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HG10021408 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021408
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B
Genome locationChr05:8757248..8758080
RNA-Seq ExpressionHG10021408
SyntenyHG10021408
Gene Ontology termsGO:0006120 - mitochondrial electron transport, NADH to ubiquinone (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR016680 - NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 8


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054071.1 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8-B-like [Cucumis melo var. makuwa]8.1e-2596.83Show/hide
Query:  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL
        MASAVDAAGDPIPTSAVLMSSSKHIA KCRSENVAYLQCK+KDPNPEKCLDKGHQVTRCVLSL
Subjt:  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL

XP_004135555.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Cucumis sativus]8.1e-2596.83Show/hide
Query:  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL
        MASAVDAAGDPIPTSAVLMSSSKHIA KCRSENVAYLQCK+KDPNPEKCLDKGHQVTRCVLSL
Subjt:  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL

XP_022958837.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Cucurbita moschata]1.1e-2496.83Show/hide
Query:  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL
        MASAVDAAGDPIPTSAVLMSSSKHIAN CRSENVAYLQCKRKDPNPEKCLDKG QVTRCVLSL
Subjt:  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL

XP_038893587.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Benincasa hispida]8.1e-2595.24Show/hide
Query:  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL
        MASAV+AAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCK+KDPNPEKCL+KGHQVTRCVLSL
Subjt:  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL

XP_038906805.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Benincasa hispida]8.1e-2595.24Show/hide
Query:  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL
        MASAVDAAGDPIPTSAVLMSSSKHIAN+CR ENVAYLQCK+KDPNPEKCLDKGHQVTRCVLSL
Subjt:  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL

TrEMBL top hitse value%identityAlignment
A0A0A0LY30 CHCH domain-containing protein3.9e-2596.83Show/hide
Query:  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL
        MASAVDAAGDPIPTSAVLMSSSKHIA KCRSENVAYLQCK+KDPNPEKCLDKGHQVTRCVLSL
Subjt:  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL

A0A1S3BBD5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B3.9e-2596.83Show/hide
Query:  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL
        MASAVDAAGDPIPTSAVLMSSSKHIA KCRSENVAYLQCK+KDPNPEKCLDKGHQVTRCVLSL
Subjt:  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL

A0A5A7UKJ4 NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 8-B-like3.9e-2596.83Show/hide
Query:  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL
        MASAVDAAGDPIPTSAVLMSSSKHIA KCRSENVAYLQCK+KDPNPEKCLDKGHQVTRCVLSL
Subjt:  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL

A0A6J1H2X4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like5.1e-2596.83Show/hide
Query:  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL
        MASAVDAAGDPIPTSAVLMSSSKHIAN CRSENVAYLQCKRKDPNPEKCLDKG QVTRCVLSL
Subjt:  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL

A0A6J1KXR2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like5.1e-2596.83Show/hide
Query:  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL
        MASAVDAAGDPIPTSAVLMSSSKHIAN CRSENVAYLQCKRKDPNPEKCLDKG QVTRCVLSL
Subjt:  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL

SwissProt top hitse value%identityAlignment
Q8LGE7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B1.4e-1971.43Show/hide
Query:  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL
        M+SAVDA G+PIPTSAVL +S+KHI  +C  ENVA+L+CK+ DPNPEKCLDKG  VTRCVL L
Subjt:  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL

Q9SQT4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-A2.9e-1765.57Show/hide
Query:  SAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL
        +AVD  G+PIPTSAVL +S+KHI  +C  EN+A+L+CK+ DPNPEKCL+KG  VTRCVL L
Subjt:  SAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL

Arabidopsis top hitse value%identityAlignment
AT3G06310.1 Cox19-like CHCH family protein2.1e-1865.57Show/hide
Query:  SAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL
        +AVD  G+PIPTSAVL +S+KHI  +C  EN+A+L+CK+ DPNPEKCL+KG  VTRCVL L
Subjt:  SAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL

AT3G06310.2 Cox19-like CHCH family protein7.1e-1964.52Show/hide
Query:  SAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSLF
        +AVD  G+PIPTSAVL +S+KHI  +C  EN+A+L+CK+ DPNPEKCL+KG  VTRCVL L+
Subjt:  SAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSLF

AT3G06310.3 Cox19-like CHCH family protein2.1e-1865.57Show/hide
Query:  SAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL
        +AVD  G+PIPTSAVL +S+KHI  +C  EN+A+L+CK+ DPNPEKCL+KG  VTRCVL L
Subjt:  SAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL

AT5G18800.1 Cox19-like CHCH family protein9.9e-2171.43Show/hide
Query:  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL
        M+SAVDA G+PIPTSAVL +S+KHI  +C  ENVA+L+CK+ DPNPEKCLDKG  VTRCVL L
Subjt:  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL

AT5G18800.2 Cox19-like CHCH family protein9.9e-2171.43Show/hide
Query:  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL
        M+SAVDA G+PIPTSAVL +S+KHI  +C  ENVA+L+CK+ DPNPEKCLDKG  VTRCVL L
Subjt:  MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGCGCAGTAGACGCTGCAGGAGATCCAATTCCTACATCGGCGGTGCTAATGTCCTCGTCAAAGCACATTGCGAACAAGTGTCGATCGGAGAATGTCGCATATCT
CCAGTGCAAACGGAAGGATCCGAACCCGGAGAAATGCCTGGACAAAGGCCATCAAGTCACTCGATGCGTCCTCTCCCTGTTCACGGTGGAAATAACGGACTGTGGAGGTC
TTCCACATTCAGAAGACACGGTGGAGTTAATGGATTTGGCAGTGGAGTTGGGCTGTAAAGTGGATCATCTTCCCATAAATTACCTTGGTTTTTCCCTTGATGGTAATCAT
CACTCCCTTGCCTCTTGGGAACCGTTAGTTGACAAGTTCAAAGCAAAGATTGCCGAGTGGAAAAGCTCCTTGCTTTCAAGGGGGACGCCTAACCTTGTTACATTTTGTGC
TTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGCGCAGTAGACGCTGCAGGAGATCCAATTCCTACATCGGCGGTGCTAATGTCCTCGTCAAAGCACATTGCGAACAAGTGTCGATCGGAGAATGTCGCATATCT
CCAGTGCAAACGGAAGGATCCGAACCCGGAGAAATGCCTGGACAAAGGCCATCAAGTCACTCGATGCGTCCTCTCCCTGTTCACGGTGGAAATAACGGACTGTGGAGGTC
TTCCACATTCAGAAGACACGGTGGAGTTAATGGATTTGGCAGTGGAGTTGGGCTGTAAAGTGGATCATCTTCCCATAAATTACCTTGGTTTTTCCCTTGATGGTAATCAT
CACTCCCTTGCCTCTTGGGAACCGTTAGTTGACAAGTTCAAAGCAAAGATTGCCGAGTGGAAAAGCTCCTTGCTTTCAAGGGGGACGCCTAACCTTGTTACATTTTGTGC
TTAA
Protein sequenceShow/hide protein sequence
MASAVDAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKRKDPNPEKCLDKGHQVTRCVLSLFTVEITDCGGLPHSEDTVELMDLAVELGCKVDHLPINYLGFSLDGNH
HSLASWEPLVDKFKAKIAEWKSSLLSRGTPNLVTFCA