; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10021335 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021335
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description60S ribosomal protein L18a-like protein
Genome locationChr05:7793488..7797891
RNA-Seq ExpressionHG10021335
SyntenyHG10021335
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044804 - AT1G29970-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147407.1 60S ribosomal protein L18a-like protein [Cucumis sativus]3.9e-8193.08Show/hide
Query:  MSGDGKSSAVFGDPQSQYHYGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGKS+ VFGDP SQYHYGTFQGV NYY S PQPQPQPQPQSVVGFPQPVA   VSGH PCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
Subjt:  MSGDGKSSAVFGDPQSQYHYGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW
        FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGIT GVEPW
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW

XP_008444018.1 PREDICTED: 60S ribosomal protein L18a-like protein [Cucumis melo]2.1e-8294.34Show/hide
Query:  MSGDGKSSAVFGDPQSQYHYGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGKSS VFGDP SQYHYGTFQGV NYY S PQPQPQPQPQSVVGFPQPVAP  VSGH PCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
Subjt:  MSGDGKSSAVFGDPQSQYHYGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW
        FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGIT GVEPW
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW

XP_022140257.1 60S ribosomal protein L18a-like protein [Momordica charantia]5.8e-7788.05Show/hide
Query:  MSGDGKSSAVFGDPQSQYHYGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGK+SAV GDPQSQYHYGTFQGV NYY SA QPQPQPQP SVVGFPQPVAP  VSG HP YHGHLGYQAVPVQGYAI+EGRP+QEARLPCCGIGMGW
Subjt:  MSGDGKSSAVFGDPQSQYHYGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW
        FLF+IGFFLGGIPWYVGAFIVLFVRVDYREKPGYVAC IASVLA++AITFG+TKG E W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW

XP_022927552.1 60S ribosomal protein L18a-like protein [Cucurbita moschata]7.1e-7586.79Show/hide
Query:  MSGDGKSSAVFGDPQSQYHYGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGKSSAVFGDPQSQYHYGTFQGV NYY SAP+PQPQP PQSVVGFP  VAP      HPCYHGHL YQAVPVQGYAI+EGRPF EARLPCCGIGMGW
Subjt:  MSGDGKSSAVFGDPQSQYHYGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW
        FLFMIGFFLGGIPWYVGAF+VLFVRVDYREKPGY+ACAIASVLAV+AITFG++KGVE W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW

XP_038895475.1 60S ribosomal protein L18a-like protein [Benincasa hispida]8.1e-7991.82Show/hide
Query:  MSGDGKSSAVFGDPQSQYHYGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGKSSAVFGDPQSQYHYGTFQGV NYY SA    PQ QPQS VGFPQPV PSGVSGHHPCYHGHLGYQAVPVQGYAI+E RPF+EARLPCCGIGMGW
Subjt:  MSGDGKSSAVFGDPQSQYHYGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW
        FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGIT GVEPW
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW

TrEMBL top hitse value%identityAlignment
A0A0A0M051 Uncharacterized protein1.9e-8193.08Show/hide
Query:  MSGDGKSSAVFGDPQSQYHYGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGKS+ VFGDP SQYHYGTFQGV NYY S PQPQPQPQPQSVVGFPQPVA   VSGH PCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
Subjt:  MSGDGKSSAVFGDPQSQYHYGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW
        FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGIT GVEPW
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW

A0A1S3B9D9 60S ribosomal protein L18a-like protein1.0e-8294.34Show/hide
Query:  MSGDGKSSAVFGDPQSQYHYGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGKSS VFGDP SQYHYGTFQGV NYY S PQPQPQPQPQSVVGFPQPVAP  VSGH PCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
Subjt:  MSGDGKSSAVFGDPQSQYHYGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW
        FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGIT GVEPW
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW

A0A6J1CGC1 60S ribosomal protein L18a-like protein2.8e-7788.05Show/hide
Query:  MSGDGKSSAVFGDPQSQYHYGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGK+SAV GDPQSQYHYGTFQGV NYY SA QPQPQPQP SVVGFPQPVAP  VSG HP YHGHLGYQAVPVQGYAI+EGRP+QEARLPCCGIGMGW
Subjt:  MSGDGKSSAVFGDPQSQYHYGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW
        FLF+IGFFLGGIPWYVGAFIVLFVRVDYREKPGYVAC IASVLA++AITFG+TKG E W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW

A0A6J1EHH7 60S ribosomal protein L18a-like protein3.4e-7586.79Show/hide
Query:  MSGDGKSSAVFGDPQSQYHYGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGKSSAVFGDPQSQYHYGTFQGV NYY SAP+PQPQP PQSVVGFP  VAP      HPCYHGHL YQAVPVQGYAI+EGRPF EARLPCCGIGMGW
Subjt:  MSGDGKSSAVFGDPQSQYHYGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW
        FLFMIGFFLGGIPWYVGAF+VLFVRVDYREKPGY+ACAIASVLAV+AITFG++KGVE W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW

A0A6J1KIR0 60S ribosomal protein L18a-like protein1.7e-7486.79Show/hide
Query:  MSGDGKSSAVFGDPQSQYHYGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MS DGKSSAVFGDPQSQYHYGTFQGV NYY SAPQPQPQP PQSVVGFP  VAP      HPCYHGHL YQAVPVQGYAI+EGRPF EARLPCCGIGMGW
Subjt:  MSGDGKSSAVFGDPQSQYHYGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW
        FLFMIGFFLGGIPWYVGAF+VLFVRVDYREKPGY+ACAIASVLAV+AITFG++KGVE W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW

SwissProt top hitse value%identityAlignment
Q8L9S1 60S ribosomal protein L18a-like protein1.0e-3149.66Show/hide
Query:  QSQYHYGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPW
        Q QY+YGTFQGV N+    P PQ       +  FP   A   + GH    +   G+  V V  Y ++E RP  E  LPCCG+GMGWFLF++GF  GGIPW
Subjt:  QSQYHYGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPW

Query:  YVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW
        Y+GAFIVL   VD+REK GYVAC+IASV+ +IA+  G+T  +  W
Subjt:  YVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW

Arabidopsis top hitse value%identityAlignment
AT1G17080.1 Ribosomal protein L18ae family3.8e-4255.06Show/hide
Query:  DGKSSAVFGDPQSQYH-YGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFL
        + KS     +  +Q+H YGTFQGV+NY      P PQ     V GFPQP AP GV      Y+ H GYQ VPV G  + EGRP ++ RLPCCGIG+GWFL
Subjt:  DGKSSAVFGDPQSQYH-YGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFL

Query:  FMIGFFLGGIPWYVGAFIVLF-VRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW
        F++GFFLG IPWYVG FI++F  R+DYREKPGY+AC IA++LA IA+  G++KG + W
Subjt:  FMIGFFLGGIPWYVGAFIVLF-VRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW

AT1G29970.1 60S ribosomal protein L18A-17.1e-3349.66Show/hide
Query:  QSQYHYGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPW
        Q QY+YGTFQGV N+    P PQ       +  FP   A   + GH    +   G+  V V  Y ++E RP  E  LPCCG+GMGWFLF++GF  GGIPW
Subjt:  QSQYHYGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPW

Query:  YVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW
        Y+GAFIVL   VD+REK GYVAC+IASV+ +IA+  G+T  +  W
Subjt:  YVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW

AT1G29970.2 60S ribosomal protein L18A-12.4e-2851.59Show/hide
Query:  QSQYHYGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPW
        Q QY+YGTFQGV N+    P PQ       +  FP   A   + GH    +   G+  V V  Y ++E RP  E  LPCCG+GMGWFLF++GF  GGIPW
Subjt:  QSQYHYGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPW

Query:  YVGAFIVLFVRVDYREKPGYVACAIA
        Y+GAFIVL   VD+REK GYVAC+IA
Subjt:  YVGAFIVLFVRVDYREKPGYVACAIA

AT1G29970.3 60S ribosomal protein L18A-11.0e-2638.5Show/hide
Query:  QSQYHYGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFL------------
        Q QY+YGTFQGV N+    P PQ       +  FP   A   + GH    +   G+  V V  Y ++E RP  E  LPCCG+GMGWFL            
Subjt:  QSQYHYGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFL------------

Query:  ------------------------------FMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW
                                      F++GF  GGIPWY+GAFIVL   VD+REK GYVAC+IASV+ +IA+  G+T  +  W
Subjt:  ------------------------------FMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW

AT1G53560.1 Ribosomal protein L18ae family6.5e-3451.05Show/hide
Query:  YGTFQGVTNYYVSAPQPQPQPQPQS---VVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYV
        YGTFQGV  Y      P   P P S   V+G PQP  P G   H    H ++  +   V GY + +GRP ++ RLPCCG+G+GWFLF+IGF LG IPWYV
Subjt:  YGTFQGVTNYYVSAPQPQPQPQPQS---VVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYV

Query:  GAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW
        G FI++  R+D REKPGYVAC IA+V+A I I FG+  G   W
Subjt:  GAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGGCGACGGGAAAAGCAGCGCGGTATTCGGCGATCCACAGAGTCAATACCATTACGGTACGTTTCAGGGTGTCACAAACTATTATGTTTCTGCCCCACAACCGCA
GCCGCAGCCGCAGCCTCAATCTGTCGTTGGTTTCCCTCAGCCGGTTGCGCCGTCCGGAGTTTCTGGCCACCATCCATGTTACCATGGACATTTGGGTTACCAAGCCGTTC
CTGTTCAAGGTTATGCTATTCTTGAGGGAAGACCTTTTCAAGAAGCCCGTCTTCCTTGCTGTGGCATTGGCATGGGCTGGTTCTTGTTTATGATTGGTTTCTTTCTTGGT
GGCATTCCCTGGTATGTTGGAGCTTTTATCGTACTCTTTGTACGGGTGGATTACCGAGAAAAGCCTGGATATGTTGCATGTGCAATTGCTTCGGTTCTTGCCGTCATTGC
TATAACATTTGGTATCACCAAGGGAGTTGAGCCCTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGGCGACGGGAAAAGCAGCGCGGTATTCGGCGATCCACAGAGTCAATACCATTACGGTACGTTTCAGGGTGTCACAAACTATTATGTTTCTGCCCCACAACCGCA
GCCGCAGCCGCAGCCTCAATCTGTCGTTGGTTTCCCTCAGCCGGTTGCGCCGTCCGGAGTTTCTGGCCACCATCCATGTTACCATGGACATTTGGGTTACCAAGCCGTTC
CTGTTCAAGGTTATGCTATTCTTGAGGGAAGACCTTTTCAAGAAGCCCGTCTTCCTTGCTGTGGCATTGGCATGGGCTGGTTCTTGTTTATGATTGGTTTCTTTCTTGGT
GGCATTCCCTGGTATGTTGGAGCTTTTATCGTACTCTTTGTACGGGTGGATTACCGAGAAAAGCCTGGATATGTTGCATGTGCAATTGCTTCGGTTCTTGCCGTCATTGC
TATAACATTTGGTATCACCAAGGGAGTTGAGCCCTGGTGA
Protein sequenceShow/hide protein sequence
MSGDGKSSAVFGDPQSQYHYGTFQGVTNYYVSAPQPQPQPQPQSVVGFPQPVAPSGVSGHHPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLG
GIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITKGVEPW