; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10021483 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021483
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProline-rich protein HaeIII subfamily 1-like
Genome locationChr05:9815215..9815433
RNA-Seq ExpressionHG10021483
SyntenyHG10021483
Gene Ontology termsGO:0010227 - floral organ abscission (biological process)
GO:0005615 - extracellular space (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040932.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa]1.0e-1266.67Show/hide
Query:  MLSKNVRTPPFGPSRRTSDNLPPPTYVPSIILHRESRINFGILPKGVRIPLFGPSDRTSNYPPPPL
        +LSK +RTPP G S+ TS+N PP  +V  IILH+ES +NFGILPKGVRIP  GPS RTS+ PPPPL
Subjt:  MLSKNVRTPPFGPSRRTSDNLPPPTYVPSIILHRESRINFGILPKGVRIPLFGPSDRTSNYPPPPL

KAG6603169.1 hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sororia]6.8e-1767.12Show/hide
Query:  MLSKNVRTPPFGPSRRTSDNLPPPTYVPSIILHRESRINFGILPKGVRIPLFGPSDRTSNY-PPPPLHAPSVI
        ML K V  PP GPS+RTSD  PPP    S+IL+++S+INFG+LPKGV IP  GPS RTSNY PPPPLHA SVI
Subjt:  MLSKNVRTPPFGPSRRTSDNLPPPTYVPSIILHRESRINFGILPKGVRIPLFGPSDRTSNY-PPPPLHAPSVI

XP_022967687.1 actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima]7.5e-1662.5Show/hide
Query:  MLSKNVRTPPFGPSRRTSDNLPPPTYVPSIILHRESRINFGILPKGVRIPLFGPSDRTSNYPPPPLHAPSVI
        ML + V  PP GPS+RTSD  PPP +  S+IL+++S+INFG+LPKGV IP  GPS RTS YPPPP  A SVI
Subjt:  MLSKNVRTPPFGPSRRTSDNLPPPTYVPSIILHRESRINFGILPKGVRIPLFGPSDRTSNYPPPPLHAPSVI

XP_031744003.1 abl interactor homolog [Cucumis sativus]1.9e-1156.94Show/hide
Query:  MLSKNVRTPPFGPSRRTSDNLPPPTYVPSIILHRESRINFGILPKGVRIPLFGPSDRTSNYPPPPLHAPSVI
        +LSK++R PPFGPS+R+SD+ PP    PSI+LH+ESR+NFGIL KGVR    G S R S+ PP P   PS++
Subjt:  MLSKNVRTPPFGPSRRTSDNLPPPTYVPSIILHRESRINFGILPKGVRIPLFGPSDRTSNYPPPPLHAPSVI

XP_038882352.1 uncharacterized protein LOC120073615 [Benincasa hispida]3.4e-1662.5Show/hide
Query:  MLSKNVRTPPFGPSRRTSDNLPPPTYVPSIILHRESRINFGILPKGVRIPLFGPSDRTSNYPPPPLHAPSVI
        +LSK  R PP GPS+RTS++ PPP +  S+ILH++  INFGILPK + IP  GPS R SNYP PP HAPSVI
Subjt:  MLSKNVRTPPFGPSRRTSDNLPPPTYVPSIILHRESRINFGILPKGVRIPLFGPSDRTSNYPPPPLHAPSVI

TrEMBL top hitse value%identityAlignment
A0A5A7T8R0 Uncharacterized protein1.6e-1163.79Show/hide
Query:  MLSKNVRTPPFGPSRRTSDNLPPPTYVPSIILHRESRINFGILPKGVRIPLFGPSDRT
        +L K+VRTPPFG S+RT DN  PP +   IILH++S+I FGILPKGVR+P  GPS RT
Subjt:  MLSKNVRTPPFGPSRRTSDNLPPPTYVPSIILHRESRINFGILPKGVRIPLFGPSDRT

A0A5D3BP86 Proline-rich protein HaeIII subfamily 1-like1.0e-1063.08Show/hide
Query:  MLSKNVRTPPFGPSRRTSDNLPPPTYVPSIILHRESRINFGILPKGVRIPLFGPSDRTSNYPPPP
        + SK+VR PP GPS+R+SD+  PP+  PS+IL +ESRINFGILPKG RIP  GPS R S+ P PP
Subjt:  MLSKNVRTPPFGPSRRTSDNLPPPTYVPSIILHRESRINFGILPKGVRIPLFGPSDRTSNYPPPP

A0A5D3BVE5 Uncharacterized protein1.7e-1063.79Show/hide
Query:  MLSKNVRTPPFGPSRRTSDNLPPPTYVPSIILHRESRINFGILPKGVRIPLFGPSDRT
        +LSK+VRTPP G S+RT DN   P +V  IILH++SRI FGILPKGV +P  GPS RT
Subjt:  MLSKNVRTPPFGPSRRTSDNLPPPTYVPSIILHRESRINFGILPKGVRIPLFGPSDRT

A0A5D3CGG1 Proline-rich protein HaeIII subfamily 1-like4.9e-1366.67Show/hide
Query:  MLSKNVRTPPFGPSRRTSDNLPPPTYVPSIILHRESRINFGILPKGVRIPLFGPSDRTSNYPPPPL
        +LSK +RTPP G S+ TS+N PP  +V  IILH+ES +NFGILPKGVRIP  GPS RTS+ PPPPL
Subjt:  MLSKNVRTPPFGPSRRTSDNLPPPTYVPSIILHRESRINFGILPKGVRIPLFGPSDRTSNYPPPPL

A0A6J1HRH7 actin cytoskeleton-regulatory complex protein PAN1-like3.6e-1662.5Show/hide
Query:  MLSKNVRTPPFGPSRRTSDNLPPPTYVPSIILHRESRINFGILPKGVRIPLFGPSDRTSNYPPPPLHAPSVI
        ML + V  PP GPS+RTSD  PPP +  S+IL+++S+INFG+LPKGV IP  GPS RTS YPPPP  A SVI
Subjt:  MLSKNVRTPPFGPSRRTSDNLPPPTYVPSIILHRESRINFGILPKGVRIPLFGPSDRTSNYPPPPLHAPSVI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATCGAAAAACGTACGTACTCCTCCGTTTGGGCCAAGTAGAAGAACTTCAGACAATCTACCTCCCCCAACGTATGTCCCTTCCATCATTTTACATAGGGAGTCTAG
GATCAATTTTGGAATATTACCAAAAGGTGTACGCATTCCTCTGTTTGGGCCGAGTGACAGAACCTCAAATTATCCACCACCTCCACTGCATGCTCCTTCTGTTATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTATCGAAAAACGTACGTACTCCTCCGTTTGGGCCAAGTAGAAGAACTTCAGACAATCTACCTCCCCCAACGTATGTCCCTTCCATCATTTTACATAGGGAGTCTAG
GATCAATTTTGGAATATTACCAAAAGGTGTACGCATTCCTCTGTTTGGGCCGAGTGACAGAACCTCAAATTATCCACCACCTCCACTGCATGCTCCTTCTGTTATTTGA
Protein sequenceShow/hide protein sequence
MLSKNVRTPPFGPSRRTSDNLPPPTYVPSIILHRESRINFGILPKGVRIPLFGPSDRTSNYPPPPLHAPSVI