; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10021350 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021350
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationChr05:7970736..7972329
RNA-Seq ExpressionHG10021350
SyntenyHG10021350
Gene Ontology termsGO:0009765 - photosynthesis, light harvesting (biological process)
GO:0009536 - plastid (cellular component)
GO:0034357 - photosynthetic membrane (cellular component)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD1839186.1 unnamed protein product [Ananas comosus var. bracteatus]6.3e-5551.13Show/hide
Query:  STMALSSPSLAGKAVKLTPS-SSELLGNGGRVSMRKSASK---SVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP----ETFAKN
        +TMALSSPSLAG AVKL PS +S++LG  GRV+MRK+  +   + +SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAG    P     T +  
Subjt:  STMALSSPSLAGKAVKLTPS-SSELLGNGGRVSMRKSASK---SVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP----ETFAKN

Query:  RELEVGYARGIGLRVPRASFPQRREVRRSSVVQGRFADLQRRWARLLREPKLDSRPKHSSHLGLLGCSHGSRRGIPYRGWPTWR----------------
             G      LRVP A+  QRREVRR  VVQGR ADLQR    L  +P+LD R +H   LG+ G  HG RRG+P    P                   
Subjt:  RELEVGYARGIGLRVPRASFPQRREVRRSSVVQGRFADLQRRWARLLREPKLDSRPKHSSHLGLLGCSHGSRRGIPYRGWPTWR----------------

Query:  -----------------------------------GKGPLENLADHLADPVNNNAWAYATNFVPGK
                                           GKGP+ENLADHLADPVNNNAWAYATNFVPGK
Subjt:  -----------------------------------GKGPLENLADHLADPVNNNAWAYATNFVPGK

KAG6416692.1 hypothetical protein SASPL_124128 [Salvia splendens]2.8e-5553.7Show/hide
Query:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
        MA STMALSSPS AG+AVK TP  S    NGGRVSMRK ASKSVSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
Subjt:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV

Query:  GYARGIGLRVPRASFPQRREVRRSSVVQGRFADLQRRWARLLREPKLDSRPKHSSHLGLLGCSHGSRRGIPYRGWPT-----------------------
         ++R   L      FP+                       LL    +     H  HLG  G  HG RRGIP  G  T                       
Subjt:  GYARGIGLRVPRASFPQRREVRRSSVVQGRFADLQRRWARLLREPKLDSRPKHSSHLGLLGCSHGSRRGIPYRGWPT-----------------------

Query:  ------------------------WRGKGPLENLADHLADPVNNNAWAYATNFVPGK
                                  GKGPLENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  ------------------------WRGKGPLENLADHLADPVNNNAWAYATNFVPGK

XP_021599266.1 chlorophyll a-b binding protein of LHCII type 1-like [Manihot esculenta]1.8e-5453.16Show/hide
Query:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
        MA STMALSSPSLAGKAVKLTPS+ EL+GN GR SMRK+ASK+VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
Subjt:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV

Query:  GYARGIGLRVPRASFPQRREVRRSSVVQGRFADLQRRWARLLREPKLD-----SRPKHSSHLGLLGCS---HGSRRGIPYRGWPTWR-------------
         + R   L      FP+   + R+ V  G  A   +  A++  E  LD     S     S L +  C     G+  G    G P                
Subjt:  GYARGIGLRVPRASFPQRREVRRSSVVQGRFADLQRRWARLLREPKLD-----SRPKHSSHLGLLGCS---HGSRRGIPYRGWPTWR-------------

Query:  --------------------------------------GKGPLENLADHLADPVNNNAWAYATNFVPGK
                                              GKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  --------------------------------------GKGPLENLADHLADPVNNNAWAYATNFVPGK

XP_022142169.1 chlorophyll a-b binding protein of LHCII type 1-like [Momordica charantia]1.1e-5453.53Show/hide
Query:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
        MA STMALSSPSLAGKAVKLTPSS ELLGN GRVSMRK  SKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
Subjt:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV

Query:  GYARGIGLRVPRASFPQRREVRRSSVVQGRFADLQRRWARLLREPKLD--SRPK--HSSHLGLLGCSH----GSRRGIPYRGWPTWR-------------
         ++R   L      FP+   + R+ V  G  A   +  +++  E  LD    P   H+  +  +  S     G+  G    G P                
Subjt:  GYARGIGLRVPRASFPQRREVRRSSVVQGRFADLQRRWARLLREPKLD--SRPK--HSSHLGLLGCSH----GSRRGIPYRGWPTWR-------------

Query:  --------------------------------------GKGPLENLADHLADPVNNNAWAYATNFVPGK
                                              GKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  --------------------------------------GKGPLENLADHLADPVNNNAWAYATNFVPGK

XP_038877609.1 chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida]1.0e-5754.28Show/hide
Query:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
        MA STMALSSPSLAGKAVKLTPSS ELLGNGGRVSMRKSASKS+SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
Subjt:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV

Query:  GYARGIGLRVPRASFPQRREVRRSSVVQGRFADLQRRWARLLREPKLD--SRPK--HSSHLGLLGCSH----GSRRGIPYRGWPTWR-------------
         ++R   L      FP+   + R+ V  G  A   +  +++  E  LD    P   H+  +  +  S     G+  G    G P                
Subjt:  GYARGIGLRVPRASFPQRREVRRSSVVQGRFADLQRRWARLLREPKLD--SRPK--HSSHLGLLGCSH----GSRRGIPYRGWPTWR-------------

Query:  --------------------------------------GKGPLENLADHLADPVNNNAWAYATNFVPGK
                                              GKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  --------------------------------------GKGPLENLADHLADPVNNNAWAYATNFVPGK

TrEMBL top hitse value%identityAlignment
A0A218WJN5 Chlorophyll a-b binding protein, chloroplastic1.5e-5453.16Show/hide
Query:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
        MA STMALSSPS AGKAVKL+PS+ ELLGN GRVSMRKS +KSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
Subjt:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV

Query:  GYARGIGLRVPRASFPQRREVRRSSVVQGRFADLQRRWARLLREPKLD-----SRPKHSSHLGLLGCS---HGSRRGIPYRGWPTWR-------------
         + R   L      FP+   + R+ V  G  A   +  A++  E  LD     S     S L +  C     G+  G    G P                
Subjt:  GYARGIGLRVPRASFPQRREVRRSSVVQGRFADLQRRWARLLREPKLD-----SRPKHSSHLGLLGCS---HGSRRGIPYRGWPTWR-------------

Query:  --------------------------------------GKGPLENLADHLADPVNNNAWAYATNFVPGK
                                              GKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  --------------------------------------GKGPLENLADHLADPVNNNAWAYATNFVPGK

A0A251IVJ3 Chlorophyll a-b binding protein, chloroplastic8.9e-5553.16Show/hide
Query:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
        MA STMALSSPSLAGKAVKLTPS+ EL+GN GR SMRK+ASK+VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
Subjt:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV

Query:  GYARGIGLRVPRASFPQRREVRRSSVVQGRFADLQRRWARLLREPKLD-----SRPKHSSHLGLLGCS---HGSRRGIPYRGWPTWR-------------
         + R   L      FP+   + R+ V  G  A   +  A++  E  LD     S     S L +  C     G+  G    G P                
Subjt:  GYARGIGLRVPRASFPQRREVRRSSVVQGRFADLQRRWARLLREPKLD-----SRPKHSSHLGLLGCS---HGSRRGIPYRGWPTWR-------------

Query:  --------------------------------------GKGPLENLADHLADPVNNNAWAYATNFVPGK
                                              GKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  --------------------------------------GKGPLENLADHLADPVNNNAWAYATNFVPGK

A0A6J1CKT5 Chlorophyll a-b binding protein, chloroplastic5.2e-5553.53Show/hide
Query:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
        MA STMALSSPSLAGKAVKLTPSS ELLGN GRVSMRK  SKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
Subjt:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV

Query:  GYARGIGLRVPRASFPQRREVRRSSVVQGRFADLQRRWARLLREPKLD--SRPK--HSSHLGLLGCSH----GSRRGIPYRGWPTWR-------------
         ++R   L      FP+   + R+ V  G  A   +  +++  E  LD    P   H+  +  +  S     G+  G    G P                
Subjt:  GYARGIGLRVPRASFPQRREVRRSSVVQGRFADLQRRWARLLREPKLD--SRPK--HSSHLGLLGCSH----GSRRGIPYRGWPTWR-------------

Query:  --------------------------------------GKGPLENLADHLADPVNNNAWAYATNFVPGK
                                              GKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  --------------------------------------GKGPLENLADHLADPVNNNAWAYATNFVPGK

A0A6V7Q8M3 Chlorophyll a-b binding protein, chloroplastic3.1e-5551.13Show/hide
Query:  STMALSSPSLAGKAVKLTPS-SSELLGNGGRVSMRKSASK---SVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP----ETFAKN
        +TMALSSPSLAG AVKL PS +S++LG  GRV+MRK+  +   + +SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAG    P     T +  
Subjt:  STMALSSPSLAGKAVKLTPS-SSELLGNGGRVSMRKSASK---SVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP----ETFAKN

Query:  RELEVGYARGIGLRVPRASFPQRREVRRSSVVQGRFADLQRRWARLLREPKLDSRPKHSSHLGLLGCSHGSRRGIPYRGWPTWR----------------
             G      LRVP A+  QRREVRR  VVQGR ADLQR    L  +P+LD R +H   LG+ G  HG RRG+P    P                   
Subjt:  RELEVGYARGIGLRVPRASFPQRREVRRSSVVQGRFADLQRRWARLLREPKLDSRPKHSSHLGLLGCSHGSRRGIPYRGWPTWR----------------

Query:  -----------------------------------GKGPLENLADHLADPVNNNAWAYATNFVPGK
                                           GKGP+ENLADHLADPVNNNAWAYATNFVPGK
Subjt:  -----------------------------------GKGPLENLADHLADPVNNNAWAYATNFVPGK

A0A7I8J5T0 Chlorophyll a-b binding protein, chloroplastic1.5e-5461.35Show/hide
Query:  STMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSAS--KSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVG
        +TMALSSPSLAG+AVKL  +SSE+LG  GR+SMRK+    K VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 
Subjt:  STMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSAS--KSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVG

Query:  YAR----GIGLRVPRASFPQRREVRRSSVVQGRFADLQRRWARLLREPKLDSRPKHSSHLGLLGCSHGSRRGIPYRGWPTWRGKGPLENLADHLADPVNN
        ++R    G      RA+ PQRR+VRR  VVQGR  DLQRR ARL  EP+  +RP+H  HLG  G  HG+  G    G       GPL  + D L     +
Subjt:  YAR----GIGLRVPRASFPQRREVRRSSVVQGRFADLQRRWARLLREPKLDSRPKHSSHLGLLGCSHGSRRGIPYRGWPTWRGKGPLENLADHLADPVNN

Query:  NAWAYAT
          W + T
Subjt:  NAWAYAT

SwissProt top hitse value%identityAlignment
P07369 Chlorophyll a-b binding protein 3C, chloroplastic8.8e-5249.82Show/hide
Query:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL
        MA STMALSS + AGKAVKL+PSSSE+ GN GRV+MRK+A+K+   SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Subjt:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL

Query:  EVGYARGIGLRVPRASFPQRREVRRSSVVQGRFADLQRRWARLLREPKLD-----SRPKHSSHLGLLGCS---HGSRRGIPYRGWPTWR-----------
        EV + R   L      FP+   + R+ V  G  A   +  +++  E  LD     S     S L +  C     G+  G    G P              
Subjt:  EVGYARGIGLRVPRASFPQRREVRRSSVVQGRFADLQRRWARLLREPKLD-----SRPKHSSHLGLLGCS---HGSRRGIPYRGWPTWR-----------

Query:  ----------------------------------------GKGPLENLADHLADPVNNNAWAYATNFVPGK
                                                GKGPLENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  ----------------------------------------GKGPLENLADHLADPVNNNAWAYATNFVPGK

P07370 Chlorophyll a-b binding protein 1B, chloroplastic8.8e-5248.7Show/hide
Query:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
        MA +TMALSSPS AG+AVKL+PS+SE+ GN GR++MRK+ +KS  S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
Subjt:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV

Query:  GYARGIGLRVPRASFPQRREVRRSSVVQGRFADLQRRWARLLREPKLD-----SRPKHSSHLGLLGCS---HGSRRGIPYRGWPTWR-------------
         + R   L      FP+   + R+ V  G  A   +  +++  E  LD     S     S L +  C     G+  G    G P                
Subjt:  GYARGIGLRVPRASFPQRREVRRSSVVQGRFADLQRRWARLLREPKLD-----SRPKHSSHLGLLGCS---HGSRRGIPYRGWPTWR-------------

Query:  --------------------------------------GKGPLENLADHLADPVNNNAWAYATNFVPGK
                                              GKGPLENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  --------------------------------------GKGPLENLADHLADPVNNNAWAYATNFVPGK

P12469 Chlorophyll a-b binding protein C, chloroplastic2.6e-5150.75Show/hide
Query:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL
        MA STMALSS S AGKAVKL+PSSSE+ GN G+V+MRK+ASK+  VSS SPWYGP+RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Subjt:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL

Query:  EVGYARGIGLRVPRASFPQ---RREVRRSSVV----------QG-----------RFADLQRRWA------------RLLREP-----------------
        EV + R   L      FP+   R  V+    V          QG               +   WA            R+  EP                 
Subjt:  EVGYARGIGLRVPRASFPQ---RREVRRSSVV----------QG-----------RFADLQRRWA------------RLLREP-----------------

Query:  KLDSRPKHSSHLGLLGCSHGSRRGIPYRGW---PTWRGKGPLENLADHLADPVNNNAWAYATNFVPGK
         L   P+  + L +    +G        G+       GKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  KLDSRPKHSSHLGLLGCSHGSRRGIPYRGW---PTWRGKGPLENLADHLADPVNNNAWAYATNFVPGK

P27493 Chlorophyll a-b binding protein 21, chloroplastic2.3e-5249.44Show/hide
Query:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
        MA +TMALSSPS AG+AVKL+PS+ E+ GN GRVSMRK+ +K V+S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
Subjt:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV

Query:  GYARGIGLRVPRASFPQRREVRRSSVVQGRFADLQRRWARLLREPKLD-----SRPKHSSHLGLLGCS---HGSRRGIPYRGWPTWR-------------
         + R   L      FP+   + R+ V  G  A   +  +++  E  LD     S     S L +  C     G+  G    G P                
Subjt:  GYARGIGLRVPRASFPQRREVRRSSVVQGRFADLQRRWARLLREPKLD-----SRPKHSSHLGLLGCS---HGSRRGIPYRGWPTWR-------------

Query:  --------------------------------------GKGPLENLADHLADPVNNNAWAYATNFVPGK
                                              GKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  --------------------------------------GKGPLENLADHLADPVNNNAWAYATNFVPGK

P27495 Chlorophyll a-b binding protein 40, chloroplastic5.5e-5451.29Show/hide
Query:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSAS--KSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL
        MA STMALSSPS AGKAVKL+PSSSE+ GN G+V+MRK+AS  K+VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Subjt:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSAS--KSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL

Query:  EVGYARGIGLRVPRASFPQRREVRRSSVVQGRFADLQRRWARLLREPKLD-----SRPKHSSHLGLLGCS---HGSRRGIPYRGWPTWR-----------
        EV + R   L      FP+   + R+ V  G  A   +  +++  E  LD     S     S L +  C     G+  G    G P              
Subjt:  EVGYARGIGLRVPRASFPQRREVRRSSVVQGRFADLQRRWARLLREPKLD-----SRPKHSSHLGLLGCS---HGSRRGIPYRGWPTWR-----------

Query:  ----------------------------------------GKGPLENLADHLADPVNNNAWAYATNFVPGK
                                                GKGPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  ----------------------------------------GKGPLENLADHLADPVNNNAWAYATNFVPGK

Arabidopsis top hitse value%identityAlignment
AT1G29910.1 chlorophyll A/B binding protein 31.6e-4847.39Show/hide
Query:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
        MA STMALSSP+ AGKAV L+P++SE+LG+ GRV+MRK+ +K    SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELE
Subjt:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE

Query:  VGYARGIGLRVPRASFPQ---RREVRRSSVVQGR-----FAD----------------LQRRWARL-----------------LREPK------------
        V ++R   L      FP+   R  V+    V  +     F+D                +   WA                   L E +            
Subjt:  VGYARGIGLRVPRASFPQ---RREVRRSSVVQGR-----FAD----------------LQRRWARL-----------------LREPK------------

Query:  -LDSRPKHSSHLGLLGCSHGSRRGIPYRGW---PTWRGKGPLENLADHLADPVNNNAWAYATNFVPGK
         L + P+  + L +    +G        G+       GKGP+ENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  -LDSRPKHSSHLGLLGCSHGSRRGIPYRGW---PTWRGKGPLENLADHLADPVNNNAWAYATNFVPGK

AT1G29920.1 chlorophyll A/B-binding protein 21.6e-4847.39Show/hide
Query:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
        MA STMALSSP+ AGKAV L+P++SE+LG+ GRV+MRK+ +K    SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELE
Subjt:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE

Query:  VGYARGIGLRVPRASFPQ---RREVRRSSVVQGR-----FAD----------------LQRRWARL-----------------LREPK------------
        V ++R   L      FP+   R  V+    V  +     F+D                +   WA                   L E +            
Subjt:  VGYARGIGLRVPRASFPQ---RREVRRSSVVQGR-----FAD----------------LQRRWARL-----------------LREPK------------

Query:  -LDSRPKHSSHLGLLGCSHGSRRGIPYRGW---PTWRGKGPLENLADHLADPVNNNAWAYATNFVPGK
         L + P+  + L +    +G        G+       GKGP+ENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  -LDSRPKHSSHLGLLGCSHGSRRGIPYRGW---PTWRGKGPLENLADHLADPVNNNAWAYATNFVPGK

AT1G29930.1 chlorophyll A/B binding protein 14.2e-4947.76Show/hide
Query:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
        MA STMALSSP+ AGKAVKL+P++SE+LG+ GRV+MRK+ +K    SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELE
Subjt:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE

Query:  VGYARGIGLRVPRASFPQ---RREVRRSSVVQGR-----FAD----------------LQRRWARL-----------------LREPK------------
        V ++R   L      FP+   R  V+    V  +     F+D                +   WA                   L E +            
Subjt:  VGYARGIGLRVPRASFPQ---RREVRRSSVVQGR-----FAD----------------LQRRWARL-----------------LREPK------------

Query:  -LDSRPKHSSHLGLLGCSHGSRRGIPYRGW---PTWRGKGPLENLADHLADPVNNNAWAYATNFVPGK
         L + P+  + L +    +G        G+       GKGP+ENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  -LDSRPKHSSHLGLLGCSHGSRRGIPYRGW---PTWRGKGPLENLADHLADPVNNNAWAYATNFVPGK

AT2G34420.1 photosystem II light harvesting complex gene B1B21.0e-4747.76Show/hide
Query:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
        MA STMALSSP+ AGKAVK  P++S++LG+ GRV+MRK+ +K    SGSPWYG DRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELE
Subjt:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE

Query:  VGYARGIGLRVPRASFPQ---RREVRRSSVVQGR-----FAD----------------LQRRWARL-----------------LREPK------------
        V ++R   L      FP+   R  V+    V  +     F+D                +   WA                   L E +            
Subjt:  VGYARGIGLRVPRASFPQ---RREVRRSSVVQGR-----FAD----------------LQRRWARL-----------------LREPK------------

Query:  -LDSRPKHSSHLGLLGCSHGSRRGIPYRGW---PTWRGKGPLENLADHLADPVNNNAWAYATNFVPGK
         L + P+  + L +    +G        G+       GKGPLENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  -LDSRPKHSSHLGLLGCSHGSRRGIPYRGW---PTWRGKGPLENLADHLADPVNNNAWAYATNFVPGK

AT2G34430.1 light-harvesting chlorophyll-protein complex II subunit B12.9e-5047.57Show/hide
Query:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
        MA STMALSSP+L GKAVKL+P++SE+ G  GR++MRK++  +  SGSPWYG DRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEV
Subjt:  MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV

Query:  GYARGIGLRVPRASFPQ---RREVRRSSVVQGR-----FAD----------------LQRRWARL-----------------LREPK-------------
         ++R   L      FP+   R  V+    V  +     F+D                +   WA                   L E +             
Subjt:  GYARGIGLRVPRASFPQ---RREVRRSSVVQGR-----FAD----------------LQRRWARL-----------------LREPK-------------

Query:  LDSRPKHSSHLGLLGCSHGSRRGIPYRGW---PTWRGKGPLENLADHLADPVNNNAWAYATNFVPGK
        L + P+  + L +    +G        G+       GKGPLENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  LDSRPKHSSHLGLLGCSHGSRRGIPYRGW---PTWRGKGPLENLADHLADPVNNNAWAYATNFVPGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTCTCAACAATGGCTCTCTCTTCTCCGTCGCTTGCCGGAAAGGCAGTGAAACTCACTCCCTCTTCATCGGAGCTTCTCGGCAATGGCGGCAGAGTCAGCATGAG
GAAATCTGCCTCCAAATCTGTTTCTTCTGGAAGCCCTTGGTATGGACCTGACCGTGTCAAGTACTTGGGACCATTCTCCGGCGAGCCTCCATCTTATCTCACCGGTGAGT
TTCCTGGTGACTACGGCTGGGATACTGCCGGACTTTCTGCAGATCCCGAGACCTTCGCCAAGAACCGTGAGCTCGAAGTGGGCTATGCTCGGGGCATTGGGTTGCGTGTT
CCCAGAGCTTCTTTCCCGCAACGGCGTGAAGTTCGGAGAAGCAGTGTGGTTCAAGGCCGGTTCGCAGATCTTCAGCGAAGGTGGGCTCGACTACTTAGGGAACCCAAGCT
TGATTCACGCCCAAAGCATTCTAGCCATTTGGGCCTCTTAGGTTGTTCTCATGGGAGCCGTCGAGGGATACCGTATCGCGGGTGGCCCACTTGGAGAGGAAAGGGCCCAC
TAGAGAATCTTGCCGACCATCTTGCTGACCCAGTTAATAACAATGCTTGGGCTTACGCTACCAACTTTGTTCCTGGAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTCTCAACAATGGCTCTCTCTTCTCCGTCGCTTGCCGGAAAGGCAGTGAAACTCACTCCCTCTTCATCGGAGCTTCTCGGCAATGGCGGCAGAGTCAGCATGAG
GAAATCTGCCTCCAAATCTGTTTCTTCTGGAAGCCCTTGGTATGGACCTGACCGTGTCAAGTACTTGGGACCATTCTCCGGCGAGCCTCCATCTTATCTCACCGGTGAGT
TTCCTGGTGACTACGGCTGGGATACTGCCGGACTTTCTGCAGATCCCGAGACCTTCGCCAAGAACCGTGAGCTCGAAGTGGGCTATGCTCGGGGCATTGGGTTGCGTGTT
CCCAGAGCTTCTTTCCCGCAACGGCGTGAAGTTCGGAGAAGCAGTGTGGTTCAAGGCCGGTTCGCAGATCTTCAGCGAAGGTGGGCTCGACTACTTAGGGAACCCAAGCT
TGATTCACGCCCAAAGCATTCTAGCCATTTGGGCCTCTTAGGTTGTTCTCATGGGAGCCGTCGAGGGATACCGTATCGCGGGTGGCCCACTTGGAGAGGAAAGGGCCCAC
TAGAGAATCTTGCCGACCATCTTGCTGACCCAGTTAATAACAATGCTTGGGCTTACGCTACCAACTTTGTTCCTGGAAAATGA
Protein sequenceShow/hide protein sequence
MAVSTMALSSPSLAGKAVKLTPSSSELLGNGGRVSMRKSASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVGYARGIGLRV
PRASFPQRREVRRSSVVQGRFADLQRRWARLLREPKLDSRPKHSSHLGLLGCSHGSRRGIPYRGWPTWRGKGPLENLADHLADPVNNNAWAYATNFVPGK