQHTQSI

Query:  HKPCVTLHKRPDSEKFPDTTGEKARKENKRVIVRSSYFKHKPESNDEQENNQKLSDQKNADAAMHEITTPEAASIISNSCDGSITKRKASSNESIQMDNV
        HKPC TLHKRPD EKF DT GEK RK+NKRVI+RSSYFKHKPESNDE E NQKL+DQKNA  A+HEITTPE AS ISNSCD +ITKRKAS NESIQMDNV
Subjt:  HKPCVTLHKRPDSEKFPDTTGEKARKENKRVIVRSSYFKHKPESNDEQENNQKLSDQKNADAAMHEITTPEAASIISNSCDGSITKRKASSNESIQMDNV

Query:  KTKHLRKDTLQPDHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERFVSVISSFRFASGSRASGLRAPLRDVQNSNTNRSTAAMDLSQFAYVPNKHRN
        KTKHL KDT+QPDHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERFVSVISSFRFASGSRASGLRAPL+DVQNS TNRST+AMD SQFAYVPNKHR+
Subjt:  KTKHLRKDTLQPDHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERFVSVISSFRFASGSRASGLRAPLRDVQNSNTNRSTAAMDLSQFAYVPNKHRN

Query:  PLPFRKGRR
        PLPFRKGRR
Subjt:  PLPFRKGRR

A0A1S3B8V0 Exonuclease 1

3.3e-138

85.11

Show/hide

Query:  FASLEAKRKFRAPKQSANQPSLRDGSSISAEGPVGPKDSCSPVSTNHCENVEGCLSTYPVRNDNADGFPLSDSCN--QNMVNYKMEEAEHILLQQHTQSI
        FASLEAKRKFRAPKQSANQPS RD  SISAE PVGP+DSC P S + CENVEG LSTYPVRNDNADGFPLSDSCN  ++MVN K  EAEHILLQQHTQSI
Subjt:  FASLEAKRKFRAPKQSANQPSLRDGSSISAEGPVGPKDSCSPVSTNHCENVEGCLSTYPVRNDNADGFPLSDSCN--QNMVNYKMEEAEHILLQQHTQSI

Query:  HKPCVTLHKRPDSEKFPDTTGEKARKENKRVIVRSSYFKHKPESNDEQENNQKLSDQKNADAAMHEITTPEAASIISNSCDGSITKRKASSNESIQMDNV
        HKPC TLHK+PD EKFPDT GEK RK+NKRVIVRSSYFKHKPESNDE E NQKLS+QKNA  AMHEITTPE  S ISNSCD +I KRKAS NESIQMDNV
Subjt:  HKPCVTLHKRPDSEKFPDTTGEKARKENKRVIVRSSYFKHKPESNDEQENNQKLSDQKNADAAMHEITTPEAASIISNSCDGSITKRKASSNESIQMDNV

Query:  KTKHLRKDTLQPDHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERFVSVISSFRFASGSRASGLRAPLRDVQNSNTNRSTAAMDLSQFAYVPNKHRN
        KTKHL KDTLQPD DETV ET TEE KFGSNISHLSHYSDIAEKSMERFVSVISSFRF+SGSRASGLRAP RDVQNS TNRSTAAMD SQFAYVPNKHR+
Subjt:  KTKHLRKDTLQPDHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERFVSVISSFRFASGSRASGLRAPLRDVQNSNTNRSTAAMDLSQFAYVPNKHRN

Query:  PLPFRKGRR
        PLPFRKGRR
Subjt:  PLPFRKGRR

A0A5A7UPP2 Exonuclease 1

4.3e-138

84.79

Show/hide

Query:  FASLEAKRKFRAPKQSANQPSLRDGSSISAEGPVGPKDSCSPVSTNHCENVEGCLSTYPVRNDNADGFPLSDSCN--QNMVNYKMEEAEHILLQQHTQSI
        FASLEAKRKFRAPKQSANQPS RD  S+SAE PVGP+DSC P S + CENVEG LSTYPVRNDNADGFPLSDSCN  ++MVN K  EAEHILLQQHTQSI
Subjt:  FASLEAKRKFRAPKQSANQPSLRDGSSISAEGPVGPKDSCSPVSTNHCENVEGCLSTYPVRNDNADGFPLSDSCN--QNMVNYKMEEAEHILLQQHTQSI

Query:  HKPCVTLHKRPDSEKFPDTTGEKARKENKRVIVRSSYFKHKPESNDEQENNQKLSDQKNADAAMHEITTPEAASIISNSCDGSITKRKASSNESIQMDNV
        HKPC TLHK+PD EKFPDT GEK RK+NKRVIVRSSYFKHKPESNDE E NQKLS+QKNA  AMHEITTPE  S ISNSCD +I KRKAS NESIQMDNV
Subjt:  HKPCVTLHKRPDSEKFPDTTGEKARKENKRVIVRSSYFKHKPESNDEQENNQKLSDQKNADAAMHEITTPEAASIISNSCDGSITKRKASSNESIQMDNV

Query:  KTKHLRKDTLQPDHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERFVSVISSFRFASGSRASGLRAPLRDVQNSNTNRSTAAMDLSQFAYVPNKHRN
        KTKHL KDTLQPD DETV ET TEE KFGSNISHLSHYSDIAEKSMERFVSVISSFRF+SGSRASGLRAP RDVQNS TNRSTAAMD SQFAYVPNKHR+
Subjt:  KTKHLRKDTLQPDHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERFVSVISSFRFASGSRASGLRAPLRDVQNSNTNRSTAAMDLSQFAYVPNKHRN

Query:  PLPFRKGRR
        PLPFRKGRR
Subjt:  PLPFRKGRR

A0A6J1CDT9 Exonuclease 1

3.8e-118

77.42

Show/hide

Query:  FASLEAKRKFRAPKQSANQPSLRDGSSISAEGPVGPKDSCSPVS-TNHCENVEGCLSTYPVRNDNADGFPLSDSCNQ--NMVNYKMEEAEHILLQQHTQS
        FASLEAKRKFRAPK SAN P+ RD  S+  E  VG +DSC P S T+H  + EGCLSTYPVRNDNA G PLSDS ++  +MVN   EE EHILLQQ TQS
Subjt:  FASLEAKRKFRAPKQSANQPSLRDGSSISAEGPVGPKDSCSPVS-TNHCENVEGCLSTYPVRNDNADGFPLSDSCNQ--NMVNYKMEEAEHILLQQHTQS

Query:  IHKPCVTLHKRPDSEKFPDTTGEKARKENKRVIVRSSYFKHKPESNDEQENNQKLSDQKNADAAMHEITTPEAASIISNSCDGSITKRKASSNESIQMDN
        IHKPC+TLHK PD E  PDT GEK RKENKR+IVRSSYFKHK ESNDEQE+NQKLSDQ NA   MHE TT E AS  SNS D SITKRKAS NE+IQ+DN
Subjt:  IHKPCVTLHKRPDSEKFPDTTGEKARKENKRVIVRSSYFKHKPESNDEQENNQKLSDQKNADAAMHEITTPEAASIISNSCDGSITKRKASSNESIQMDN

Query:  VKTKHLRKDTLQPDHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERFVSVISSFRFASGSRASGLRAPLRDVQNSNTNRSTA-AMDLSQFAYVPNKH
        +KTKHL KDTL P HDETVL+TKTEEGKFGSNISHLSHYSDIAEKSME+FVSVISSFRF+SGSRASGLRAPLRDVQN+NTNRS A AMDLSQFAYVPNKH
Subjt:  VKTKHLRKDTLQPDHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERFVSVISSFRFASGSRASGLRAPLRDVQNSNTNRSTA-AMDLSQFAYVPNKH

Query:  RNPLPFRKGR
        R PL FRKGR
Subjt:  RNPLPFRKGR

A0A6J1CEH7 Exonuclease 1

3.8e-118

77.42

Show/hide

Query:  FASLEAKRKFRAPKQSANQPSLRDGSSISAEGPVGPKDSCSPVS-TNHCENVEGCLSTYPVRNDNADGFPLSDSCNQ--NMVNYKMEEAEHILLQQHTQS
        FASLEAKRKFRAPK SAN P+ RD  S+  E  VG +DSC P S T+H  + EGCLSTYPVRNDNA G PLSDS ++  +MVN   EE EHILLQQ TQS
Subjt:  FASLEAKRKFRAPKQSANQPSLRDGSSISAEGPVGPKDSCSPVS-TNHCENVEGCLSTYPVRNDNADGFPLSDSCNQ--NMVNYKMEEAEHILLQQHTQS

Query:  IHKPCVTLHKRPDSEKFPDTTGEKARKENKRVIVRSSYFKHKPESNDEQENNQKLSDQKNADAAMHEITTPEAASIISNSCDGSITKRKASSNESIQMDN
        IHKPC+TLHK PD E  PDT GEK RKENKR+IVRSSYFKHK ESNDEQE+NQKLSDQ NA   MHE TT E AS  SNS D SITKRKAS NE+IQ+DN
Subjt:  IHKPCVTLHKRPDSEKFPDTTGEKARKENKRVIVRSSYFKHKPESNDEQENNQKLSDQKNADAAMHEITTPEAASIISNSCDGSITKRKASSNESIQMDN

Query:  VKTKHLRKDTLQPDHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERFVSVISSFRFASGSRASGLRAPLRDVQNSNTNRSTA-AMDLSQFAYVPNKH
        +KTKHL KDTL P HDETVL+TKTEEGKFGSNISHLSHYSDIAEKSME+FVSVISSFRF+SGSRASGLRAPLRDVQN+NTNRS A AMDLSQFAYVPNKH
Subjt:  VKTKHLRKDTLQPDHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERFVSVISSFRFASGSRASGLRAPLRDVQNSNTNRSTA-AMDLSQFAYVPNKH

Query:  RNPLPFRKGR
        R PL FRKGR
Subjt:  RNPLPFRKGR

SwissProt top hits

e value

%identity

Alignment

Q60GC1 Exonuclease 1

4.6e-12

Show/hide

Query:  ASLEAKRKFRAPKQSANQ-----------------PSLRDGSSISAEG----PVGPKDSCSPVSTNHCENVEGCLSTYPVRND--NADGFPLSDSCNQNM
        ASLEAKRKFRAPK +  Q                 P L + +S+ +          +   S    +   N     S+  VR D    D   +S  C+ ++
Subjt:  ASLEAKRKFRAPKQSANQ-----------------PSLRDGSSISAEG----PVGPKDSCSPVSTNHCENVEGCLSTYPVRND--NADGFPLSDSCNQNM

Query:  VNYKMEEAE------------------HILLQQHTQSIHKPCVTLHKRPDSEKFPDTTGEKAR--KENKRVIVRSSYFKHKPESNDEQENNQKLSDQKNA
         +   E+ +                     L+     I  P +  H    S   P    EK+     N+ + VRSSYFK   +     +   +  D+ N 
Subjt:  VNYKMEEAE------------------HILLQQHTQSIHKPCVTLHKRPDSEKFPDTTGEKAR--KENKRVIVRSSYFKHKPESNDEQENNQKLSDQKNA

Query:  DAAMHEITTPEAASIISNSCDGSITKRKASSNESIQ--MDNVKTKHLRKDTLQP--DHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERFVSVISSF
        +   + +   +       S  G + +RK S  ++ +  M    + H          D D         EGKFG N++H++ YS IAEKSM++F ++ISSF
Subjt:  DAAMHEITTPEAASIISNSCDGSITKRKASSNESIQ--MDNVKTKHLRKDTLQP--DHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERFVSVISSF

Query:  RFASGSRASGLRAPLRDVQNSNTNRSTAAMDLSQFAYVPNK-HRNPLPFR
        R+A GSRASGLRAPL+DV+N+   RS       +F     K  R PL  R
Subjt:  RFASGSRASGLRAPLRDVQNSNTNRSTAAMDLSQFAYVPNK-HRNPLPFR

Q8L6Z7 Exonuclease 1

2.4e-24

31.82

Show/hide

Query:  FASLEAKRKFRAPKQSANQPSLRDGSSISAEGPVGPKDSCSPVSTN----HCENVEGCLSTYPVRNDNADGFPLSDS--------CNQNMVNYKMEEAEH
        FAS+EAKRKF+AP+ S    +  D S    +      D+ S  +TN    +      C+S    + D+ D   +  +        C + +   K +  + 
Subjt:  FASLEAKRKFRAPKQSANQPSLRDGSSISAEGPVGPKDSCSPVSTN----HCENVEGCLSTYPVRNDNADGFPLSDS--------CNQNMVNYKMEEAEH

Query:  ILLQQH----------TQSIH--KPCVTLHKRPDSEKFPDTTGEKARKENKRVIVRSSYFKHKPESNDEQE-----------------NNQKLSDQKNAD
        I+  ++           QSI     C  + +R   +   + +    R+E+ R I  S    H    ND ++                 N  K++ Q N +
Subjt:  ILLQQH----------TQSIH--KPCVTLHKRPDSEKFPDTTGEKARKENKRVIVRSSYFKHKPESNDEQE-----------------NNQKLSDQKNAD

Query:  AAMHEITTPEA----------ASIISNSCDGSIT-KRKASSNESIQMDNVKTKHLRKD-TLQPDHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERF
             +  P A          +SI  +SC G  T KRK  S+E++  +N+K+KH+R D T    + ET LET   E KFGSNISH+ HYS+IAEKS+ERF
Subjt:  AAMHEITTPEA----------ASIISNSCDGSIT-KRKASSNESIQMDNVKTKHLRKD-TLQPDHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERF

Query:  VSVISSFRFA-SGSRASGLRAPLRDVQNSNTNRSTAAM-DLSQFAYV-PNKH
        VS ISSF+++ +GSRASGLRAPL+D++N+  ++  +   D+S+F Y   N+H
Subjt:  VSVISSFRFA-SGSRASGLRAPLRDVQNSNTNRSTAAM-DLSQFAYV-PNKH

Arabidopsis top hits

e value

%identity

Alignment

AT1G29630.1 5'-3' exonuclease family protein

1.7e-25

31.82

Show/hide

Query:  FASLEAKRKFRAPKQSANQPSLRDGSSISAEGPVGPKDSCSPVSTN----HCENVEGCLSTYPVRNDNADGFPLSDS--------CNQNMVNYKMEEAEH
        FAS+EAKRKF+AP+ S    +  D S    +      D+ S  +TN    +      C+S    + D+ D   +  +        C + +   K +  + 
Subjt:  FASLEAKRKFRAPKQSANQPSLRDGSSISAEGPVGPKDSCSPVSTN----HCENVEGCLSTYPVRNDNADGFPLSDS--------CNQNMVNYKMEEAEH

Query:  ILLQQH----------TQSIH--KPCVTLHKRPDSEKFPDTTGEKARKENKRVIVRSSYFKHKPESNDEQE-----------------NNQKLSDQKNAD
        I+  ++           QSI     C  + +R   +   + +    R+E+ R I  S    H    ND ++                 N  K++ Q N +
Subjt:  ILLQQH----------TQSIH--KPCVTLHKRPDSEKFPDTTGEKARKENKRVIVRSSYFKHKPESNDEQE-----------------NNQKLSDQKNAD

Query:  AAMHEITTPEA----------ASIISNSCDGSIT-KRKASSNESIQMDNVKTKHLRKD-TLQPDHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERF
             +  P A          +SI  +SC G  T KRK  S+E++  +N+K+KH+R D T    + ET LET   E KFGSNISH+ HYS+IAEKS+ERF
Subjt:  AAMHEITTPEA----------ASIISNSCDGSIT-KRKASSNESIQMDNVKTKHLRKD-TLQPDHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERF

Query:  VSVISSFRFA-SGSRASGLRAPLRDVQNSNTNRSTAAM-DLSQFAYV-PNKH
        VS ISSF+++ +GSRASGLRAPL+D++N+  ++  +   D+S+F Y   N+H
Subjt:  VSVISSFRFA-SGSRASGLRAPLRDVQNSNTNRSTAAM-DLSQFAYV-PNKH

AT1G29630.2 5'-3' exonuclease family protein

1.7e-25

31.82

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Query:  FASLEAKRKFRAPKQSANQPSLRDGSSISAEGPVGPKDSCSPVSTN----HCENVEGCLSTYPVRNDNADGFPLSDS--------CNQNMVNYKMEEAEH
        FAS+EAKRKF+AP+ S    +  D S    +      D+ S  +TN    +      C+S    + D+ D   +  +        C + +   K +  + 
Subjt:  FASLEAKRKFRAPKQSANQPSLRDGSSISAEGPVGPKDSCSPVSTN----HCENVEGCLSTYPVRNDNADGFPLSDS--------CNQNMVNYKMEEAEH

Query:  ILLQQH----------TQSIH--KPCVTLHKRPDSEKFPDTTGEKARKENKRVIVRSSYFKHKPESNDEQE-----------------NNQKLSDQKNAD
        I+  ++           QSI     C  + +R   +   + +    R+E+ R I  S    H    ND ++                 N  K++ Q N +
Subjt:  ILLQQH----------TQSIH--KPCVTLHKRPDSEKFPDTTGEKARKENKRVIVRSSYFKHKPESNDEQE-----------------NNQKLSDQKNAD

Query:  AAMHEITTPEA----------ASIISNSCDGSIT-KRKASSNESIQMDNVKTKHLRKD-TLQPDHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERF
             +  P A          +SI  +SC G  T KRK  S+E++  +N+K+KH+R D T    + ET LET   E KFGSNISH+ HYS+IAEKS+ERF
Subjt:  AAMHEITTPEA----------ASIISNSCDGSIT-KRKASSNESIQMDNVKTKHLRKD-TLQPDHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERF

Query:  VSVISSFRFA-SGSRASGLRAPLRDVQNSNTNRSTAAM-DLSQFAYV-PNKH
        VS ISSF+++ +GSRASGLRAPL+D++N+  ++  +   D+S+F Y   N+H
Subjt:  VSVISSFRFA-SGSRASGLRAPLRDVQNSNTNRSTAAM-DLSQFAYV-PNKH

AT1G29630.3 5'-3' exonuclease family protein

1.7e-25

31.82

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Query:  FASLEAKRKFRAPKQSANQPSLRDGSSISAEGPVGPKDSCSPVSTN----HCENVEGCLSTYPVRNDNADGFPLSDS--------CNQNMVNYKMEEAEH
        FAS+EAKRKF+AP+ S    +  D S    +      D+ S  +TN    +      C+S    + D+ D   +  +        C + +   K +  + 
Subjt:  FASLEAKRKFRAPKQSANQPSLRDGSSISAEGPVGPKDSCSPVSTN----HCENVEGCLSTYPVRNDNADGFPLSDS--------CNQNMVNYKMEEAEH

Query:  ILLQQH----------TQSIH--KPCVTLHKRPDSEKFPDTTGEKARKENKRVIVRSSYFKHKPESNDEQE-----------------NNQKLSDQKNAD
        I+  ++           QSI     C  + +R   +   + +    R+E+ R I  S    H    ND ++                 N  K++ Q N +
Subjt:  ILLQQH----------TQSIH--KPCVTLHKRPDSEKFPDTTGEKARKENKRVIVRSSYFKHKPESNDEQE-----------------NNQKLSDQKNAD

Query:  AAMHEITTPEA----------ASIISNSCDGSIT-KRKASSNESIQMDNVKTKHLRKD-TLQPDHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERF
             +  P A          +SI  +SC G  T KRK  S+E++  +N+K+KH+R D T    + ET LET   E KFGSNISH+ HYS+IAEKS+ERF
Subjt:  AAMHEITTPEA----------ASIISNSCDGSIT-KRKASSNESIQMDNVKTKHLRKD-TLQPDHDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERF

Query:  VSVISSFRFA-SGSRASGLRAPLRDVQNSNTNRSTAAM-DLSQFAYV-PNKH
        VS ISSF+++ +GSRASGLRAPL+D++N+  ++  +   D+S+F Y   N+H
Subjt:  VSVISSFRFA-SGSRASGLRAPLRDVQNSNTNRSTAAM-DLSQFAYV-PNKH

Sequences

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CDS sequence

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ATGTATTTCTTAACACTAAAGAAAGGCTTTGCTTCTCTCGAGGCAAAGAGAAAATTTAGGGCGCCAAAACAATCAGCTAATCAACCAAGCTTAAGGGATGGCTCCTCAAT
TAGTGCCGAGGGGCCGGTTGGTCCTAAAGATAGTTGCTCGCCAGTTTCTACCAATCACTGTGAAAATGTAGAAGGCTGTCTATCTACTTATCCTGTAAGAAATGATAATG
CAGATGGATTTCCTCTTTCTGATTCTTGCAATCAGAATATGGTCAATTATAAAATGGAAGAAGCGGAGCATATTTTACTACAGCAACACACCCAATCAATTCATAAGCCT
TGTGTAACTCTGCATAAGAGACCCGATTCTGAGAAGTTTCCTGATACAACTGGAGAAAAAGCTAGGAAAGAGAATAAAAGGGTCATTGTAAGGAGTTCTTACTTCAAGCA
TAAGCCAGAAAGCAATGATGAACAGGAGAACAACCAAAAACTTTCTGACCAGAAAAATGCAGATGCTGCTATGCATGAGATAACCACTCCCGAGGCCGCCTCTATTATTA
GTAATTCTTGTGACGGTTCAATCACTAAAAGGAAAGCCTCTTCAAATGAAAGCATTCAAATGGACAATGTCAAAACTAAGCATTTGCGTAAGGATACATTGCAACCCGAT
CATGATGAAACAGTATTGGAGACAAAAACTGAAGAAGGGAAATTTGGATCCAACATTTCTCATTTAAGTCATTACTCAGACATAGCAGAGAAATCAATGGAACGATTTGT
TTCAGTAATATCATCATTTCGATTTGCTTCGGGTTCTAGAGCCAGTGGTCTCCGAGCCCCTTTGAGAGATGTTCAGAACAGCAATACCAATAGGTCTACTGCTGCAATGG
ACCTCAGCCAATTTGCTTATGTTCCAAATAAGCACAGGAATCCCTTGCCATTCCGAAAAGGAAGACGATGA

mRNA sequence

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Protein sequence

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MYFLTLKKGFASLEAKRKFRAPKQSANQPSLRDGSSISAEGPVGPKDSCSPVSTNHCENVEGCLSTYPVRNDNADGFPLSDSCNQNMVNYKMEEAEHILLQQHTQSIHKP
CVTLHKRPDSEKFPDTTGEKARKENKRVIVRSSYFKHKPESNDEQENNQKLSDQKNADAAMHEITTPEAASIISNSCDGSITKRKASSNESIQMDNVKTKHLRKDTLQPD
HDETVLETKTEEGKFGSNISHLSHYSDIAEKSMERFVSVISSFRFASGSRASGLRAPLRDVQNSNTNRSTAAMDLSQFAYVPNKHRNPLPFRKGRR

HG10021319 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome