; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10021349 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021349
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationChr05:7969189..7969978
RNA-Seq ExpressionHG10021349
SyntenyHG10021349
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN65550.1 hypothetical protein Csa_019856 [Cucumis sativus]2.8e-10484.72Show/hide
Query:  PLP-PPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPPPPFPVATHSSSSAEESLSTPLYLHFPQTNTSSAIQESSEPPLEFISSSSQSPPSPPKSEPN
        PLP PP +SLHSNFFSSLKQVEKRLKLDH SQ+DVLHPPPP PV T+SSS+ E+SLSTP+YLHFPQTNTSS +QESS+ PLEF+SSSSQSPPS PKSE N
Subjt:  PLP-PPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPPPPFPVATHSSSSAEESLSTPLYLHFPQTNTSSAIQESSEPPLEFISSSSQSPPSPPKSEPN

Query:  PPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEPLRLAYLLLGKAV
        PP PIDR QN+ VDDIQRLIQLLGL DSCDEKE GAK+GC+GCEGCE GFYSKIVGLKGPKCR EVERLNGWI+FF NGG EE+RLEPLRLAYLLLGKAV
Subjt:  PPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEPLRLAYLLLGKAV

Query:  FASNGGDGCLEGLEFPSTVEDFLLNDPPA
        FASN  DGCLEGLEFPSTVEDFLLNDPPA
Subjt:  FASNGGDGCLEGLEFPSTVEDFLLNDPPA

XP_004147438.2 uncharacterized protein LOC101217056 [Cucumis sativus]2.8e-10484.72Show/hide
Query:  PLP-PPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPPPPFPVATHSSSSAEESLSTPLYLHFPQTNTSSAIQESSEPPLEFISSSSQSPPSPPKSEPN
        PLP PP +SLHSNFFSSLKQVEKRLKLDH SQ+DVLHPPPP PV T+SSS+ E+SLSTP+YLHFPQTNTSS +QESS+ PLEF+SSSSQSPPS PKSE N
Subjt:  PLP-PPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPPPPFPVATHSSSSAEESLSTPLYLHFPQTNTSSAIQESSEPPLEFISSSSQSPPSPPKSEPN

Query:  PPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEPLRLAYLLLGKAV
        PP PIDR QN+ VDDIQRLIQLLGL DSCDEKE GAK+GC+GCEGCE GFYSKIVGLKGPKCR EVERLNGWI+FF NGG EE+RLEPLRLAYLLLGKAV
Subjt:  PPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEPLRLAYLLLGKAV

Query:  FASNGGDGCLEGLEFPSTVEDFLLNDPPA
        FASN  DGCLEGLEFPSTVEDFLLNDPPA
Subjt:  FASNGGDGCLEGLEFPSTVEDFLLNDPPA

XP_008444181.1 PREDICTED: uncharacterized protein LOC103487596 [Cucumis melo]1.6e-10282.68Show/hide
Query:  PPPLPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPPPPFPVATHSSSSAEES-LSTPLYLHFPQTNTSSAIQESSEPPLEFISSSSQSPPSPPKSE
        PPP PPP +SLHS+FFSSLKQVEKRLKLDH SQ+DVLHPPPP PV T++SSS EE  LSTP+YLHFPQTNTSS +QESS+PPLEF+S+ S SPPS PKS 
Subjt:  PPPLPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPPPPFPVATHSSSSAEES-LSTPLYLHFPQTNTSSAIQESSEPPLEFISSSSQSPPSPPKSE

Query:  PNPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEPLRLAYLLLGK
         NPPN IDR QN+ +DDIQRLIQLLGL DSCDEKELG K GC+GCEGCE GFYSKIVGLKGPKCR EVERLNGWI+FF NGGGEE+RLEPLRLAYLLLGK
Subjt:  PNPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEPLRLAYLLLGK

Query:  AVFASNGGDGCLEGLEFPSTVEDFLLNDPPA
        AVFASNG DGCL+GLEFPSTVEDFLLNDPPA
Subjt:  AVFASNGGDGCLEGLEFPSTVEDFLLNDPPA

XP_023519908.1 uncharacterized protein LOC111783234 [Cucurbita pepo subsp. pepo]9.1e-9575.73Show/hide
Query:  PPSPPPPLPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPP-----PPFPVATHSSSSAEESLSTPLYLHFPQTNTSSAIQESSEPPLEFISSSSQS
        PP PPPP PPPS+SLHS+FFSSLKQVEKRLKLD+PSQ+D L PP     P  PV   SSSSAEES+STP+YLH PQTNT+S++QESSEPP EF+S+SS  
Subjt:  PPSPPPPLPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPP-----PPFPVATHSSSSAEESLSTPLYLHFPQTNTSSAIQESSEPPLEFISSSSQS

Query:  PPSPPKSEPNPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEPLR
             KSE N PN ID  Q++ VDDIQRL+QLLGLGDS +E+ELGA+SGC+GCEGCE GFYSKIVGLKGPKC  E ERLNGWI++ WNGGGE ERLEPLR
Subjt:  PPSPPKSEPNPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEPLR

Query:  LAYLLLGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA
        LAYLL+GKAVFASNGGD CLEGLEFPSTVEDFLLNDPPA
Subjt:  LAYLLLGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA

XP_038895328.1 uncharacterized protein LOC120083579 [Benincasa hispida]5.7e-10583.05Show/hide
Query:  MEPPSPPPPLPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPPPPFPVATHSSSSAEESLSTPLYLHFPQTNTSSAIQESSEPPLEFISSSSQSPPS
        M+PP P    PPPSVSLHSNFFSSLKQVEKRLKLDH SQ+DVLHPPP FPV T+SSSS E+SLSTP+YLHFPQTNT SA+QESSEPPLEF+S+SSQSPPS
Subjt:  MEPPSPPPPLPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPPPPFPVATHSSSSAEESLSTPLYLHFPQTNTSSAIQESSEPPLEFISSSSQSPPS

Query:  PPKSEPNPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEPLRLAY
         PKSE NP   IDR QN  V DIQRLIQLLGLG+SCDE ELGAK+GC+GCEGCE GFYSKIVGLKGPKC+ EVERLNGWI+FF NGGGEEERLEPLRLAY
Subjt:  PPKSEPNPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEPLRLAY

Query:  LLLGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA
        LL GK+VFASNG DGCLEG+EFPSTVEDFLLNDPPA
Subjt:  LLLGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA

TrEMBL top hitse value%identityAlignment
A0A0A0LUG6 Uncharacterized protein1.4e-10484.72Show/hide
Query:  PLP-PPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPPPPFPVATHSSSSAEESLSTPLYLHFPQTNTSSAIQESSEPPLEFISSSSQSPPSPPKSEPN
        PLP PP +SLHSNFFSSLKQVEKRLKLDH SQ+DVLHPPPP PV T+SSS+ E+SLSTP+YLHFPQTNTSS +QESS+ PLEF+SSSSQSPPS PKSE N
Subjt:  PLP-PPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPPPPFPVATHSSSSAEESLSTPLYLHFPQTNTSSAIQESSEPPLEFISSSSQSPPSPPKSEPN

Query:  PPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEPLRLAYLLLGKAV
        PP PIDR QN+ VDDIQRLIQLLGL DSCDEKE GAK+GC+GCEGCE GFYSKIVGLKGPKCR EVERLNGWI+FF NGG EE+RLEPLRLAYLLLGKAV
Subjt:  PPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEPLRLAYLLLGKAV

Query:  FASNGGDGCLEGLEFPSTVEDFLLNDPPA
        FASN  DGCLEGLEFPSTVEDFLLNDPPA
Subjt:  FASNGGDGCLEGLEFPSTVEDFLLNDPPA

A0A1S3B9V1 uncharacterized protein LOC1034875967.5e-10382.68Show/hide
Query:  PPPLPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPPPPFPVATHSSSSAEES-LSTPLYLHFPQTNTSSAIQESSEPPLEFISSSSQSPPSPPKSE
        PPP PPP +SLHS+FFSSLKQVEKRLKLDH SQ+DVLHPPPP PV T++SSS EE  LSTP+YLHFPQTNTSS +QESS+PPLEF+S+ S SPPS PKS 
Subjt:  PPPLPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPPPPFPVATHSSSSAEES-LSTPLYLHFPQTNTSSAIQESSEPPLEFISSSSQSPPSPPKSE

Query:  PNPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEPLRLAYLLLGK
         NPPN IDR QN+ +DDIQRLIQLLGL DSCDEKELG K GC+GCEGCE GFYSKIVGLKGPKCR EVERLNGWI+FF NGGGEE+RLEPLRLAYLLLGK
Subjt:  PNPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEPLRLAYLLLGK

Query:  AVFASNGGDGCLEGLEFPSTVEDFLLNDPPA
        AVFASNG DGCL+GLEFPSTVEDFLLNDPPA
Subjt:  AVFASNGGDGCLEGLEFPSTVEDFLLNDPPA

A0A5A7UHE6 Uncharacterized protein7.5e-10382.68Show/hide
Query:  PPPLPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPPPPFPVATHSSSSAEES-LSTPLYLHFPQTNTSSAIQESSEPPLEFISSSSQSPPSPPKSE
        PPP PPP +SLHS+FFSSLKQVEKRLKLDH SQ+DVLHPPPP PV T++SSS EE  LSTP+YLHFPQTNTSS +QESS+PPLEF+S+ S SPPS PKS 
Subjt:  PPPLPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPPPPFPVATHSSSSAEES-LSTPLYLHFPQTNTSSAIQESSEPPLEFISSSSQSPPSPPKSE

Query:  PNPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEPLRLAYLLLGK
         NPPN IDR QN+ +DDIQRLIQLLGL DSCDEKELG K GC+GCEGCE GFYSKIVGLKGPKCR EVERLNGWI+FF NGGGEE+RLEPLRLAYLLLGK
Subjt:  PNPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEPLRLAYLLLGK

Query:  AVFASNGGDGCLEGLEFPSTVEDFLLNDPPA
        AVFASNG DGCL+GLEFPSTVEDFLLNDPPA
Subjt:  AVFASNGGDGCLEGLEFPSTVEDFLLNDPPA

A0A6J1END4 uncharacterized protein LOC1114341551.6e-9275Show/hide
Query:  EPPSPPPPLPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPP-----PPFPVATHSSSSAEESLSTPLYLHFPQTNTSSAIQESSEPPLEFISSSSQ
        E   PPPP P PS+SLHS+FFSSLKQVEKRLKLD+PSQ+D L PP     P  PV   SSSS EESLSTP+YLH PQTNT+S++QESSEPP EF+S+SS 
Subjt:  EPPSPPPPLPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPP-----PPFPVATHSSSSAEESLSTPLYLHFPQTNTSSAIQESSEPPLEFISSSSQ

Query:  SPPSPPKSEPNPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEPL
              KSE N PN ID  QN+ VDDIQRL+QLLGLGDS +E+ELGA+SGC+GCEGCE GFYSKIVGLKGPKC  EVERLNGWI +FW GGGE ERLEPL
Subjt:  SPPSPPKSEPNPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEPL

Query:  RLAYLLLGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA
        RLAYLL+GKAVFASNG D CLEGLEFPSTVEDFLLNDPPA
Subjt:  RLAYLLLGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA

A0A6J1KGL6 uncharacterized protein LOC1114955901.1e-9375.42Show/hide
Query:  EPPSPPPPLPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPP-----PPFPVATHSSSSAEESLSTPLYLHFPQTNTSSAIQESSEPPLEFISSSSQ
        E   PPPP PPPS+SLHS+FFSSLKQVEKRLKLD+PSQ+D L PP     P  PV   SSSS EESLSTP+YLH  QTNT+S++QESSEPP EF+S+SS 
Subjt:  EPPSPPPPLPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPP-----PPFPVATHSSSSAEESLSTPLYLHFPQTNTSSAIQESSEPPLEFISSSSQ

Query:  SPPSPPKSEPNPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEPL
              KSE N PN ID  QN+ VDDIQRL+QLLG GDS +EKELGA+SGC+GCEGCE GFYSKIVGLKGPKC  EVERLNGWI++FW GGGE ERLEPL
Subjt:  SPPSPPKSEPNPPNPIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEPL

Query:  RLAYLLLGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA
        RLAYLL+GKAVFASNGGD CLEGLEFPSTVEDFLLNDPPA
Subjt:  RLAYLLLGKAVFASNGGDGCLEGLEFPSTVEDFLLNDPPA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCCACCGTCGCCACCGCCACCGCTACCGCCGCCGTCTGTATCTCTTCACTCCAATTTCTTTTCCTCTCTAAAGCAGGTCGAAAAGCGCCTAAAATTAGACCATCC
ATCGCAGCAGGACGTTCTTCATCCACCGCCGCCATTTCCAGTAGCAACCCATTCTTCTTCATCGGCCGAAGAGTCACTGAGCACTCCCCTGTACCTTCATTTCCCCCAAA
CCAACACAAGCTCCGCCATACAAGAAAGCAGCGAACCACCACTGGAATTCATCTCAAGTTCCTCCCAATCTCCACCATCCCCTCCAAAATCAGAACCGAATCCTCCGAAT
CCCATCGATCGTGACCAAAATCAGGCTGTAGACGACATTCAACGGCTAATTCAACTGCTAGGGTTAGGAGATTCGTGTGACGAAAAGGAATTAGGAGCTAAGAGTGGCTG
TGATGGCTGTGAGGGTTGTGAAGGCGGGTTTTACAGTAAGATCGTTGGCCTGAAAGGCCCCAAATGTAGAATGGAGGTGGAGAGGCTAAATGGATGGATTAAGTTCTTTT
GGAATGGTGGTGGTGAAGAAGAGAGATTAGAGCCTCTTAGATTGGCATATTTACTGTTAGGGAAAGCTGTTTTTGCTTCTAATGGGGGTGATGGGTGTTTGGAAGGATTG
GAATTCCCTTCAACTGTAGAGGATTTCTTGCTGAATGATCCTCCTGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCCACCGTCGCCACCGCCACCGCTACCGCCGCCGTCTGTATCTCTTCACTCCAATTTCTTTTCCTCTCTAAAGCAGGTCGAAAAGCGCCTAAAATTAGACCATCC
ATCGCAGCAGGACGTTCTTCATCCACCGCCGCCATTTCCAGTAGCAACCCATTCTTCTTCATCGGCCGAAGAGTCACTGAGCACTCCCCTGTACCTTCATTTCCCCCAAA
CCAACACAAGCTCCGCCATACAAGAAAGCAGCGAACCACCACTGGAATTCATCTCAAGTTCCTCCCAATCTCCACCATCCCCTCCAAAATCAGAACCGAATCCTCCGAAT
CCCATCGATCGTGACCAAAATCAGGCTGTAGACGACATTCAACGGCTAATTCAACTGCTAGGGTTAGGAGATTCGTGTGACGAAAAGGAATTAGGAGCTAAGAGTGGCTG
TGATGGCTGTGAGGGTTGTGAAGGCGGGTTTTACAGTAAGATCGTTGGCCTGAAAGGCCCCAAATGTAGAATGGAGGTGGAGAGGCTAAATGGATGGATTAAGTTCTTTT
GGAATGGTGGTGGTGAAGAAGAGAGATTAGAGCCTCTTAGATTGGCATATTTACTGTTAGGGAAAGCTGTTTTTGCTTCTAATGGGGGTGATGGGTGTTTGGAAGGATTG
GAATTCCCTTCAACTGTAGAGGATTTCTTGCTGAATGATCCTCCTGCATAA
Protein sequenceShow/hide protein sequence
MEPPSPPPPLPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQDVLHPPPPFPVATHSSSSAEESLSTPLYLHFPQTNTSSAIQESSEPPLEFISSSSQSPPSPPKSEPNPPN
PIDRDQNQAVDDIQRLIQLLGLGDSCDEKELGAKSGCDGCEGCEGGFYSKIVGLKGPKCRMEVERLNGWIKFFWNGGGEEERLEPLRLAYLLLGKAVFASNGGDGCLEGL
EFPSTVEDFLLNDPPA