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HG10021345 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021345
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr05:7935537..7935896
RNA-Seq ExpressionHG10021345
SyntenyHG10021345
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015388559.1 uncharacterized protein LOC107178191 [Citrus sinensis]3.4e-0540Show/hide
Query:  IKYLKAFSIHEGLVESDCLEVVNLLNNMTADLFEVSYLIKDTMLSARDFADISFTHTFWWHNFLAHSLAKKALDERMSSL
        +K  K FS+   ++E+DC EVV+LLNN       +S++I D     RDF ++ F H     N  AHSLAK AL    S++
Subjt:  IKYLKAFSIHEGLVESDCLEVVNLLNNMTADLFEVSYLIKDTMLSARDFADISFTHTFWWHNFLAHSLAKKALDERMSSL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTACGTACCTTGGTCATGTTGCCATGAAGTTTATTTCAAGATGCTCAGAGATTAAGTATCTTAAAGCATTCTCCATTCACGAGGGTCTTGTAGAATCTGATTGTTT
GGAGGTGGTTAATCTTCTGAATAACATGACCGCCGACCTTTTTGAGGTGTCATATTTGATTAAGGACACTATGCTTAGTGCTCGTGATTTTGCGGATATCTCATTCACTC
ACACCTTTTGGTGGCACAACTTTTTAGCACATTCTCTTGCGAAAAAGGCTTTGGATGAGCGGATGTCTTCTCTTCTCTATACTCCTTACTCTTGTCCTATTTGTTGTTTC
CTGATGTTGATACTTAGTTTGTTGTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTACGTACCTTGGTCATGTTGCCATGAAGTTTATTTCAAGATGCTCAGAGATTAAGTATCTTAAAGCATTCTCCATTCACGAGGGTCTTGTAGAATCTGATTGTTT
GGAGGTGGTTAATCTTCTGAATAACATGACCGCCGACCTTTTTGAGGTGTCATATTTGATTAAGGACACTATGCTTAGTGCTCGTGATTTTGCGGATATCTCATTCACTC
ACACCTTTTGGTGGCACAACTTTTTAGCACATTCTCTTGCGAAAAAGGCTTTGGATGAGCGGATGTCTTCTCTTCTCTATACTCCTTACTCTTGTCCTATTTGTTGTTTC
CTGATGTTGATACTTAGTTTGTTGTTGTGA
Protein sequenceShow/hide protein sequence
MITYLGHVAMKFISRCSEIKYLKAFSIHEGLVESDCLEVVNLLNNMTADLFEVSYLIKDTMLSARDFADISFTHTFWWHNFLAHSLAKKALDERMSSLLYTPYSCPICCF
LMLILSLLL