; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10021508 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021508
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionsnRNA-activating protein complex subunit-like isoform X1
Genome locationChr05:10330462..10339100
RNA-Seq ExpressionHG10021508
SyntenyHG10021508
Gene Ontology termsGO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
InterPro domainsIPR022042 - snRNA-activating protein complex, subunit 3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK17049.1 snRNA-activating protein complex subunit-like isoform X1 [Cucumis melo var. makuwa]2.7e-15461.07Show/hide
Query:  MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQE-----------------------------------------LQSDENGNN
        MEARD AGASEE+ LNGDGLSIPLGGPIYAPNLVGPLTRVPHFESS++QE                                         LQSD N NN
Subjt:  MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQE-----------------------------------------LQSDENGNN

Query:  QPELPEENLNAGVASKGRNLYLEFIFTCCDNLNIYGIVKLRCQKIVPAVLEATFLAKYFL-FIILLRKNGILRENEEEVNGHNLEAAPASNANRSTNKMT
        Q ELPEEN+NAG+    RNLYLEFIFTC +NLN+YGIV+L+C+KIVPAVLEATFLA+Y +  +I+LRKNGILRE EEEVNGHNLEA PASNANRSTNKMT
Subjt:  QPELPEENLNAGVASKGRNLYLEFIFTCCDNLNIYGIVKLRCQKIVPAVLEATFLAKYFL-FIILLRKNGILRENEEEVNGHNLEAAPASNANRSTNKMT

Query:  TRKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLHAFKWKKEIASSSSESKERLRSLRSTNSSA-------------------------------
        TRKRKKEE+S IEEKSIAKVAEIVK+KQKQ+ADRA V+LHAFKWKK+IASSSSESKERL+SLRSTNSSA                               
Subjt:  TRKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLHAFKWKKEIASSSSESKERLRSLRSTNSSA-------------------------------

Query:  -KTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE--------------------------------------------------------
         K+QEFLALGRQTLAELKDKIYCSTD+LM+KA  QDSSGYFL+E                                                        
Subjt:  -KTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE--------------------------------------------------------

Query:  ------------------------------GDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCY
                                      GDCKHTIVIRDMRLIHPEDVHDR AYPIVTFQLRTRA+KCDVCNIYRAKKVTLDDKWAQENPCYFCEDCY
Subjt:  ------------------------------GDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCY

Query:  FLLHYSKEGNLLYNDFVVHDYLQD
        FLLHYSKEGNLLYNDFVVHDYLQD
Subjt:  FLLHYSKEGNLLYNDFVVHDYLQD

TYK29378.1 snRNA-activating protein complex subunit-like isoform X3 [Cucumis melo var. makuwa]7.1e-15560.69Show/hide
Query:  MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQE-----------------------------------------LQSDENGNN
        MEARD AGAS+E+ LNGDGLSIPLGGPIYAPNLVGPLTRVPHFESS++QE                                         LQSDEN NN
Subjt:  MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQE-----------------------------------------LQSDENGNN

Query:  QPELPEENLNAGVASKGRNLYLEFIFTCCDNLNIYGIVKLRCQKIVPAVLEATFLAKYFL-FIILLRKNGILRENEEEVNGHNLEAAPASNANRSTNKMT
        Q ELPEEN+NAG+ SK RNLYLEFIF C +NLN+YGIV+ +C+KIVPAVLEATFLA+  +  +I+LRKNGILRE EEEVNGHNLEA PASNANRSTNKMT
Subjt:  QPELPEENLNAGVASKGRNLYLEFIFTCCDNLNIYGIVKLRCQKIVPAVLEATFLAKYFL-FIILLRKNGILRENEEEVNGHNLEAAPASNANRSTNKMT

Query:  TRKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLHAFKWKKEIASSSSESKERLRSLRSTNSSA-------------------------------
        TRKRKKEE+S IEEKSIAKVAEI K+KQKQ+ADRA V+LHAFKWKK+IASSSSESKERL+SLRSTN+SA                               
Subjt:  TRKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLHAFKWKKEIASSSSESKERLRSLRSTNSSA-------------------------------

Query:  -KTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE--------------------------------------------------------
         K+QEFLALGRQTLAELKDKIYCSTD+LM+KA QQDSSGYFL+E                                                        
Subjt:  -KTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE--------------------------------------------------------

Query:  ------------------------------GDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCY
                                      GDCKHTIVIRDMRLIHPEDVHDR AYPIVTFQLRTRA+KCDVCNIYRAKKVTLDDKWAQENPCYFCEDCY
Subjt:  ------------------------------GDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCY

Query:  FLLHYSKEGNLLYNDFVVHDYLQD
        FLLHYSKEGNLLYNDFVVHDYLQD
Subjt:  FLLHYSKEGNLLYNDFVVHDYLQD

XP_008459093.1 PREDICTED: snRNA-activating protein complex subunit-like isoform X1 [Cucumis melo]3.9e-12954.18Show/hide
Query:  MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQE-----------------------------------------LQSDENGNN
        MEARD AGAS+E+ LNGDGLSIPLGGPIYAPNLVGPLTRVPHFESS++QE                                         LQSDEN NN
Subjt:  MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQE-----------------------------------------LQSDENGNN

Query:  QPELPEENLNAGVASKGRNLYLEFIFTCCDNLNIYGIVKLRCQKIVPAVLEATFLAKYFLFIILLRKNGILRENEEEVNGHNLEAAPASNANRSTNKMTT
        Q ELPEEN+NAG+                                                +ILLRKNGILRE EEEVNGHNLEA PASNANRSTNKMTT
Subjt:  QPELPEENLNAGVASKGRNLYLEFIFTCCDNLNIYGIVKLRCQKIVPAVLEATFLAKYFLFIILLRKNGILRENEEEVNGHNLEAAPASNANRSTNKMTT

Query:  RKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLHAFKWKKEIASSSSESKERLRSLRSTNSSA--------------------------------
        RKRKKEE+S IEEKSIAKVAEI K+KQKQ+ADRA V+LHAFKWKK+IASSSSESKERL+SLRSTN+SA                                
Subjt:  RKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLHAFKWKKEIASSSSESKERLRSLRSTNSSA--------------------------------

Query:  ---KTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE------------------------------------------------------
           K+QEFLALGRQTLAELKDKIYCSTD+LM+KA QQDSSGYFL+E                                                      
Subjt:  ---KTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE------------------------------------------------------

Query:  --------------------------------GDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCED
                                        GDCKHTIVIRDMRLIHPEDVHDR AYPIVTFQLRTRA+KCDVCNIYRAKK TLDDKWAQENPCYFCED
Subjt:  --------------------------------GDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCED

Query:  CYFLLHYSKEGNLLYNDFVVHDYLQD
        CYFLLHYSKEGNLLYNDFVVHDYLQD
Subjt:  CYFLLHYSKEGNLLYNDFVVHDYLQD

XP_008459095.1 PREDICTED: snRNA-activating protein complex subunit-like isoform X3 [Cucumis melo]3.9e-12954.18Show/hide
Query:  MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQE-----------------------------------------LQSDENGNN
        MEARD AGAS+E+ LNGDGLSIPLGGPIYAPNLVGPLTRVPHFESS++QE                                         LQSDEN NN
Subjt:  MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQE-----------------------------------------LQSDENGNN

Query:  QPELPEENLNAGVASKGRNLYLEFIFTCCDNLNIYGIVKLRCQKIVPAVLEATFLAKYFLFIILLRKNGILRENEEEVNGHNLEAAPASNANRSTNKMTT
        Q ELPEEN+NAG+                                                +ILLRKNGILRE EEEVNGHNLEA PASNANRSTNKMTT
Subjt:  QPELPEENLNAGVASKGRNLYLEFIFTCCDNLNIYGIVKLRCQKIVPAVLEATFLAKYFLFIILLRKNGILRENEEEVNGHNLEAAPASNANRSTNKMTT

Query:  RKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLHAFKWKKEIASSSSESKERLRSLRSTNSSA--------------------------------
        RKRKKEE+S IEEKSIAKVAEI K+KQKQ+ADRA V+LHAFKWKK+IASSSSESKERL+SLRSTN+SA                                
Subjt:  RKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLHAFKWKKEIASSSSESKERLRSLRSTNSSA--------------------------------

Query:  ---KTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE------------------------------------------------------
           K+QEFLALGRQTLAELKDKIYCSTD+LM+KA QQDSSGYFL+E                                                      
Subjt:  ---KTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE------------------------------------------------------

Query:  --------------------------------GDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCED
                                        GDCKHTIVIRDMRLIHPEDVHDR AYPIVTFQLRTRA+KCDVCNIYRAKK TLDDKWAQENPCYFCED
Subjt:  --------------------------------GDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCED

Query:  CYFLLHYSKEGNLLYNDFVVHDYLQD
        CYFLLHYSKEGNLLYNDFVVHDYLQD
Subjt:  CYFLLHYSKEGNLLYNDFVVHDYLQD

XP_038894485.1 snRNA-activating protein complex subunit isoform X4 [Benincasa hispida]2.4e-12657.29Show/hide
Query:  MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQELQSDENGNNQPELPEENLNAGVASKGRNLYLEFIFTCCDNLNIYGIVKLR
        MEARDGA ASEE+ALNGDGLSIPLGGPIYAPNLVGPLTRV HFESSLIQELQS E                       L+L+    C D+++I G+    
Subjt:  MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQELQSDENGNNQPELPEENLNAGVASKGRNLYLEFIFTCCDNLNIYGIVKLR

Query:  CQKIVPAVLEATFLAKYFL--FIILLRKN---GILRENEEEVNGHNLEAAPASNANRSTNKMTTRKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAV
         ++++   LE +  +       + L  +N   G++RENEEEVNGHNLEAAPASNA+RS NKMT RKRK+EE SNIEEKS+AKVAEI K+KQKQDADRA V
Subjt:  CQKIVPAVLEATFLAKYFL--FIILLRKN---GILRENEEEVNGHNLEAAPASNANRSTNKMTTRKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAV

Query:  KLHAFKWKKEIASSSSESKERLRSLRSTNSS--------------------------------AKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDS
        KLHAFKWKKEIASSSSESKERL+SLRSTN S                                 KTQE L LG+Q LAELKDKIYCSTD+LMEKAGQQDS
Subjt:  KLHAFKWKKEIASSSSESKERLRSLRSTNSS--------------------------------AKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDS

Query:  SGYFLIE--------------------------------------------------------------------------------------GDCKHTI
        SGYFLIE                                                                                      GDCKHTI
Subjt:  SGYFLIE--------------------------------------------------------------------------------------GDCKHTI

Query:  VIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
        VIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
Subjt:  VIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD

TrEMBL top hitse value%identityAlignment
A0A1S3C9H5 snRNA-activating protein complex subunit-like isoform X11.9e-12954.18Show/hide
Query:  MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQE-----------------------------------------LQSDENGNN
        MEARD AGAS+E+ LNGDGLSIPLGGPIYAPNLVGPLTRVPHFESS++QE                                         LQSDEN NN
Subjt:  MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQE-----------------------------------------LQSDENGNN

Query:  QPELPEENLNAGVASKGRNLYLEFIFTCCDNLNIYGIVKLRCQKIVPAVLEATFLAKYFLFIILLRKNGILRENEEEVNGHNLEAAPASNANRSTNKMTT
        Q ELPEEN+NAG+                                                +ILLRKNGILRE EEEVNGHNLEA PASNANRSTNKMTT
Subjt:  QPELPEENLNAGVASKGRNLYLEFIFTCCDNLNIYGIVKLRCQKIVPAVLEATFLAKYFLFIILLRKNGILRENEEEVNGHNLEAAPASNANRSTNKMTT

Query:  RKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLHAFKWKKEIASSSSESKERLRSLRSTNSSA--------------------------------
        RKRKKEE+S IEEKSIAKVAEI K+KQKQ+ADRA V+LHAFKWKK+IASSSSESKERL+SLRSTN+SA                                
Subjt:  RKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLHAFKWKKEIASSSSESKERLRSLRSTNSSA--------------------------------

Query:  ---KTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE------------------------------------------------------
           K+QEFLALGRQTLAELKDKIYCSTD+LM+KA QQDSSGYFL+E                                                      
Subjt:  ---KTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE------------------------------------------------------

Query:  --------------------------------GDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCED
                                        GDCKHTIVIRDMRLIHPEDVHDR AYPIVTFQLRTRA+KCDVCNIYRAKK TLDDKWAQENPCYFCED
Subjt:  --------------------------------GDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCED

Query:  CYFLLHYSKEGNLLYNDFVVHDYLQD
        CYFLLHYSKEGNLLYNDFVVHDYLQD
Subjt:  CYFLLHYSKEGNLLYNDFVVHDYLQD

A0A1S3CAL2 snRNA-activating protein complex subunit-like isoform X31.9e-12954.18Show/hide
Query:  MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQE-----------------------------------------LQSDENGNN
        MEARD AGAS+E+ LNGDGLSIPLGGPIYAPNLVGPLTRVPHFESS++QE                                         LQSDEN NN
Subjt:  MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQE-----------------------------------------LQSDENGNN

Query:  QPELPEENLNAGVASKGRNLYLEFIFTCCDNLNIYGIVKLRCQKIVPAVLEATFLAKYFLFIILLRKNGILRENEEEVNGHNLEAAPASNANRSTNKMTT
        Q ELPEEN+NAG+                                                +ILLRKNGILRE EEEVNGHNLEA PASNANRSTNKMTT
Subjt:  QPELPEENLNAGVASKGRNLYLEFIFTCCDNLNIYGIVKLRCQKIVPAVLEATFLAKYFLFIILLRKNGILRENEEEVNGHNLEAAPASNANRSTNKMTT

Query:  RKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLHAFKWKKEIASSSSESKERLRSLRSTNSSA--------------------------------
        RKRKKEE+S IEEKSIAKVAEI K+KQKQ+ADRA V+LHAFKWKK+IASSSSESKERL+SLRSTN+SA                                
Subjt:  RKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLHAFKWKKEIASSSSESKERLRSLRSTNSSA--------------------------------

Query:  ---KTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE------------------------------------------------------
           K+QEFLALGRQTLAELKDKIYCSTD+LM+KA QQDSSGYFL+E                                                      
Subjt:  ---KTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE------------------------------------------------------

Query:  --------------------------------GDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCED
                                        GDCKHTIVIRDMRLIHPEDVHDR AYPIVTFQLRTRA+KCDVCNIYRAKK TLDDKWAQENPCYFCED
Subjt:  --------------------------------GDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCED

Query:  CYFLLHYSKEGNLLYNDFVVHDYLQD
        CYFLLHYSKEGNLLYNDFVVHDYLQD
Subjt:  CYFLLHYSKEGNLLYNDFVVHDYLQD

A0A1S4DZX0 snRNA-activating protein complex subunit-like9.1e-12453.04Show/hide
Query:  MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQE-----------------------------------------LQSDENGNN
        MEARD AGASEE+ LNGDGLSIPLGGPIYAPNLVGPLTRVPHFESS++QE                                         LQSD N NN
Subjt:  MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQE-----------------------------------------LQSDENGNN

Query:  QPELPEENLNAGVASKGRNLYLEFIFTCCDNLNIYGIVKLRCQKIVPAVLEATFLAKYFLFIILLRKNGILRENEEEVNGHNLEAAPASNANRSTNKMTT
        Q ELPEEN+NA                                                         G+LRE EEEVNGHNLEA PASNANRSTNKMTT
Subjt:  QPELPEENLNAGVASKGRNLYLEFIFTCCDNLNIYGIVKLRCQKIVPAVLEATFLAKYFLFIILLRKNGILRENEEEVNGHNLEAAPASNANRSTNKMTT

Query:  RKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLHAFKWKKEIASSSSESKERLRSLRSTNSSA--------------------------------
        RKRKKEE+S IEEKSIAKVAEIVK+KQKQ+ADRA V+LHAFKWKK+IASSSSESKERL+SLRSTNSSA                                
Subjt:  RKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLHAFKWKKEIASSSSESKERLRSLRSTNSSA--------------------------------

Query:  ---KTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE------------------------------------------------------
           K+QEFLALGRQTLAELKDKIYCSTD+LM+KA  QDSSGYFL+E                                                      
Subjt:  ---KTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE------------------------------------------------------

Query:  --------------------------------GDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCED
                                        GDCKHTIVIRDMRLIHPEDVHDR AYPIVTFQLRTRA+KCDVCNIYRAKKVTLDDKWAQENPCYFCED
Subjt:  --------------------------------GDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCED

Query:  CYFLLHYSKEGNLLYNDFVVHDYLQD
        CYFLLHYSKEGNLLYNDFVVHDYLQD
Subjt:  CYFLLHYSKEGNLLYNDFVVHDYLQD

A0A5D3D338 snRNA-activating protein complex subunit-like isoform X11.3e-15461.07Show/hide
Query:  MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQE-----------------------------------------LQSDENGNN
        MEARD AGASEE+ LNGDGLSIPLGGPIYAPNLVGPLTRVPHFESS++QE                                         LQSD N NN
Subjt:  MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQE-----------------------------------------LQSDENGNN

Query:  QPELPEENLNAGVASKGRNLYLEFIFTCCDNLNIYGIVKLRCQKIVPAVLEATFLAKYFL-FIILLRKNGILRENEEEVNGHNLEAAPASNANRSTNKMT
        Q ELPEEN+NAG+    RNLYLEFIFTC +NLN+YGIV+L+C+KIVPAVLEATFLA+Y +  +I+LRKNGILRE EEEVNGHNLEA PASNANRSTNKMT
Subjt:  QPELPEENLNAGVASKGRNLYLEFIFTCCDNLNIYGIVKLRCQKIVPAVLEATFLAKYFL-FIILLRKNGILRENEEEVNGHNLEAAPASNANRSTNKMT

Query:  TRKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLHAFKWKKEIASSSSESKERLRSLRSTNSSA-------------------------------
        TRKRKKEE+S IEEKSIAKVAEIVK+KQKQ+ADRA V+LHAFKWKK+IASSSSESKERL+SLRSTNSSA                               
Subjt:  TRKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLHAFKWKKEIASSSSESKERLRSLRSTNSSA-------------------------------

Query:  -KTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE--------------------------------------------------------
         K+QEFLALGRQTLAELKDKIYCSTD+LM+KA  QDSSGYFL+E                                                        
Subjt:  -KTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE--------------------------------------------------------

Query:  ------------------------------GDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCY
                                      GDCKHTIVIRDMRLIHPEDVHDR AYPIVTFQLRTRA+KCDVCNIYRAKKVTLDDKWAQENPCYFCEDCY
Subjt:  ------------------------------GDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCY

Query:  FLLHYSKEGNLLYNDFVVHDYLQD
        FLLHYSKEGNLLYNDFVVHDYLQD
Subjt:  FLLHYSKEGNLLYNDFVVHDYLQD

A0A5D3E0W6 snRNA-activating protein complex subunit-like isoform X33.4e-15560.69Show/hide
Query:  MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQE-----------------------------------------LQSDENGNN
        MEARD AGAS+E+ LNGDGLSIPLGGPIYAPNLVGPLTRVPHFESS++QE                                         LQSDEN NN
Subjt:  MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQE-----------------------------------------LQSDENGNN

Query:  QPELPEENLNAGVASKGRNLYLEFIFTCCDNLNIYGIVKLRCQKIVPAVLEATFLAKYFL-FIILLRKNGILRENEEEVNGHNLEAAPASNANRSTNKMT
        Q ELPEEN+NAG+ SK RNLYLEFIF C +NLN+YGIV+ +C+KIVPAVLEATFLA+  +  +I+LRKNGILRE EEEVNGHNLEA PASNANRSTNKMT
Subjt:  QPELPEENLNAGVASKGRNLYLEFIFTCCDNLNIYGIVKLRCQKIVPAVLEATFLAKYFL-FIILLRKNGILRENEEEVNGHNLEAAPASNANRSTNKMT

Query:  TRKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLHAFKWKKEIASSSSESKERLRSLRSTNSSA-------------------------------
        TRKRKKEE+S IEEKSIAKVAEI K+KQKQ+ADRA V+LHAFKWKK+IASSSSESKERL+SLRSTN+SA                               
Subjt:  TRKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLHAFKWKKEIASSSSESKERLRSLRSTNSSA-------------------------------

Query:  -KTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE--------------------------------------------------------
         K+QEFLALGRQTLAELKDKIYCSTD+LM+KA QQDSSGYFL+E                                                        
Subjt:  -KTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE--------------------------------------------------------

Query:  ------------------------------GDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCY
                                      GDCKHTIVIRDMRLIHPEDVHDR AYPIVTFQLRTRA+KCDVCNIYRAKKVTLDDKWAQENPCYFCEDCY
Subjt:  ------------------------------GDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCY

Query:  FLLHYSKEGNLLYNDFVVHDYLQD
        FLLHYSKEGNLLYNDFVVHDYLQD
Subjt:  FLLHYSKEGNLLYNDFVVHDYLQD

SwissProt top hitse value%identityAlignment
Q4R6Y6 snRNA-activating protein complex subunit 35.9e-1945.16Show/hide
Query:  EGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL
        +GDC+H IVI D+RL+H +D  DR  YP++  +     RKC VC +Y A+ VT +D +A E+PC+FC+ C+ +LHY  EGN L  +F+ + Y+
Subjt:  EGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL

Q5BK68 snRNA-activating protein complex subunit 32.0e-1945.16Show/hide
Query:  EGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL
        +GDC+H +VI D+RL+H +D  DR  YP++T +     RKC VC +Y A+ VT +D +A E+PC+FC+ C+ +LHY  EGN L  +F+ + Y+
Subjt:  EGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL

Q8L627 snRNA-activating protein complex subunit2.9e-3432.23Show/hide
Query:  EAAPASNANRSTNKMTTRKRKKEEISNIEEKS--------------------IAKVAEIVKIKQKQDADRAAVKLHAFKWKKEIAS---SSSESKERLRS
        E  P+ N +   N +  R ++K  + N E K                     + KV ++ K+KQKQ+ D+AAV LH F    E      +  E  E+++S
Subjt:  EAAPASNANRSTNKMTTRKRKKEEISNIEEKS--------------------IAKVAEIVKIKQKQDADRAAVKLHAFKWKKEIAS---SSSESKERLRS

Query:  LRSTNSS-------------------------------AKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE------------------
        LR  +++                                KTQEFL LGRQ L ELKD I+C+TD +M+KAG+ D SGYFLIE                  
Subjt:  LRSTNSS-------------------------------AKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE------------------

Query:  ---------------------------------------------------------------------GDCKHTIVIRDMRLIHPEDVHDRVAYPIVTF
                                                                             GDCKHTIVIRDMR+ HPEDV +R AYPI+ F
Subjt:  ---------------------------------------------------------------------GDCKHTIVIRDMRLIHPEDVHDRVAYPIVTF

Query:  QLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
          + R +KC VC I RA KV +DDKWA EN  YFC+ C+ LLH S+EG  L  DF V DY+ +
Subjt:  QLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD

Q92966 snRNA-activating protein complex subunit 35.9e-1945.16Show/hide
Query:  EGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL
        +GDC+H IVI D+RL+H +D  DR  YP++  +     RKC VC +Y A+ VT +D +A E+PC+FC+ C+ +LHY  EGN L  +F+ + Y+
Subjt:  EGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL

Q9D2C9 snRNA-activating protein complex subunit 32.0e-1945.16Show/hide
Query:  EGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL
        +GDC+H +VI D+RL+H +D  DR  YP++T +     RKC VC +Y A+ VT +D +A E+PC+FC+ C+ +LHY  EGN L  +F+ + Y+
Subjt:  EGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL

Arabidopsis top hitse value%identityAlignment
AT1G28560.1 snRNA activating complex family protein2.1e-3532.23Show/hide
Query:  EAAPASNANRSTNKMTTRKRKKEEISNIEEKS--------------------IAKVAEIVKIKQKQDADRAAVKLHAFKWKKEIAS---SSSESKERLRS
        E  P+ N +   N +  R ++K  + N E K                     + KV ++ K+KQKQ+ D+AAV LH F    E      +  E  E+++S
Subjt:  EAAPASNANRSTNKMTTRKRKKEEISNIEEKS--------------------IAKVAEIVKIKQKQDADRAAVKLHAFKWKKEIAS---SSSESKERLRS

Query:  LRSTNSS-------------------------------AKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE------------------
        LR  +++                                KTQEFL LGRQ L ELKD I+C+TD +M+KAG+ D SGYFLIE                  
Subjt:  LRSTNSS-------------------------------AKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE------------------

Query:  ---------------------------------------------------------------------GDCKHTIVIRDMRLIHPEDVHDRVAYPIVTF
                                                                             GDCKHTIVIRDMR+ HPEDV +R AYPI+ F
Subjt:  ---------------------------------------------------------------------GDCKHTIVIRDMRLIHPEDVHDRVAYPIVTF

Query:  QLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
          + R +KC VC I RA KV +DDKWA EN  YFC+ C+ LLH S+EG  L  DF V DY+ +
Subjt:  QLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD

AT1G28560.2 snRNA activating complex family protein9.3e-3633.91Show/hide
Query:  NLEAAPASNANRSTNKMTTRKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLHAFKWKKEIAS---SSSESKERLRSLRSTNSS-----------
        N E    +  N    KMT +K         EE  + KV ++ K+KQKQ+ D+AAV LH F    E      +  E  E+++SLR  +++           
Subjt:  NLEAAPASNANRSTNKMTTRKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLHAFKWKKEIAS---SSSESKERLRSLRSTNSS-----------

Query:  --------------------AKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE------------------------------------
                             KTQEFL LGRQ L ELKD I+C+TD +M+KAG+ D SGYFLIE                                    
Subjt:  --------------------AKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE------------------------------------

Query:  ---------------------------------------------------GDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAK
                                                           GDCKHTIVIRDMR+ HPEDV +R AYPI+ F  + R +KC VC I RA 
Subjt:  ---------------------------------------------------GDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAK

Query:  KVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD
        KV +DDKWA EN  YFC+ C+ LLH S+EG  L  DF V DY+ +
Subjt:  KVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCGAGAGACGGGGCTGGAGCTTCAGAGGAGCTGGCTCTTAATGGAGATGGCCTCTCAATTCCTTTGGGTGGACCAATATATGCACCTAACTTGGTTGGTCCTCT
CACCAGGGTCCCTCACTTTGAGTCTTCTCTAATTCAAGAACTTCAGAGTGATGAGAATGGTAATAACCAGCCAGAACTTCCAGAAGAAAATTTGAATGCTGGGGTGGCAA
GCAAAGGAAGGAACCTCTATTTAGAATTCATCTTTACTTGCTGTGACAACCTCAACATCTATGGTATTGTGAAGCTAAGATGTCAGAAGATAGTTCCTGCGGTTCTAGAA
GCAACCTTCCTTGCAAAGTACTTTTTGTTCATAATTCTTTTGAGGAAAAATGGTATTCTTAGAGAAAATGAGGAGGAAGTTAACGGGCACAATTTGGAGGCTGCTCCTGC
ATCAAATGCAAATAGAAGCACGAATAAAATGACTACAAGGAAGCGAAAAAAGGAGGAAATTTCTAATATTGAGGAAAAGTCTATTGCAAAGGTGGCTGAAATTGTAAAGA
TTAAACAAAAGCAGGATGCAGACAGAGCTGCAGTGAAATTACATGCTTTCAAGTGGAAGAAGGAAATTGCCAGTTCATCGTCAGAAAGCAAAGAGAGGTTGAGATCCTTG
AGGTCTACAAATTCTTCTGCAAAGACTCAAGAGTTTTTGGCCCTTGGACGACAAACGTTAGCAGAACTGAAGGACAAGATTTATTGCTCGACAGATTCGTTAATGGAAAA
GGCTGGGCAGCAAGATTCGTCTGGATATTTCCTTATAGAAGGAGATTGCAAGCATACCATAGTGATTAGAGATATGAGGTTGATCCATCCTGAGGACGTACATGATCGTG
TTGCTTATCCAATCGTTACATTTCAGCTTAGGACCCGAGCTCGGAAATGTGATGTCTGTAACATTTACAGGGCTAAGAAGGTTACTCTTGACGATAAGTGGGCACAGGAA
AACCCGTGCTACTTTTGTGAAGACTGCTATTTTCTTCTTCACTACTCGAAAGAAGGGAACCTCCTTTACAATGATTTCGTGGTGCACGATTACTTGCAAGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCGAGAGACGGGGCTGGAGCTTCAGAGGAGCTGGCTCTTAATGGAGATGGCCTCTCAATTCCTTTGGGTGGACCAATATATGCACCTAACTTGGTTGGTCCTCT
CACCAGGGTCCCTCACTTTGAGTCTTCTCTAATTCAAGAACTTCAGAGTGATGAGAATGGTAATAACCAGCCAGAACTTCCAGAAGAAAATTTGAATGCTGGGGTGGCAA
GCAAAGGAAGGAACCTCTATTTAGAATTCATCTTTACTTGCTGTGACAACCTCAACATCTATGGTATTGTGAAGCTAAGATGTCAGAAGATAGTTCCTGCGGTTCTAGAA
GCAACCTTCCTTGCAAAGTACTTTTTGTTCATAATTCTTTTGAGGAAAAATGGTATTCTTAGAGAAAATGAGGAGGAAGTTAACGGGCACAATTTGGAGGCTGCTCCTGC
ATCAAATGCAAATAGAAGCACGAATAAAATGACTACAAGGAAGCGAAAAAAGGAGGAAATTTCTAATATTGAGGAAAAGTCTATTGCAAAGGTGGCTGAAATTGTAAAGA
TTAAACAAAAGCAGGATGCAGACAGAGCTGCAGTGAAATTACATGCTTTCAAGTGGAAGAAGGAAATTGCCAGTTCATCGTCAGAAAGCAAAGAGAGGTTGAGATCCTTG
AGGTCTACAAATTCTTCTGCAAAGACTCAAGAGTTTTTGGCCCTTGGACGACAAACGTTAGCAGAACTGAAGGACAAGATTTATTGCTCGACAGATTCGTTAATGGAAAA
GGCTGGGCAGCAAGATTCGTCTGGATATTTCCTTATAGAAGGAGATTGCAAGCATACCATAGTGATTAGAGATATGAGGTTGATCCATCCTGAGGACGTACATGATCGTG
TTGCTTATCCAATCGTTACATTTCAGCTTAGGACCCGAGCTCGGAAATGTGATGTCTGTAACATTTACAGGGCTAAGAAGGTTACTCTTGACGATAAGTGGGCACAGGAA
AACCCGTGCTACTTTTGTGAAGACTGCTATTTTCTTCTTCACTACTCGAAAGAAGGGAACCTCCTTTACAATGATTTCGTGGTGCACGATTACTTGCAAGATTAG
Protein sequenceShow/hide protein sequence
MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQELQSDENGNNQPELPEENLNAGVASKGRNLYLEFIFTCCDNLNIYGIVKLRCQKIVPAVLE
ATFLAKYFLFIILLRKNGILRENEEEVNGHNLEAAPASNANRSTNKMTTRKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLHAFKWKKEIASSSSESKERLRSL
RSTNSSAKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIEGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQE
NPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD