| GenBank top hits | e value | %identity | Alignment |
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| MCI00094.1 putative gag-pol polyprotein [Trifolium medium] | 1.4e-06 | 45.21 | Show/hide |
Query: MSSTCSSDNCYLWIPNVANHV--CNIFKYYEIVFLHKKLGQVSLYLVKKAILEEVILGTPCLRSEDEAVWGDC
M S DNCYLW+P NH+ C I K E+ H+KLG + L +KKAI EE I G P L E+ + G+C
Subjt: MSSTCSSDNCYLWIPNVANHV--CNIFKYYEIVFLHKKLGQVSLYLVKKAILEEVILGTPCLRSEDEAVWGDC
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| PNX60280.1 gag-pol polyprotein, partial [Trifolium pratense] | 1.8e-06 | 45.21 | Show/hide |
Query: MSSTCSSDNCYLWIPNVANHV--CNIFKYYEIVFLHKKLGQVSLYLVKKAILEEVILGTPCLRSEDEAVWGDC
M + S DNCYLW+P ++ C I K E+ H+KLGQ++L +KKAI EE I G P L E+ + GDC
Subjt: MSSTCSSDNCYLWIPNVANHV--CNIFKYYEIVFLHKKLGQVSLYLVKKAILEEVILGTPCLRSEDEAVWGDC
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| PNX79393.1 gag-pol polyprotein [Trifolium pratense] | 2.4e-06 | 43.84 | Show/hide |
Query: MSSTCSSDNCYLWIPNVANHV--CNIFKYYEIVFLHKKLGQVSLYLVKKAILEEVILGTPCLRSEDEAVWGDC
M S DNCYLW+P N++ C I K E+ H+KLG + L +KKAI EE I G P L+ E+ ++ G+C
Subjt: MSSTCSSDNCYLWIPNVANHV--CNIFKYYEIVFLHKKLGQVSLYLVKKAILEEVILGTPCLRSEDEAVWGDC
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| PNX94530.1 gag-pol polyprotein, partial [Trifolium pratense] | 2.4e-06 | 42.47 | Show/hide |
Query: MSSTCSSDNCYLWIPNVANHV--CNIFKYYEIVFLHKKLGQVSLYLVKKAILEEVILGTPCLRSEDEAVWGDC
M T S DNCYLW+P ++ C I K E+ H+KLG +++ +KKAI EE I G P L+ E++ + G+C
Subjt: MSSTCSSDNCYLWIPNVANHV--CNIFKYYEIVFLHKKLGQVSLYLVKKAILEEVILGTPCLRSEDEAVWGDC
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| PNX99503.1 gag-protease polyprotein, partial [Trifolium pratense] | 2.4e-06 | 43.84 | Show/hide |
Query: MSSTCSSDNCYLWIPNVANHV--CNIFKYYEIVFLHKKLGQVSLYLVKKAILEEVILGTPCLRSEDEAVWGDC
M S DNCYLW+P +V C I K E+ H++LG ++L +KKAI EE I G P L+ E+ ++ GDC
Subjt: MSSTCSSDNCYLWIPNVANHV--CNIFKYYEIVFLHKKLGQVSLYLVKKAILEEVILGTPCLRSEDEAVWGDC
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2K3K214 Gag-pol polyprotein (Fragment) | 8.9e-07 | 45.21 | Show/hide |
Query: MSSTCSSDNCYLWIPNVANHV--CNIFKYYEIVFLHKKLGQVSLYLVKKAILEEVILGTPCLRSEDEAVWGDC
M + S DNCYLW+P ++ C I K E+ H+KLGQ++L +KKAI EE I G P L E+ + GDC
Subjt: MSSTCSSDNCYLWIPNVANHV--CNIFKYYEIVFLHKKLGQVSLYLVKKAILEEVILGTPCLRSEDEAVWGDC
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| A0A2K3LLJ1 Gag-pol polyprotein | 1.2e-06 | 43.84 | Show/hide |
Query: MSSTCSSDNCYLWIPNVANHV--CNIFKYYEIVFLHKKLGQVSLYLVKKAILEEVILGTPCLRSEDEAVWGDC
M S DNCYLW+P N++ C I K E+ H+KLG + L +KKAI EE I G P L+ E+ ++ G+C
Subjt: MSSTCSSDNCYLWIPNVANHV--CNIFKYYEIVFLHKKLGQVSLYLVKKAILEEVILGTPCLRSEDEAVWGDC
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| A0A2K3MUQ4 Gag-pol polyprotein (Fragment) | 1.2e-06 | 42.47 | Show/hide |
Query: MSSTCSSDNCYLWIPNVANHV--CNIFKYYEIVFLHKKLGQVSLYLVKKAILEEVILGTPCLRSEDEAVWGDC
M T S DNCYLW+P ++ C I K E+ H+KLG +++ +KKAI EE I G P L+ E++ + G+C
Subjt: MSSTCSSDNCYLWIPNVANHV--CNIFKYYEIVFLHKKLGQVSLYLVKKAILEEVILGTPCLRSEDEAVWGDC
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| A0A2K3N8X7 Gag-protease polyprotein (Fragment) | 1.2e-06 | 43.84 | Show/hide |
Query: MSSTCSSDNCYLWIPNVANHV--CNIFKYYEIVFLHKKLGQVSLYLVKKAILEEVILGTPCLRSEDEAVWGDC
M S DNCYLW+P +V C I K E+ H++LG ++L +KKAI EE I G P L+ E+ ++ GDC
Subjt: MSSTCSSDNCYLWIPNVANHV--CNIFKYYEIVFLHKKLGQVSLYLVKKAILEEVILGTPCLRSEDEAVWGDC
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| A0A392NL28 Putative gag-pol polyprotein (Fragment) | 6.8e-07 | 45.21 | Show/hide |
Query: MSSTCSSDNCYLWIPNVANHV--CNIFKYYEIVFLHKKLGQVSLYLVKKAILEEVILGTPCLRSEDEAVWGDC
M S DNCYLW+P NH+ C I K E+ H+KLG + L +KKAI EE I G P L E+ + G+C
Subjt: MSSTCSSDNCYLWIPNVANHV--CNIFKYYEIVFLHKKLGQVSLYLVKKAILEEVILGTPCLRSEDEAVWGDC
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