; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10021505 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021505
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionE3 ubiquitin-protein ligase arih1
Genome locationChr05:10228193..10231827
RNA-Seq ExpressionHG10021505
SyntenyHG10021505
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsIPR002867 - IBR domain
IPR031127 - E3 ubiquitin ligase RBR family
IPR044066 - TRIAD supradomain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145453.1 E3 ubiquitin-protein ligase arih1 [Cucumis sativus]2.6e-11751.45Show/hide
Query:  AEEDDVEDFRSCCEDHEVWKETEDAVEEESEEDLDEFSVKMFFKGVSIAEIGDPASGLS---------------------------------ALMDGLVE
        AEEDDVEDFRSCCEDHEVWKETEDAVEEESEEDLDEFSVKMFFKGVSIAEIGD ASGLS                                 ALMDGLVE
Subjt:  AEEDDVEDFRSCCEDHEVWKETEDAVEEESEEDLDEFSVKMFFKGVSIAEIGDPASGLS---------------------------------ALMDGLVE

Query:  AMQNDIHRIRAFTDSDLLYK--------------------------------------------------------------------------------
        AMQND+  IRAFT SDLLYK                                                                                
Subjt:  AMQNDIHRIRAFTDSDLLYK--------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------QRFICVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLSI-DGQQTCQCAFWD
               QRFICVECQVPWHSS+SCEEFQN+PLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGC+HMTCWCGHEFCYSCG+   DGQQTCQCAFWD
Subjt:  -------QRFICVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLSI-DGQQTCQCAFWD

Query:  EDDSENLVTHSVQESEQWAWETFNSLPMIMDAYSEQERSQIALIQRFLAGGFSLSDHQPYQSPPRCTDSYVDTMKDIHQLPWLE
        ED+SENLVTHSVQESEQWAWETFNSLPMIMDAYSEQERSQ+ALIQRFLAGGFSLSDHQP QSPPRCTDSYVDTMKDIHQLPWLE
Subjt:  EDDSENLVTHSVQESEQWAWETFNSLPMIMDAYSEQERSQIALIQRFLAGGFSLSDHQPYQSPPRCTDSYVDTMKDIHQLPWLE

XP_008459101.1 PREDICTED: E3 ubiquitin-protein ligase arih1 [Cucumis melo]1.6e-11951.86Show/hide
Query:  AEEDDVEDFRSCCEDHEVWKETEDAVEEESEEDLDEFSVKMFFKGVSIAEIGDPASGLS---------------------------------ALMDGLVE
        AEEDDVE+FRSCCEDHEVWKETEDAVEEESEEDLDEFSVKMFFKGVSIAEIGDPASGLS                                 ALMDGLVE
Subjt:  AEEDDVEDFRSCCEDHEVWKETEDAVEEESEEDLDEFSVKMFFKGVSIAEIGDPASGLS---------------------------------ALMDGLVE

Query:  AMQNDIHRIRAFTDSDLLYK--------------------------------------------------------------------------------
        AMQND+  IRAFTDSDLLYK                                                                                
Subjt:  AMQNDIHRIRAFTDSDLLYK--------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------QRFICVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLSI-DGQQTCQCAFWD
               QRFICVECQVPWHSS+SCEEFQN+PLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGC+HMTCWCGHEFCYSCG+   DGQQTCQCAFWD
Subjt:  -------QRFICVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLSI-DGQQTCQCAFWD

Query:  EDDSENLVTHSVQESEQWAWETFNSLPMIMDAYSEQERSQIALIQRFLAGGFSLSDHQPYQSPPRCTDSYVDTMKDIHQLPWLE
        ED+SENLVTHSVQESEQWAWETFNSLPMIMDAYSEQERSQ+ALIQRFLAGGFSLSDHQPYQSPPRCTDSYVDTMKDIHQLPWLE
Subjt:  EDDSENLVTHSVQESEQWAWETFNSLPMIMDAYSEQERSQIALIQRFLAGGFSLSDHQPYQSPPRCTDSYVDTMKDIHQLPWLE

XP_022927282.1 ATP-dependent RNA helicase DEAH12, chloroplastic-like isoform X1 [Cucurbita moschata]7.0e-10748.36Show/hide
Query:  MAEEDDVEDFRSCCEDHEVWKETEDAVEEES--EEDLDEFSVKMFFKGVSIAEIGDPASGLS---------------------------------ALMDG
        +AE+DD EDFRSCCEDHEVWK+ E A EE+S  EEDLDEFSVK+FFKGVSIA IGDPASGLS                                 ALMDG
Subjt:  MAEEDDVEDFRSCCEDHEVWKETEDAVEEES--EEDLDEFSVKMFFKGVSIAEIGDPASGLS---------------------------------ALMDG

Query:  LVEAMQNDIHRIRAFTDSDLLYK-----------------------------------------------------------------------------
        LVEAMQNDIH IRAFTDSD LYK                                                                             
Subjt:  LVEAMQNDIHRIRAFTDSDLLYK-----------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------QRFICVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLSI-DGQQTCQCA
                  QRFICVECQVPWHSSMSCEEFQNVPLEERDTADITL  LAQNKRWRRCQEC RMIELTQGCYHMTCWCGHEFCYSCG    DGQQTC+C 
Subjt:  ----------QRFICVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLSI-DGQQTCQCA

Query:  FWDEDDSENLVTHSVQESEQWAWETFNSLPMIMDAYSEQERSQIALIQRFLAGGFSLSDHQPYQSPPRCTD-SYVDTMKDIHQLPWLE
         WDE++SE++VTHS+QESEQWAWETFNSLPMIMD YSEQERSQ+ALIQRFLAGGFSLSDHQPYQSPPRCTD SYVDTMKDIHQLPWLE
Subjt:  FWDEDDSENLVTHSVQESEQWAWETFNSLPMIMDAYSEQERSQIALIQRFLAGGFSLSDHQPYQSPPRCTD-SYVDTMKDIHQLPWLE

XP_023519477.1 E3 ubiquitin-protein ligase arih1-like isoform X1 [Cucurbita pepo subsp. pepo]8.3e-10848.77Show/hide
Query:  MAEEDDVEDFRSCCEDHEVWKETEDAVEEES--EEDLDEFSVKMFFKGVSIAEIGDPASGLS---------------------------------ALMDG
        +AEEDD EDFRSCCEDHEVWKE E A EE+S  EEDLDEFSVK+FFKGVSIA IGDPASGLS                                 ALMDG
Subjt:  MAEEDDVEDFRSCCEDHEVWKETEDAVEEES--EEDLDEFSVKMFFKGVSIAEIGDPASGLS---------------------------------ALMDG

Query:  LVEAMQNDIHRIRAFTDSDLLYK-----------------------------------------------------------------------------
        LVEAMQNDIH IRAFTDSD LYK                                                                             
Subjt:  LVEAMQNDIHRIRAFTDSDLLYK-----------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------QRFICVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLSI-DGQQTCQCA
                  QRFICVECQVPWHSSMSCEEFQNVPLEERD ADITLH LAQNKRWRRC+EC RMIELTQGCYHMTCWCGHEFCYSCG    DGQQTC+CA
Subjt:  ----------QRFICVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLSI-DGQQTCQCA

Query:  FWDEDDSENLVTHSVQESEQWAWETFNSLPMIMDAYSEQERSQIALIQRFLAGGFSLSDHQPYQSPPRCTD-SYVDTMKDIHQLPWLE
         WDE++SE++VTHS+QESEQWAWETFNSLPMIMDAYSEQERSQ+ALIQRFLAGGFSLSDHQPYQSPP+CTD SYVDTMKDIHQLPWLE
Subjt:  FWDEDDSENLVTHSVQESEQWAWETFNSLPMIMDAYSEQERSQIALIQRFLAGGFSLSDHQPYQSPPRCTD-SYVDTMKDIHQLPWLE

XP_038894440.1 uncharacterized protein LOC120083025 [Benincasa hispida]4.8e-11651.24Show/hide
Query:  AEEDDVEDFRSCCEDHEVWKETEDAVEEESEEDLDEFSVKMFFKGVSIAEIGDPASGLS---------------------------------ALMDGLVE
        AEED+VEDFRSCCEDHEVWKETE+AVEEES EDLDEFSVKMFFKGVSIAEIGDPASGLS                                 ALMDGLVE
Subjt:  AEEDDVEDFRSCCEDHEVWKETEDAVEEESEEDLDEFSVKMFFKGVSIAEIGDPASGLS---------------------------------ALMDGLVE

Query:  AMQNDIHRIRAFTDSDLLYK--------------------------------------------------------------------------------
        AMQND+  IRAFTDSDLLYK                                                                                
Subjt:  AMQNDIHRIRAFTDSDLLYK--------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------QRFICVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLSI-DGQQTCQCAFWD
               QRFICVECQVPWHSSMSCEEFQ+VPLEERDTADITLHRLAQNKRWRRCQECHRMIEL  GCYHMTCWCGHEFCYSCG+   DG+QTCQCAFWD
Subjt:  -------QRFICVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLSI-DGQQTCQCAFWD

Query:  EDDSENLVTHSVQESEQWAWETFNSLPMIMDAYSEQERSQIALIQRFLAGGFSLSDHQPYQSPPRCTDSYVDTMKDIHQLPWLE
        EDDSEN+VTHSVQESEQWAWETFNSLPMIMDAYSEQERSQ+ALIQRFLAGGFSLSDHQPYQSPPRCTDSYVDTMKDIHQLPWLE
Subjt:  EDDSENLVTHSVQESEQWAWETFNSLPMIMDAYSEQERSQIALIQRFLAGGFSLSDHQPYQSPPRCTDSYVDTMKDIHQLPWLE

TrEMBL top hitse value%identityAlignment
A0A0A0M0W5 Uncharacterized protein1.2e-11751.45Show/hide
Query:  AEEDDVEDFRSCCEDHEVWKETEDAVEEESEEDLDEFSVKMFFKGVSIAEIGDPASGLS---------------------------------ALMDGLVE
        AEEDDVEDFRSCCEDHEVWKETEDAVEEESEEDLDEFSVKMFFKGVSIAEIGD ASGLS                                 ALMDGLVE
Subjt:  AEEDDVEDFRSCCEDHEVWKETEDAVEEESEEDLDEFSVKMFFKGVSIAEIGDPASGLS---------------------------------ALMDGLVE

Query:  AMQNDIHRIRAFTDSDLLYK--------------------------------------------------------------------------------
        AMQND+  IRAFT SDLLYK                                                                                
Subjt:  AMQNDIHRIRAFTDSDLLYK--------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------QRFICVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLSI-DGQQTCQCAFWD
               QRFICVECQVPWHSS+SCEEFQN+PLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGC+HMTCWCGHEFCYSCG+   DGQQTCQCAFWD
Subjt:  -------QRFICVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLSI-DGQQTCQCAFWD

Query:  EDDSENLVTHSVQESEQWAWETFNSLPMIMDAYSEQERSQIALIQRFLAGGFSLSDHQPYQSPPRCTDSYVDTMKDIHQLPWLE
        ED+SENLVTHSVQESEQWAWETFNSLPMIMDAYSEQERSQ+ALIQRFLAGGFSLSDHQP QSPPRCTDSYVDTMKDIHQLPWLE
Subjt:  EDDSENLVTHSVQESEQWAWETFNSLPMIMDAYSEQERSQIALIQRFLAGGFSLSDHQPYQSPPRCTDSYVDTMKDIHQLPWLE

A0A1S3C9E4 E3 ubiquitin-protein ligase arih17.8e-12051.86Show/hide
Query:  AEEDDVEDFRSCCEDHEVWKETEDAVEEESEEDLDEFSVKMFFKGVSIAEIGDPASGLS---------------------------------ALMDGLVE
        AEEDDVE+FRSCCEDHEVWKETEDAVEEESEEDLDEFSVKMFFKGVSIAEIGDPASGLS                                 ALMDGLVE
Subjt:  AEEDDVEDFRSCCEDHEVWKETEDAVEEESEEDLDEFSVKMFFKGVSIAEIGDPASGLS---------------------------------ALMDGLVE

Query:  AMQNDIHRIRAFTDSDLLYK--------------------------------------------------------------------------------
        AMQND+  IRAFTDSDLLYK                                                                                
Subjt:  AMQNDIHRIRAFTDSDLLYK--------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------QRFICVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLSI-DGQQTCQCAFWD
               QRFICVECQVPWHSS+SCEEFQN+PLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGC+HMTCWCGHEFCYSCG+   DGQQTCQCAFWD
Subjt:  -------QRFICVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLSI-DGQQTCQCAFWD

Query:  EDDSENLVTHSVQESEQWAWETFNSLPMIMDAYSEQERSQIALIQRFLAGGFSLSDHQPYQSPPRCTDSYVDTMKDIHQLPWLE
        ED+SENLVTHSVQESEQWAWETFNSLPMIMDAYSEQERSQ+ALIQRFLAGGFSLSDHQPYQSPPRCTDSYVDTMKDIHQLPWLE
Subjt:  EDDSENLVTHSVQESEQWAWETFNSLPMIMDAYSEQERSQIALIQRFLAGGFSLSDHQPYQSPPRCTDSYVDTMKDIHQLPWLE

A0A5D3E1X1 E3 ubiquitin-protein ligase arih17.8e-12051.86Show/hide
Query:  AEEDDVEDFRSCCEDHEVWKETEDAVEEESEEDLDEFSVKMFFKGVSIAEIGDPASGLS---------------------------------ALMDGLVE
        AEEDDVE+FRSCCEDHEVWKETEDAVEEESEEDLDEFSVKMFFKGVSIAEIGDPASGLS                                 ALMDGLVE
Subjt:  AEEDDVEDFRSCCEDHEVWKETEDAVEEESEEDLDEFSVKMFFKGVSIAEIGDPASGLS---------------------------------ALMDGLVE

Query:  AMQNDIHRIRAFTDSDLLYK--------------------------------------------------------------------------------
        AMQND+  IRAFTDSDLLYK                                                                                
Subjt:  AMQNDIHRIRAFTDSDLLYK--------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------QRFICVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLSI-DGQQTCQCAFWD
               QRFICVECQVPWHSS+SCEEFQN+PLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGC+HMTCWCGHEFCYSCG+   DGQQTCQCAFWD
Subjt:  -------QRFICVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLSI-DGQQTCQCAFWD

Query:  EDDSENLVTHSVQESEQWAWETFNSLPMIMDAYSEQERSQIALIQRFLAGGFSLSDHQPYQSPPRCTDSYVDTMKDIHQLPWLE
        ED+SENLVTHSVQESEQWAWETFNSLPMIMDAYSEQERSQ+ALIQRFLAGGFSLSDHQPYQSPPRCTDSYVDTMKDIHQLPWLE
Subjt:  EDDSENLVTHSVQESEQWAWETFNSLPMIMDAYSEQERSQIALIQRFLAGGFSLSDHQPYQSPPRCTDSYVDTMKDIHQLPWLE

A0A6J1EGQ6 ATP-dependent RNA helicase DEAH12, chloroplastic-like isoform X13.4e-10748.36Show/hide
Query:  MAEEDDVEDFRSCCEDHEVWKETEDAVEEES--EEDLDEFSVKMFFKGVSIAEIGDPASGLS---------------------------------ALMDG
        +AE+DD EDFRSCCEDHEVWK+ E A EE+S  EEDLDEFSVK+FFKGVSIA IGDPASGLS                                 ALMDG
Subjt:  MAEEDDVEDFRSCCEDHEVWKETEDAVEEES--EEDLDEFSVKMFFKGVSIAEIGDPASGLS---------------------------------ALMDG

Query:  LVEAMQNDIHRIRAFTDSDLLYK-----------------------------------------------------------------------------
        LVEAMQNDIH IRAFTDSD LYK                                                                             
Subjt:  LVEAMQNDIHRIRAFTDSDLLYK-----------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------QRFICVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLSI-DGQQTCQCA
                  QRFICVECQVPWHSSMSCEEFQNVPLEERDTADITL  LAQNKRWRRCQEC RMIELTQGCYHMTCWCGHEFCYSCG    DGQQTC+C 
Subjt:  ----------QRFICVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLSI-DGQQTCQCA

Query:  FWDEDDSENLVTHSVQESEQWAWETFNSLPMIMDAYSEQERSQIALIQRFLAGGFSLSDHQPYQSPPRCTD-SYVDTMKDIHQLPWLE
         WDE++SE++VTHS+QESEQWAWETFNSLPMIMD YSEQERSQ+ALIQRFLAGGFSLSDHQPYQSPPRCTD SYVDTMKDIHQLPWLE
Subjt:  FWDEDDSENLVTHSVQESEQWAWETFNSLPMIMDAYSEQERSQIALIQRFLAGGFSLSDHQPYQSPPRCTD-SYVDTMKDIHQLPWLE

A0A6J1EKK2 probable E3 ubiquitin-protein ligase rbrA isoform X28.4e-10649.57Show/hide
Query:  MAEEDDVEDFRSCCEDHEVWKETEDAVEEES--EEDLDEFSVKMFFKGVSIAEIGDPASGLSAL-----MDGLVEAMQNDIHRIRAFTDSDLLYK-----
        +AE+DD EDFRSCCEDHEVWK+ E A EE+S  EEDLDEFSVK+FFKGVSIA IGDPASGLS +       G V  +QNDIH IRAFTDSD LYK     
Subjt:  MAEEDDVEDFRSCCEDHEVWKETEDAVEEES--EEDLDEFSVKMFFKGVSIAEIGDPASGLSAL-----MDGLVEAMQNDIHRIRAFTDSDLLYK-----

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------QRFICVECQVPWHSSMSC
                                                                                          QRFICVECQVPWHSSMSC
Subjt:  ----------------------------------------------------------------------------------QRFICVECQVPWHSSMSC

Query:  EEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLSI-DGQQTCQCAFWDEDDSENLVTHSVQESEQWAWETFNS
        EEFQNVPLEERDTADITL  LAQNKRWRRCQEC RMIELTQGCYHMTCWCGHEFCYSCG    DGQQTC+C  WDE++SE++VTHS+QESEQWAWETFNS
Subjt:  EEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLSI-DGQQTCQCAFWDEDDSENLVTHSVQESEQWAWETFNS

Query:  LPMIMDAYSEQERSQIALIQRFLAGGFSLSDHQPYQSPPRCTD-SYVDTMKDIHQLPWLE
        LPMIMD YSEQERSQ+ALIQRFLAGGFSLSDHQPYQSPPRCTD SYVDTMKDIHQLPWLE
Subjt:  LPMIMDAYSEQERSQIALIQRFLAGGFSLSDHQPYQSPPRCTD-SYVDTMKDIHQLPWLE

SwissProt top hitse value%identityAlignment
D3YYI7 Probable E3 ubiquitin-protein ligase RNF2171.9e-0635.14Show/hide
Query:  CVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTC-WCGHEFCYSCG
        C +C  PWH  ++C+E++      R  A    H     +  ++C +C   I+ T+GC HMTC  C   FCY CG
Subjt:  CVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTC-WCGHEFCYSCG

F4KGU4 ATP-dependent RNA helicase DEAH12, chloroplastic2.9e-0732.88Show/hide
Query:  ICVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSC
        IC  C + +H  ++CE ++      ++  D++L   A+ K  + C  C   IE T GC HM C CG   C++C
Subjt:  ICVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSC

P58283 E3 ubiquitin-protein ligase RNF2161.7e-0727.71Show/hide
Query:  PASGLSALMDGLVEAMQNDIHRIRAFTDSDLLYKQRFICVECQVPW--HSSMSCEEFQNVPLEERDTADITLHRLAQNK----RWRRCQECHRMIELTQG
        P+    AL+D  V+       R R  T           C +CQ  W  H+ ++CEE     L E+D  DI      + K    R R+C +C   +  ++G
Subjt:  PASGLSALMDGLVEAMQNDIHRIRAFTDSDLLYKQRFICVECQVPW--HSSMSCEEFQNVPLEERDTADITLHRLAQNK----RWRRCQECHRMIELTQG

Query:  CYHMTCWCGHEFCYSCGLSIDG---------------QQTCQCAFWDE--DDSENLVTHSVQESEQ
        C  M+C CG + CY C +SI+G               Q+  +C+ W +  +D E L+    +E+E+
Subjt:  CYHMTCWCGHEFCYSCGLSIDG---------------QQTCQCAFWDE--DDSENLVTHSVQESEQ

Q8TC41 Probable E3 ubiquitin-protein ligase RNF2171.9e-0635.14Show/hide
Query:  CVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTC-WCGHEFCYSCG
        C +C  PWH  ++C+E++      R  A    H     +  ++C +C   I+ T+GC HMTC  C   FCY CG
Subjt:  CVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTC-WCGHEFCYSCG

Q9NWF9 E3 ubiquitin-protein ligase RNF2163.8e-0729.69Show/hide
Query:  CVECQVPW--HSSMSCEEFQNVPLEERDTADITLHRLAQNK----RWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLSIDG---------------Q
        C +CQ  W  H+ ++CEE     L E+D  DI      + K    R R+C +C   +  ++GC  M+C CG + CY C +SI+G               Q
Subjt:  CVECQVPW--HSSMSCEEFQNVPLEERDTADITLHRLAQNK----RWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLSIDG---------------Q

Query:  QTCQCAFWDE--DDSENLVTHSVQESEQ
        +  +C+ W +  +D E L+    +E+E+
Subjt:  QTCQCAFWDE--DDSENLVTHSVQESEQ

Arabidopsis top hitse value%identityAlignment
AT3G45470.1 IBR domain containing protein4.8e-2140.95Show/hide
Query:  QNDIHRIRAFTDSDLLYKQRFICVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLS-ID
        + +I R     D   +     +C++C+VPWHS +SC E++ +   +    D+TL  LA +++WR+C +C  +IEL QGC HMTC CG++FCY CG+    
Subjt:  QNDIHRIRAFTDSDLLYKQRFICVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLS-ID

Query:  GQQTC
        GQ TC
Subjt:  GQQTC

AT4G19670.1 RING/U-box superfamily protein1.9e-7068.65Show/hide
Query:  QRFICVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLSI-DGQQTCQCAFWDEDDSEN-
        +RF+CV+C VPWH+SMSCEEFQ +P++ER   DITLHRLA+ KRWRRCQ+C  MIEL QGC HMTC CGHEFCYSCG    +GQQTC CAFWD+D+ E  
Subjt:  QRFICVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLSI-DGQQTCQCAFWDEDDSEN-

Query:  --LVTHSVQESEQWAWETFNSLPMIMDAYSEQERSQIALIQRFLA-GGFSLSDHQ-PYQS-PPRCTD-SYVD-TMKDIHQLPWLE
          +  +++QE EQW W+TFNS+P +MDAYSEQERSQ+ALIQRFLA GGFSLSDH   YQS PP CT+ SYV+  MKD+HQLPWLE
Subjt:  --LVTHSVQESEQWAWETFNSLPMIMDAYSEQERSQIALIQRFLA-GGFSLSDHQ-PYQS-PPRCTD-SYVD-TMKDIHQLPWLE

AT4G19670.1 RING/U-box superfamily protein1.1e-0951.28Show/hide
Query:  DVEDFRSCCEDHEVWKETED----AVEEESEEDL-DEFSVKMFFKGVSIAEIGDPASGLSALMDGLVEAMQNDIHRIR
        D E+FRSCC D E+W +  D     VEEE ++DL DEFSVKM FKGVSI E GD  SG S +  G+V     D+  I+
Subjt:  DVEDFRSCCEDHEVWKETED----AVEEESEEDL-DEFSVKMFFKGVSIAEIGDPASGLSALMDGLVEAMQNDIHRIR

AT4G19670.2 RING/U-box superfamily protein1.9e-7068.65Show/hide
Query:  QRFICVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLSI-DGQQTCQCAFWDEDDSEN-
        +RF+CV+C VPWH+SMSCEEFQ +P++ER   DITLHRLA+ KRWRRCQ+C  MIEL QGC HMTC CGHEFCYSCG    +GQQTC CAFWD+D+ E  
Subjt:  QRFICVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLSI-DGQQTCQCAFWDEDDSEN-

Query:  --LVTHSVQESEQWAWETFNSLPMIMDAYSEQERSQIALIQRFLA-GGFSLSDHQ-PYQS-PPRCTD-SYVD-TMKDIHQLPWLE
          +  +++QE EQW W+TFNS+P +MDAYSEQERSQ+ALIQRFLA GGFSLSDH   YQS PP CT+ SYV+  MKD+HQLPWLE
Subjt:  --LVTHSVQESEQWAWETFNSLPMIMDAYSEQERSQIALIQRFLA-GGFSLSDHQ-PYQS-PPRCTD-SYVD-TMKDIHQLPWLE

AT4G19670.2 RING/U-box superfamily protein1.1e-0951.28Show/hide
Query:  DVEDFRSCCEDHEVWKETED----AVEEESEEDL-DEFSVKMFFKGVSIAEIGDPASGLSALMDGLVEAMQNDIHRIR
        D E+FRSCC D E+W +  D     VEEE ++DL DEFSVKM FKGVSI E GD  SG S +  G+V     D+  I+
Subjt:  DVEDFRSCCEDHEVWKETED----AVEEESEEDL-DEFSVKMFFKGVSIAEIGDPASGLSALMDGLVEAMQNDIHRIR

AT5G37560.1 RING/U-box superfamily protein4.1e-2044.09Show/hide
Query:  CVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLSIDGQQTCQCAFWDEDDSE
        C++C+VPWHS +SC +++ +   ER   D+ L  LA ++ WR+C EC  MIELT+GC H+TC CG+EFCY CG          C   D  + E
Subjt:  CVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLSIDGQQTCQCAFWDEDDSE

AT5G60250.1 zinc finger (C3HC4-type RING finger) family protein9.7e-2248.39Show/hide
Query:  CVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCG---LSIDGQQTCQCAFWDED
        CV+C+VPWH ++SC E++ +   E    D+ L  LA NK WR+C +C  MIEL+QGC H+TC CGHEFCY+CG     I G    +C  W+E+
Subjt:  CVECQVPWHSSMSCEEFQNVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCG---LSIDGQQTCQCAFWDED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAGGAAGATGATGTTGAAGATTTTCGAAGTTGTTGTGAAGATCACGAAGTATGGAAAGAGACTGAGGATGCAGTGGAAGAAGAGTCCGAGGAGGATCTTGATGA
GTTTTCGGTGAAAATGTTCTTTAAGGGCGTTTCTATAGCTGAGATTGGTGACCCTGCTTCTGGTCTTTCTGCTCTAATGGATGGTCTGGTGGAGGCCATGCAGAATGACA
TCCACCGTATTCGAGCTTTCACCGACTCTGATCTGTTATATAAACAGAGATTTATCTGTGTTGAGTGTCAAGTTCCTTGGCACTCATCAATGAGCTGCGAAGAATTTCAG
AACGTCCCATTAGAGGAGAGAGACACTGCAGATATTACCTTACATCGTCTTGCACAAAACAAAAGGTGGAGGCGTTGCCAGGAGTGTCATAGGATGATTGAATTGACTCA
AGGTTGCTACCATATGACATGCTGGTGTGGCCATGAATTCTGCTATTCTTGTGGGTTGAGTATCGATGGGCAACAGACCTGCCAATGCGCATTTTGGGACGAAGACGATT
CTGAGAACCTGGTCACCCACTCTGTCCAAGAATCCGAGCAGTGGGCATGGGAGACTTTTAATTCCCTCCCCATGATTATGGATGCATACTCAGAGCAAGAGAGGTCACAA
ATAGCACTAATTCAACGATTCCTCGCTGGGGGATTTAGTCTGAGCGACCACCAACCATATCAATCTCCACCACGGTGTACAGACTCTTATGTCGACACTATGAAGGACAT
ACACCAACTTCCTTGGCTCGAGGTTCGTTTCTGTGATAAGCGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAGGAAGATGATGTTGAAGATTTTCGAAGTTGTTGTGAAGATCACGAAGTATGGAAAGAGACTGAGGATGCAGTGGAAGAAGAGTCCGAGGAGGATCTTGATGA
GTTTTCGGTGAAAATGTTCTTTAAGGGCGTTTCTATAGCTGAGATTGGTGACCCTGCTTCTGGTCTTTCTGCTCTAATGGATGGTCTGGTGGAGGCCATGCAGAATGACA
TCCACCGTATTCGAGCTTTCACCGACTCTGATCTGTTATATAAACAGAGATTTATCTGTGTTGAGTGTCAAGTTCCTTGGCACTCATCAATGAGCTGCGAAGAATTTCAG
AACGTCCCATTAGAGGAGAGAGACACTGCAGATATTACCTTACATCGTCTTGCACAAAACAAAAGGTGGAGGCGTTGCCAGGAGTGTCATAGGATGATTGAATTGACTCA
AGGTTGCTACCATATGACATGCTGGTGTGGCCATGAATTCTGCTATTCTTGTGGGTTGAGTATCGATGGGCAACAGACCTGCCAATGCGCATTTTGGGACGAAGACGATT
CTGAGAACCTGGTCACCCACTCTGTCCAAGAATCCGAGCAGTGGGCATGGGAGACTTTTAATTCCCTCCCCATGATTATGGATGCATACTCAGAGCAAGAGAGGTCACAA
ATAGCACTAATTCAACGATTCCTCGCTGGGGGATTTAGTCTGAGCGACCACCAACCATATCAATCTCCACCACGGTGTACAGACTCTTATGTCGACACTATGAAGGACAT
ACACCAACTTCCTTGGCTCGAGGTTCGTTTCTGTGATAAGCGATAG
Protein sequenceShow/hide protein sequence
MAEEDDVEDFRSCCEDHEVWKETEDAVEEESEEDLDEFSVKMFFKGVSIAEIGDPASGLSALMDGLVEAMQNDIHRIRAFTDSDLLYKQRFICVECQVPWHSSMSCEEFQ
NVPLEERDTADITLHRLAQNKRWRRCQECHRMIELTQGCYHMTCWCGHEFCYSCGLSIDGQQTCQCAFWDEDDSENLVTHSVQESEQWAWETFNSLPMIMDAYSEQERSQ
IALIQRFLAGGFSLSDHQPYQSPPRCTDSYVDTMKDIHQLPWLEVRFCDKR