; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10021427 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021427
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr05:9021059..9023414
RNA-Seq ExpressionHG10021427
SyntenyHG10021427
Gene Ontology termsGO:0016740 - transferase activity (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_024036939.1 uncharacterized protein LOC112096938 [Citrus clementina]8.6e-2552.21Show/hide
Query:  LPKGKSWRFTGVYGYPETHRKHLTWELLCRLSLTDSSPWLVGGDFNEILLDKEKLGGPVRGGSLLNNLREALDDCQLVDIGYYGPNFTWNGRKVGV-LLW
        +P G   R TGVYG+P+T +K  TW LL RL++  SSPWL  GDFNEIL   EK GG  R  +L+N+ RE L DC L D+GY G  FTWN  + G   + 
Subjt:  LPKGKSWRFTGVYGYPETHRKHLTWELLCRLSLTDSSPWLVGGDFNEILLDKEKLGGPVRGGSLLNNLREALDDCQLVDIGYYGPNFTWNGRKVGV-LLW

Query:  ERLDRFVCSNSFN
        ERLDRFVC+ +++
Subjt:  ERLDRFVCSNSFN

XP_030483252.1 uncharacterized protein LOC115699849 [Cannabis sativa]8.6e-2548.8Show/hide
Query:  LPKGKSWRFTGVYGYPETHRKHLTWELLCRLSLTDSSPWLVGGDFNEILLDKEKLGGPVRGGSLLNNLREALDDCQLVDIGYYGPNFTW-NGRKVGVLLW
        + +G+ WRFT  YG P+  ++  +W+LL R+    S PW VGGDFNEIL  KEK+GGP + G L+ N R+ALD C+L +I + G ++TW NGRK   L++
Subjt:  LPKGKSWRFTGVYGYPETHRKHLTWELLCRLSLTDSSPWLVGGDFNEILLDKEKLGGPVRGGSLLNNLREALDDCQLVDIGYYGPNFTW-NGRKVGVLLW

Query:  ERLDRFVCSNS--FNLFDKVAISHL
        ERLDR VC NS  F++F    + HL
Subjt:  ERLDRFVCSNS--FNLFDKVAISHL

XP_030923374.1 uncharacterized protein LOC115950293 [Quercus lobata]4.6e-2651.38Show/hide
Query:  KGKSWRFTGVYGYPETHRKHLTWELLCRLSLTDSSPWLVGGDFNEILLDKEKLGGPVRGGSLLNNLREALDDCQLVDIGYYGPNFTWNGRKVGVLLWERL
        K ++WRFTG+YG+PE  RK  TWELL  LS   + PW+  GDFNEIL   EK+GG  R  S +N+ R+ +D+C LVD+G+ G  FTW GR+ G ++ ERL
Subjt:  KGKSWRFTGVYGYPETHRKHLTWELLCRLSLTDSSPWLVGGDFNEILLDKEKLGGPVRGGSLLNNLREALDDCQLVDIGYYGPNFTWNGRKVGVLLWERL

Query:  DRFVCSNSF
        DR   S+S+
Subjt:  DRFVCSNSF

XP_030925041.1 uncharacterized protein LOC115952099 [Quercus lobata]8.6e-2546.79Show/hide
Query:  KGKSWRFTGVYGYPETHRKHLTWELLCRLSLTDSSPWLVGGDFNEILLDKEKLGGPVRGGSLLNNLREALDDCQLVDIGYYGPNFTWNGRKVGVLLWERL
        K  SWRFTG+YG+PE  RK  TW LL  L    + PWL  GDFNEIL+  EKLGG +R  ++++  RE +DDC  +D+G+ G  +TW G++   ++ ERL
Subjt:  KGKSWRFTGVYGYPETHRKHLTWELLCRLSLTDSSPWLVGGDFNEILLDKEKLGGPVRGGSLLNNLREALDDCQLVDIGYYGPNFTWNGRKVGVLLWERL

Query:  DRFVCSNSF
        DR + ++S+
Subjt:  DRFVCSNSF

XP_030939479.1 uncharacterized protein LOC115964277 [Quercus lobata]3.9e-2547.37Show/hide
Query:  LLPKGK--SWRFTGVYGYPETHRKHLTWELLCRLSLTDSSPWLVGGDFNEILLDKEKLGGPVRGGSLLNNLREALDDCQLVDIGYYGPNFTWNGRKVGVL
        ++ KGK  SWRFTG+YG+ E  RK  TW LL  L    + PWL  GDFNEIL+  EKLGG +R  + ++  RE +DDC  +D+GY G  +TW G++V  +
Subjt:  LLPKGK--SWRFTGVYGYPETHRKHLTWELLCRLSLTDSSPWLVGGDFNEILLDKEKLGGPVRGGSLLNNLREALDDCQLVDIGYYGPNFTWNGRKVGVL

Query:  LWERLDRFVCSNSF
        + ERLDR + ++S+
Subjt:  LWERLDRFVCSNSF

TrEMBL top hitse value%identityAlignment
A0A2N9G5I8 Reverse transcriptase domain-containing protein2.2e-2648.36Show/hide
Query:  KGKSWRFTGVYGYPETHRKHLTWELLCRLSLTDSSPWLVGGDFNEILLDKEKLGGPVRGGSLLNNLREALDDCQLVDIGYYGPNFTWNGRKVGV-LLWER
        K  +WRFTG YG PETHR+HL+W LL       S PWL  GDFNE+L   EK GGPVR    + + R+A+D+C  +D+GY GP FTW   +V    +WER
Subjt:  KGKSWRFTGVYGYPETHRKHLTWELLCRLSLTDSSPWLVGGDFNEILLDKEKLGGPVRGGSLLNNLREALDDCQLVDIGYYGPNFTWNGRKVGV-LLWER

Query:  LDRFVCSNS-FNLFDKVAISHL
        LDR + +   FN+F +  + HL
Subjt:  LDRFVCSNS-FNLFDKVAISHL

A0A2N9H1U1 Reverse transcriptase domain-containing protein4.9e-2651.26Show/hide
Query:  SWRFTGVYGYPETHRKHLTWELLCRLSLTDSSPWLVGGDFNEILLDKEKLGGPVRGGSLLNNLREALDDCQLVDIGYYGPNFTW-NGRKVGVLLWERLDR
        +WRFTG YG PETHR+HL+W LL  L    S PWL  GDFNE+L   EK GGPVR    + + R+A+D C  +D+GY GP FTW N R     +WERLDR
Subjt:  SWRFTGVYGYPETHRKHLTWELLCRLSLTDSSPWLVGGDFNEILLDKEKLGGPVRGGSLLNNLREALDDCQLVDIGYYGPNFTW-NGRKVGVLLWERLDR

Query:  FVCSNS-FNLFDKVAISHL
         + +   FN F +  I HL
Subjt:  FVCSNS-FNLFDKVAISHL

A0A2N9HW04 Reverse transcriptase domain-containing protein4.9e-2651.26Show/hide
Query:  SWRFTGVYGYPETHRKHLTWELLCRLSLTDSSPWLVGGDFNEILLDKEKLGGPVRGGSLLNNLREALDDCQLVDIGYYGPNFTW-NGRKVGVLLWERLDR
        +WRFTG YG PETHR+HL+W LL  L    S PWL  GDFNE+L   EK GGPVR    + + R+A+D C  +D+GY GP FTW N R     +WERLDR
Subjt:  SWRFTGVYGYPETHRKHLTWELLCRLSLTDSSPWLVGGDFNEILLDKEKLGGPVRGGSLLNNLREALDDCQLVDIGYYGPNFTW-NGRKVGVLLWERLDR

Query:  FVCSNS-FNLFDKVAISHL
         + +   FN F +  I HL
Subjt:  FVCSNS-FNLFDKVAISHL

A0A803PRV5 Uncharacterized protein3.4e-2752Show/hide
Query:  LPKGKSWRFTGVYGYPETHRKHLTWELLCRLSLTDSSPWLVGGDFNEILLDKEKLGGPVRGGSLLNNLREALDDCQLVDIGYYGPNFTW-NGRKVGVLLW
        +  G+ WRFTG YG P+  ++  +W+LL RL+   + PW+VGGDFNEIL  KEKLGG  +   L+NN R+ALD CQL D+GY G ++TW NGRK   L++
Subjt:  LPKGKSWRFTGVYGYPETHRKHLTWELLCRLSLTDSSPWLVGGDFNEILLDKEKLGGPVRGGSLLNNLREALDDCQLVDIGYYGPNFTW-NGRKVGVLLW

Query:  ERLDRFVCSNS--FNLFDKVAISHL
        ERLDR VC NS  F++F  + + HL
Subjt:  ERLDRFVCSNS--FNLFDKVAISHL

A0A803QMV0 Uncharacterized protein8.4e-2649.6Show/hide
Query:  LPKGKSWRFTGVYGYPETHRKHLTWELLCRLSLTDSSPWLVGGDFNEILLDKEKLGGPVRGGSLLNNLREALDDCQLVDIGYYGPNFTW-NGRKVGVLLW
        +  G+ WRFTG YG P+  ++  +W+LL R+S   S PW VGGDFNEI+   EK+GG  +   L+NN R+ALD CQL D+GY G ++TW NGRK   L++
Subjt:  LPKGKSWRFTGVYGYPETHRKHLTWELLCRLSLTDSSPWLVGGDFNEILLDKEKLGGPVRGGSLLNNLREALDDCQLVDIGYYGPNFTW-NGRKVGVLLW

Query:  ERLDRFVCSNS--FNLFDKVAISHL
        ERLDR VC N   F++F  + + HL
Subjt:  ERLDRFVCSNS--FNLFDKVAISHL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G40390.1 DNAse I-like superfamily protein1.9e-0633.68Show/hide
Query:  ETHRKHLTWELLCRLSLTD---SSPWLVGGDFNEILLDKEKLGGPVRGGSL--LNNLREALDDCQLVDIGYYGPNFTWNGRKVGVLLWERLDRFV
        E  R+ L W+ + RLS +    +SPWLV GDFN+I    E         SL  L +L+  + D  LVD+   G  +TW+  +    +  +LDR +
Subjt:  ETHRKHLTWELLCRLSLTD---SSPWLVGGDFNEILLDKEKLGGPVRGGSL--LNNLREALDDCQLVDIGYYGPNFTWNGRKVGVLLWERLDRFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTCGTCGGAGGTGGTGACTGGAGTAGGCCCGTGACGGTCGTCGGAGGTGGCGGTCAGAGGGCGCTATTACCGAAGGGAAAAAGTTGGCGTTTTACTGGGGTATA
TGGATACCCTGAAACTCATAGAAAGCACCTTACCTGGGAGTTATTGTGCAGACTTTCTTTGACTGATAGTTCCCCGTGGCTAGTGGGTGGGGATTTTAATGAAATTTTGT
TGGATAAGGAGAAGCTAGGAGGTCCTGTTAGAGGTGGGAGTCTGCTAAATAATTTGAGGGAGGCATTGGATGATTGTCAGCTGGTTGACATTGGTTACTATGGTCCTAAT
TTTACTTGGAATGGAAGAAAAGTAGGTGTGCTTCTTTGGGAAAGATTGGATAGATTTGTGTGTTCAAATTCCTTTAATTTATTTGACAAGGTGGCTATAAGTCATCTTGG
TTGGCTTTTTCTGATCATCGTCCAATTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTCGTCGGAGGTGGTGACTGGAGTAGGCCCGTGACGGTCGTCGGAGGTGGCGGTCAGAGGGCGCTATTACCGAAGGGAAAAAGTTGGCGTTTTACTGGGGTATA
TGGATACCCTGAAACTCATAGAAAGCACCTTACCTGGGAGTTATTGTGCAGACTTTCTTTGACTGATAGTTCCCCGTGGCTAGTGGGTGGGGATTTTAATGAAATTTTGT
TGGATAAGGAGAAGCTAGGAGGTCCTGTTAGAGGTGGGAGTCTGCTAAATAATTTGAGGGAGGCATTGGATGATTGTCAGCTGGTTGACATTGGTTACTATGGTCCTAAT
TTTACTTGGAATGGAAGAAAAGTAGGTGTGCTTCTTTGGGAAAGATTGGATAGATTTGTGTGTTCAAATTCCTTTAATTTATTTGACAAGGTGGCTATAAGTCATCTTGG
TTGGCTTTTTCTGATCATCGTCCAATTATGA
Protein sequenceShow/hide protein sequence
MAVVGGGDWSRPVTVVGGGGQRALLPKGKSWRFTGVYGYPETHRKHLTWELLCRLSLTDSSPWLVGGDFNEILLDKEKLGGPVRGGSLLNNLREALDDCQLVDIGYYGPN
FTWNGRKVGVLLWERLDRFVCSNSFNLFDKVAISHLGWLFLIIVQL