; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10021330 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021330
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptioncold-regulated 413 inner membrane protein 1, chloroplastic-like
Genome locationChr05:7746199..7748092
RNA-Seq ExpressionHG10021330
SyntenyHG10021330
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008892 - Cold-regulated 413 protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147401.1 cold-regulated 413 inner membrane protein 2, chloroplastic [Cucumis sativus]2.6e-7975.98Show/hide
Query:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--
        MVCVSLSSAVSLY PS YKSKLSVPLSLRSS PNAKLS + AAK+SSICYNPL F VGSEG     INKK+SRGLSAVCYAMP+N RTLQW+STISSV  
Subjt:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--

Query:  ------------------------------GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG
                                      GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISLLIAAYLAFQHFSRAG
Subjt:  ------------------------------GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG

Query:  SFRRAFDQNSIVATVAVICVTAVSFLLVI
        SF+RAFDQNSIVATVAV+C+TAVSFL VI
Subjt:  SFRRAFDQNSIVATVAVICVTAVSFLLVI

XP_008443932.1 PREDICTED: cold-regulated 413 inner membrane protein 2, chloroplastic-like [Cucumis melo]1.4e-8277.73Show/hide
Query:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--
        MVCVSLSSAVSLY PS YKSKLSVPLSLRSS PNAKLS + AAK+SSICYNPL F VGSEGIATA INKK++RGLSA CYAMP+N RTLQWVSTISSV  
Subjt:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--

Query:  ------------------------------GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG
                                      GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISLLIAAYLAFQHFSRAG
Subjt:  ------------------------------GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG

Query:  SFRRAFDQNSIVATVAVICVTAVSFLLVI
        SF+RAFDQNSIVATVAVIC+TAVSFL VI
Subjt:  SFRRAFDQNSIVATVAVICVTAVSFLLVI

XP_022994881.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 [Cucurbita maxima]4.1e-7774.67Show/hide
Query:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--
        MVCV LSSA+SL+SP L+KSKLS PLSLRSS PNAKL+F+PAAK+SSIC NP+ F  GS+  +T AINKKR RGLSAVCYAMPL+AR LQW+STISSV  
Subjt:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--

Query:  ------------------------------GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG
                                      GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG+IISLLIAAYLAFQHFSRAG
Subjt:  ------------------------------GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG

Query:  SFRRAFDQNSIVATVAVICVTAVSFLLVI
        SFRRAFDQNSIVATVA+ICVTAVSFLLVI
Subjt:  SFRRAFDQNSIVATVAVICVTAVSFLLVI

XP_023542165.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like, partial [Cucurbita pepo subsp. pepo]1.1e-7773.82Show/hide
Query:  RKGEMVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTIS
        +KGE+VCV LSSA+SL+SP L KSKLS PLSLRSS PNAKL+F+PAAK+ SIC NP+ F  GS+  +T AINKKR RGLSAVCYAMPL+AR LQW+STIS
Subjt:  RKGEMVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTIS

Query:  SV--------------------------------GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHF
        SV                                GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG+IISLLIAAYLAFQHF
Subjt:  SV--------------------------------GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHF

Query:  SRAGSFRRAFDQNSIVATVAVICVTAVSFLLVI
        SRAGSFRRAFDQNSIVATVA+ICVTAVSFLLVI
Subjt:  SRAGSFRRAFDQNSIVATVAVICVTAVSFLLVI

XP_038896035.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like [Benincasa hispida]1.8e-8579.48Show/hide
Query:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--
        MVCVSLSSAVSLY+PSLY+SKLSVPLSLRSS PNAKLSFSPAAK+SSICYNPL F VGSEGIATAAI KKRSRGLSA+CYAMP+NARTLQW+STISS   
Subjt:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--

Query:  ------------------------------GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG
                                      GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQ+LRGTQEG+IISL+IAAYLAFQHFSRAG
Subjt:  ------------------------------GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG

Query:  SFRRAFDQNSIVATVAVICVTAVSFLLVI
        SFRRAFDQNSIVATVAVIC TAVSFLLVI
Subjt:  SFRRAFDQNSIVATVAVICVTAVSFLLVI

TrEMBL top hitse value%identityAlignment
A0A0A0LXM7 Uncharacterized protein1.2e-7975.98Show/hide
Query:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--
        MVCVSLSSAVSLY PS YKSKLSVPLSLRSS PNAKLS + AAK+SSICYNPL F VGSEG     INKK+SRGLSAVCYAMP+N RTLQW+STISSV  
Subjt:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--

Query:  ------------------------------GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG
                                      GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISLLIAAYLAFQHFSRAG
Subjt:  ------------------------------GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG

Query:  SFRRAFDQNSIVATVAVICVTAVSFLLVI
        SF+RAFDQNSIVATVAV+C+TAVSFL VI
Subjt:  SFRRAFDQNSIVATVAVICVTAVSFLLVI

A0A1S3B961 cold-regulated 413 inner membrane protein 2, chloroplastic-like7.0e-8377.73Show/hide
Query:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--
        MVCVSLSSAVSLY PS YKSKLSVPLSLRSS PNAKLS + AAK+SSICYNPL F VGSEGIATA INKK++RGLSA CYAMP+N RTLQWVSTISSV  
Subjt:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--

Query:  ------------------------------GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG
                                      GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISLLIAAYLAFQHFSRAG
Subjt:  ------------------------------GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG

Query:  SFRRAFDQNSIVATVAVICVTAVSFLLVI
        SF+RAFDQNSIVATVAVIC+TAVSFL VI
Subjt:  SFRRAFDQNSIVATVAVICVTAVSFLLVI

A0A5D3DB21 Cold-regulated 413 inner membrane protein 27.0e-8377.73Show/hide
Query:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--
        MVCVSLSSAVSLY PS YKSKLSVPLSLRSS PNAKLS + AAK+SSICYNPL F VGSEGIATA INKK++RGLSA CYAMP+N RTLQWVSTISSV  
Subjt:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--

Query:  ------------------------------GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG
                                      GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISLLIAAYLAFQHFSRAG
Subjt:  ------------------------------GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG

Query:  SFRRAFDQNSIVATVAVICVTAVSFLLVI
        SF+RAFDQNSIVATVAVIC+TAVSFL VI
Subjt:  SFRRAFDQNSIVATVAVICVTAVSFLLVI

A0A6J1CH44 cold-regulated 413 inner membrane protein 1, chloroplastic-like3.4e-7772.93Show/hide
Query:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--
        MVC+SLSSA SL++ SLYK+KLS PLSLRS   +AKLS +PA KRSSICYNPL F VG+EGIATAAINK+RSRGL+ VCYAMPL AR +QW+STIS V  
Subjt:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--

Query:  ------------------------------GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG
                                      GEYGIW+AFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAA+LAFQHFSRAG
Subjt:  ------------------------------GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG

Query:  SFRRAFDQNSIVATVAVICVTAVSFLLVI
        SFRRAFDQNSIVAT AV+CVTA SFLLVI
Subjt:  SFRRAFDQNSIVATVAVICVTAVSFLLVI

A0A6J1K0I6 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X22.0e-7774.67Show/hide
Query:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--
        MVCV LSSA+SL+SP L+KSKLS PLSLRSS PNAKL+F+PAAK+SSIC NP+ F  GS+  +T AINKKR RGLSAVCYAMPL+AR LQW+STISSV  
Subjt:  MVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSV--

Query:  ------------------------------GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG
                                      GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG+IISLLIAAYLAFQHFSRAG
Subjt:  ------------------------------GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG

Query:  SFRRAFDQNSIVATVAVICVTAVSFLLVI
        SFRRAFDQNSIVATVA+ICVTAVSFLLVI
Subjt:  SFRRAFDQNSIVATVAVICVTAVSFLLVI

SwissProt top hitse value%identityAlignment
F4I1G5 Cold-regulated 413 inner membrane protein 2, chloroplastic3.2e-4047.19Show/hide
Query:  VCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIAT--AAINKKRSRGLSAVCYAMP-LNARTLQWVSTISSV
        +C+S S  V     SL+  K  + L LR    N           S +C+NPL  +   +  AT  A   K+R RG S VCYA P L+   LQW+STIS V
Subjt:  VCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIAT--AAINKKRSRGLSAVCYAMP-LNARTLQWVSTISSV

Query:  --------------------------------GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSR
                                        GEYGIW+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV ++RG QEG+I+SL I+ +LAFQHFSR
Subjt:  --------------------------------GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSR

Query:  AGSFRRAFDQNSIVATVAVICVTAVSFLLVI
        AG+ ++AFDQNS++ATVA+I VT VSFL +I
Subjt:  AGSFRRAFDQNSIVATVAVICVTAVSFLLVI

O23164 Cold-regulated 413 plasma membrane protein 41.9e-0838.3Show/hide
Query:  GEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGSIISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAVICV
        G++G W A +A++VRLFF    P  LEIP   +L+V+V+P  +   LR +  G++I L+IA YL  +H   +G F+ +F Q N I  T+ ++ +
Subjt:  GEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGSIISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAVICV

Q94AL8 Cold-regulated 413 inner membrane protein 1, chloroplastic6.4e-4144.78Show/hide
Query:  VCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAA--INKKRSRGLSAVCYAMPLNARTLQWVSTISSV-
        +C+S S  VSL+    +       LSL+  S  + LS       S +C+NPL  +   +  AT +  + K+R RG S VCYA P++A +LQW+STIS + 
Subjt:  VCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAA--INKKRSRGLSAVCYAMPLNARTLQWVSTISSV-

Query:  -------------------------------GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRA
                                       GEYG+W+AFLAL+ RLFF  PGELE+PFI+LLLVIVAPYQV N+RG QEG+II++ I+ +LAFQHFSRA
Subjt:  -------------------------------GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRA

Query:  GSFRRAFDQNSIVATVAVICVTAVSFLLVI
        GS  +A+++ S++ATVA+I VT VS LL++
Subjt:  GSFRRAFDQNSIVATVAVICVTAVSFLLVI

Q9SVL6 Cold-regulated 413 plasma membrane protein 28.4e-0941.98Show/hide
Query:  GEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGSIISLLIAAYLAFQHFSRAGSFRRAFDQ
        G+ G W AF+A+++RLFF    P  LE+P   +LL++V+P +   ++RGT  G++ISL I  YL  +H   +G FR +F Q
Subjt:  GEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGSIISLLIAAYLAFQHFSRAGSFRRAFDQ

Q9XIM7 Cold-regulated 413 plasma membrane protein 13.9e-0640.43Show/hide
Query:  GEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGSIISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAVICV
        GE G W AF+A++V+LFF       LE+P   +LL +VAP  +    R +  G  I L I  YL  +H   +G FR AF + N I  TV +IC+
Subjt:  GEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGSIISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAVICV

Arabidopsis top hitse value%identityAlignment
AT1G29390.1 cold regulated 314 thylakoid membrane 22.2e-4147.19Show/hide
Query:  VCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIAT--AAINKKRSRGLSAVCYAMP-LNARTLQWVSTISSV
        +C+S S  V     SL+  K  + L LR    N           S +C+NPL  +   +  AT  A   K+R RG S VCYA P L+   LQW+STIS V
Subjt:  VCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIAT--AAINKKRSRGLSAVCYAMP-LNARTLQWVSTISSV

Query:  --------------------------------GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSR
                                        GEYGIW+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV ++RG QEG+I+SL I+ +LAFQHFSR
Subjt:  --------------------------------GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSR

Query:  AGSFRRAFDQNSIVATVAVICVTAVSFLLVI
        AG+ ++AFDQNS++ATVA+I VT VSFL +I
Subjt:  AGSFRRAFDQNSIVATVAVICVTAVSFLLVI

AT1G29390.2 cold regulated 314 thylakoid membrane 26.1e-3954.49Show/hide
Query:  TAAINKKRSRGLSAVCYAMP-LNARTLQWVSTISSV--------------------------------GEYGIWSAFLALLVRLFFFIPGELEIPFISLL
        +A   K+R RG S VCYA P L+   LQW+STIS V                                GEYGIW+AFLALL RLFF  P ELE+PFI+LL
Subjt:  TAAINKKRSRGLSAVCYAMP-LNARTLQWVSTISSV--------------------------------GEYGIWSAFLALLVRLFFFIPGELEIPFISLL

Query:  LVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICVTAVSFLLVI
        LVIVAPYQV ++RG QEG+I+SL I+ +LAFQHFSRAG+ ++AFDQNS++ATVA+I VT VSFL +I
Subjt:  LVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICVTAVSFLLVI

AT1G29395.1 COLD REGULATED 314 INNER MEMBRANE 14.5e-4244.78Show/hide
Query:  VCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAA--INKKRSRGLSAVCYAMPLNARTLQWVSTISSV-
        +C+S S  VSL+    +       LSL+  S  + LS       S +C+NPL  +   +  AT +  + K+R RG S VCYA P++A +LQW+STIS + 
Subjt:  VCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVGSEGIATAA--INKKRSRGLSAVCYAMPLNARTLQWVSTISSV-

Query:  -------------------------------GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRA
                                       GEYG+W+AFLAL+ RLFF  PGELE+PFI+LLLVIVAPYQV N+RG QEG+II++ I+ +LAFQHFSRA
Subjt:  -------------------------------GEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRA

Query:  GSFRRAFDQNSIVATVAVICVTAVSFLLVI
        GS  +A+++ S++ATVA+I VT VS LL++
Subjt:  GSFRRAFDQNSIVATVAVICVTAVSFLLVI

AT3G50830.1 cold-regulated 413-plasma membrane 26.0e-1041.98Show/hide
Query:  GEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGSIISLLIAAYLAFQHFSRAGSFRRAFDQ
        G+ G W AF+A+++RLFF    P  LE+P   +LL++V+P +   ++RGT  G++ISL I  YL  +H   +G FR +F Q
Subjt:  GEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGSIISLLIAAYLAFQHFSRAGSFRRAFDQ

AT4G37220.1 Cold acclimation protein WCOR413 family1.3e-0938.3Show/hide
Query:  GEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGSIISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAVICV
        G++G W A +A++VRLFF    P  LEIP   +L+V+V+P  +   LR +  G++I L+IA YL  +H   +G F+ +F Q N I  T+ ++ +
Subjt:  GEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGSIISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAVICV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCGGCTCCGGTTTTTTCACGTTCATCAGTTGGGCGAGCGACAGTTTGCTTGTTGAATCAAAACTAGAAAATCGACAGCATCGTTTTCAAATTCCAGTCCAAAT
CCGAGAGAAGATAGAGGCTGAACCAGGCAAAGGAAGAAAGGGGGAAATGGTTTGTGTATCTTTATCTTCTGCTGTTTCACTTTACAGTCCCTCTCTCTACAAATCCAAGC
TCTCCGTTCCTCTCTCTCTAAGATCTTCATCGCCGAATGCAAAGCTCTCGTTCAGTCCTGCTGCTAAACGGAGTTCCATCTGTTACAATCCGCTCATGTTTACTGTCGGT
AGCGAGGGGATTGCGACGGCGGCGATTAACAAGAAGAGGAGCCGTGGTTTAAGTGCTGTTTGTTACGCTATGCCTCTTAACGCTCGCACTCTTCAGTGGGTCTCCACCAT
TTCTTCTGTAGGAGAATATGGCATTTGGAGCGCTTTTCTGGCACTTCTTGTTCGACTGTTCTTCTTCATCCCTGGTGAATTGGAGATACCATTCATATCATTACTTTTGG
TGATTGTTGCCCCATATCAAGTCCAAAATTTAAGAGGAACTCAAGAAGGGAGCATTATCTCCCTACTTATTGCAGCATATTTGGCCTTCCAGCATTTCTCTCGAGCAGGC
AGCTTTCGGAGAGCTTTTGACCAGAATTCAATTGTTGCAACAGTAGCAGTCATTTGTGTTACTGCTGTCTCATTCCTGCTCGTGATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCCGGCTCCGGTTTTTTCACGTTCATCAGTTGGGCGAGCGACAGTTTGCTTGTTGAATCAAAACTAGAAAATCGACAGCATCGTTTTCAAATTCCAGTCCAAAT
CCGAGAGAAGATAGAGGCTGAACCAGGCAAAGGAAGAAAGGGGGAAATGGTTTGTGTATCTTTATCTTCTGCTGTTTCACTTTACAGTCCCTCTCTCTACAAATCCAAGC
TCTCCGTTCCTCTCTCTCTAAGATCTTCATCGCCGAATGCAAAGCTCTCGTTCAGTCCTGCTGCTAAACGGAGTTCCATCTGTTACAATCCGCTCATGTTTACTGTCGGT
AGCGAGGGGATTGCGACGGCGGCGATTAACAAGAAGAGGAGCCGTGGTTTAAGTGCTGTTTGTTACGCTATGCCTCTTAACGCTCGCACTCTTCAGTGGGTCTCCACCAT
TTCTTCTGTAGGAGAATATGGCATTTGGAGCGCTTTTCTGGCACTTCTTGTTCGACTGTTCTTCTTCATCCCTGGTGAATTGGAGATACCATTCATATCATTACTTTTGG
TGATTGTTGCCCCATATCAAGTCCAAAATTTAAGAGGAACTCAAGAAGGGAGCATTATCTCCCTACTTATTGCAGCATATTTGGCCTTCCAGCATTTCTCTCGAGCAGGC
AGCTTTCGGAGAGCTTTTGACCAGAATTCAATTGTTGCAACAGTAGCAGTCATTTGTGTTACTGCTGTCTCATTCCTGCTCGTGATCTGA
Protein sequenceShow/hide protein sequence
MAAGSGFFTFISWASDSLLVESKLENRQHRFQIPVQIREKIEAEPGKGRKGEMVCVSLSSAVSLYSPSLYKSKLSVPLSLRSSSPNAKLSFSPAAKRSSICYNPLMFTVG
SEGIATAAINKKRSRGLSAVCYAMPLNARTLQWVSTISSVGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG
SFRRAFDQNSIVATVAVICVTAVSFLLVI