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HG10021384 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021384
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr05:8400138..8400440
RNA-Seq ExpressionHG10021384
SyntenyHG10021384
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054012.1 hypothetical protein E6C27_scaffold318G00660 [Cucumis melo var. makuwa]1.3e-1870.24Show/hide
Query:  NNDNNSLTPSGQPSPPLTPFSAIAPPRFCRASRPQIQITLQTIYEDETEDKICRRHCYHRKQASSSSFSSALSCFRPLRSLKCS
        NN+N +LTPS QPS PLT FSAI PPRF  ASRPQIQITL TIYE+ETE K C        QASSSS SSALS FRPL S+KCS
Subjt:  NNDNNSLTPSGQPSPPLTPFSAIAPPRFCRASRPQIQITLQTIYEDETEDKICRRHCYHRKQASSSSFSSALSCFRPLRSLKCS

KAE8653296.1 hypothetical protein Csa_023338 [Cucumis sativus]4.5e-2775Show/hide
Query:  MSLRLIYPIAQEMANKNNDNNSLTPSGQPSPPLTPFSAIAPPRFCRASRPQIQITLQTIYEDETEDKICRRHCYHRKQASSSSFSSALSCFRPLRSLKCS
        MSLRLIYPIAQEMA  NN+  +LTPS QPS PLT FSAIAPPRF  ASRP IQITL TIYE+ETE KIC        QA SSSFSSALSCFRPLRS+KCS
Subjt:  MSLRLIYPIAQEMANKNNDNNSLTPSGQPSPPLTPFSAIAPPRFCRASRPQIQITLQTIYEDETEDKICRRHCYHRKQASSSSFSSALSCFRPLRSLKCS

KAF5944818.1 hypothetical protein HYC85_018895 [Camellia sinensis]4.1e-0459.09Show/hide
Query:  TPSGQPSPPLTPFSAIAPPRFCRASRPQIQITLQTIYEDETEDK
        TP+   SP  TPFSA+APPRF   SR QI++TL+TI+E+ET D+
Subjt:  TPSGQPSPPLTPFSAIAPPRFCRASRPQIQITLQTIYEDETEDK

KAG6583881.1 hypothetical protein SDJN03_19813, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2464.22Show/hide
Query:  MSLRLIYPIAQEMANKNNDNNSLTP----SGQPSPPLTPFSAIAPPRFCRASRPQIQITLQTIYEDETEDKIC-----RRHCYHRKQASSSSFSSALSCF
        MS RL+YPI+QEM N NN    + P    SGQ SPPLT FSAIAPPR    SR QIQ+TLQTIYEDE+ED++C     RRHCY RK + S   S+ALSCF
Subjt:  MSLRLIYPIAQEMANKNNDNNSLTP----SGQPSPPLTPFSAIAPPRFCRASRPQIQITLQTIYEDETEDKIC-----RRHCYHRKQASSSSFSSALSCF

Query:  RPLRSLKCS
        RPLRSLKCS
Subjt:  RPLRSLKCS

TrEMBL top hitse value%identityAlignment
A0A0A0M102 Uncharacterized protein6.8e-2172.62Show/hide
Query:  NNDNNSLTPSGQPSPPLTPFSAIAPPRFCRASRPQIQITLQTIYEDETEDKICRRHCYHRKQASSSSFSSALSCFRPLRSLKCS
        NN+  +LTPS QPS PLT FSAIAPPRF  ASRP IQITL TIYE+ETE KIC        QA SSSFSSALSCFRPLRS+KCS
Subjt:  NNDNNSLTPSGQPSPPLTPFSAIAPPRFCRASRPQIQITLQTIYEDETEDKICRRHCYHRKQASSSSFSSALSCFRPLRSLKCS

A0A5D3DAX8 Uncharacterized protein6.4e-1970.24Show/hide
Query:  NNDNNSLTPSGQPSPPLTPFSAIAPPRFCRASRPQIQITLQTIYEDETEDKICRRHCYHRKQASSSSFSSALSCFRPLRSLKCS
        NN+N +LTPS QPS PLT FSAI PPRF  ASRPQIQITL TIYE+ETE K C        QASSSS SSALS FRPL S+KCS
Subjt:  NNDNNSLTPSGQPSPPLTPFSAIAPPRFCRASRPQIQITLQTIYEDETEDKICRRHCYHRKQASSSSFSSALSCFRPLRSLKCS

A0A7J7GZG5 Uncharacterized protein2.0e-0459.09Show/hide
Query:  TPSGQPSPPLTPFSAIAPPRFCRASRPQIQITLQTIYEDETEDK
        TP+   SP  TPFSA+APPRF   SR QI++TL+TI+E+ET D+
Subjt:  TPSGQPSPPLTPFSAIAPPRFCRASRPQIQITLQTIYEDETEDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTAAGGCTTATATATCCCATCGCACAAGAAATGGCCAATAAAAATAATGACAACAACAGCCTAACTCCTTCCGGCCAACCATCGCCGCCGCTAACCCCATTTTC
AGCGATTGCGCCGCCGCGCTTCTGCCGTGCTTCTAGACCCCAAATTCAAATTACTCTGCAAACCATTTATGAAGACGAAACCGAAGACAAAATCTGCCGTCGCCATTGTT
ACCATCGTAAACAAGCTTCTTCTTCCTCTTTCTCCTCGGCTCTCTCTTGTTTTCGTCCTCTTCGATCACTTAAATGTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTAAGGCTTATATATCCCATCGCACAAGAAATGGCCAATAAAAATAATGACAACAACAGCCTAACTCCTTCCGGCCAACCATCGCCGCCGCTAACCCCATTTTC
AGCGATTGCGCCGCCGCGCTTCTGCCGTGCTTCTAGACCCCAAATTCAAATTACTCTGCAAACCATTTATGAAGACGAAACCGAAGACAAAATCTGCCGTCGCCATTGTT
ACCATCGTAAACAAGCTTCTTCTTCCTCTTTCTCCTCGGCTCTCTCTTGTTTTCGTCCTCTTCGATCACTTAAATGTTCTTGA
Protein sequenceShow/hide protein sequence
MSLRLIYPIAQEMANKNNDNNSLTPSGQPSPPLTPFSAIAPPRFCRASRPQIQITLQTIYEDETEDKICRRHCYHRKQASSSSFSSALSCFRPLRSLKCS