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HG10021521 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021521
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionnon-specific lipid-transfer protein 2-like
Genome locationChr05:10588659..10588943
RNA-Seq ExpressionHG10021521
SyntenyHG10021521
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR033872 - Non-specific lipid-transfer protein type 2
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648143.1 hypothetical protein Csa_023893, partial [Cucumis sativus]1.9e-1953.01Show/hide
Query:  VVMMVIVNEMQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC
        +++ V V E Q A A  C+PNE+R C+ A+TTS  PSS+CC+ V++HR CYC YKK P  Q YLQ   TK+II+QCG+ +P+C
Subjt:  VVMMVIVNEMQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC

KAE8648147.1 hypothetical protein Csa_023900, partial [Cucumis sativus]1.6e-1857.53Show/hide
Query:  QSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC
        Q A A  C+PNE+R C+ A+TTS  PSS+CC+ V++HR CYC YKK P  Q YLQ   TK+IISQCG+ +P+C
Subjt:  QSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC

KGN66906.1 hypothetical protein Csa_006987 [Cucumis sativus]3.6e-2665.93Show/hide
Query:  MKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC
        M+G+ LL+VV    +NE Q ++AVKC+P ELRPC L+FT S+EPSS CC KV +HR CYC Y K PK QPYL+YDAT+RIIS CGVAIPTC
Subjt:  MKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC

XP_022759945.1 non-specific lipid-transfer protein 2-like [Durio zibethinus]1.0e-1746.24Show/hide
Query:  FSMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC
        FS    C   +V+++   E ++AEAV C+P++L PCL A T+S  PS+TCC+K+KE +PC+CGY K P I+ ++    +KR+ S CGVA P C
Subjt:  FSMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC

XP_022759947.1 non-specific lipid-transfer protein 2-like [Durio zibethinus]3.0e-1745.16Show/hide
Query:  FSMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC
        FS    C   +V+++   E ++ EAV C+P++L PCL A T+S  PS+TCC+K+KE +PC+CGY K P I+ ++    +KR+ S CGVA P C
Subjt:  FSMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC

TrEMBL top hitse value%identityAlignment
A0A0A0M3W7 AAI domain-containing protein1.7e-2665.93Show/hide
Query:  MKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC
        M+G+ LL+VV    +NE Q ++AVKC+P ELRPC L+FT S+EPSS CC KV +HR CYC Y K PK QPYL+YDAT+RIIS CGVAIPTC
Subjt:  MKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC

A0A2Z6NR57 AAI domain-containing protein4.3e-1746.81Show/hide
Query:  MFSMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC
        M  MK +C ++++++++V      EAV C P ELRPCL A T++  PS+ CCNK+KE  PC CGY K P + PY+     KR+ S CGVA P C
Subjt:  MFSMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC

A0A6P6A579 non-specific lipid-transfer protein 2-like1.5e-1745.16Show/hide
Query:  FSMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC
        FS    C   +V+++   E ++ EAV C+P++L PCL A T+S  PS+TCC+K+KE +PC+CGY K P I+ ++    +KR+ S CGVA P C
Subjt:  FSMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC

A0A6P6A5B6 non-specific lipid-transfer protein 2-like5.1e-1846.24Show/hide
Query:  FSMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC
        FS    C   +V+++   E ++AEAV C+P++L PCL A T+S  PS+TCC+K+KE +PC+CGY K P I+ ++    +KR+ S CGVA P C
Subjt:  FSMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC

I1N5L5 AAI domain-containing protein4.3e-1748.45Show/hide
Query:  MFSMKGMCLLLVVMMV---IVNEMQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC
        M  MK +C   +V+M    +V     AEAV C P EL PCL A T+S  PS+TCC KV+E RPC CGY K P ++PY+    ++R+ S CGV  PTC
Subjt:  MFSMKGMCLLLVVMMV---IVNEMQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC

SwissProt top hitse value%identityAlignment
A2XBN5 Non-specific lipid-transfer protein 28.6e-0727.27Show/hide
Query:  LLLVVMMVIV--NEMQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC
        L+L V MV      +       C   +L  C  A      P++ CC+ ++  + C+C + K P+   Y+     ++ +S CG+A+PTC
Subjt:  LLLVVMMVIV--NEMQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC

P82353 Non-specific lipid-transfer protein 28.9e-1239.71Show/hide
Query:  VKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC
        V C P +L PCL    +     +TCC K++E RPC CGY K P ++ Y+     +++ S CGV +P C
Subjt:  VKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC

P86809 Non-specific lipid-transfer protein 25.2e-1244.44Show/hide
Query:  CEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAI
        C   +L PCL A T +  PS+ CCNK+KE +PC CGY K P ++ Y+     ++  S CGVA+
Subjt:  CEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAI

Q10ST8 Non-specific lipid-transfer protein 21.5e-0627.27Show/hide
Query:  LLLVVMMVIV--NEMQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC
        L+L V MV      +       C   +L  C  A      P++ CC+ ++  + C+C + K P+   Y+     ++ +S CG+A+PTC
Subjt:  LLLVVMMVIV--NEMQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC

Q43681 Probable non-specific lipid-transfer protein AKCS97.8e-1640.66Show/hide
Query:  MKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC
        M  +C ++VV + +++    AEAV C P EL  C+ A T   +PSSTCC+K+K   PC C Y K P ++ Y+     K+++S CGV  P C
Subjt:  MKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC

Arabidopsis top hitse value%identityAlignment
AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein5.4e-1229.79Show/hide
Query:  MFSMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC
        M  +  + +L +   +++  +  AE V C P +L  C  A T+S  PS  CC K++E +PC CGY + P ++ Y+     +++ + C +  P+C
Subjt:  MFSMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC

AT1G66850.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.2e-1132.35Show/hide
Query:  MKGMCLLLVVMMVIVNEMQSA-----------EAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIP
        MK + L+LVV +++     +A             V C+  +L+PCL A T   +PS  CC K+ E + C CG+ K P    Y+     ++++  C VA P
Subjt:  MKGMCLLLVVMMVIVNEMQSA-----------EAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIP

Query:  TC
        TC
Subjt:  TC

AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein7.5e-1436.96Show/hide
Query:  SMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC
        +M  +  L  V+++I+    +AEAV C P +L PC  A T+S  PS+ CC K+KE RPC CGY + P ++ ++     +++   C + IP C
Subjt:  SMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC

AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.0e-1139.71Show/hide
Query:  VKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC
        V C+  +L  C     T V PS+ CC K+KE +PC+C Y K P+   Y+     K+ ++ CGV  PTC
Subjt:  VKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC

AT5G38195.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.7e-1130.53Show/hide
Query:  MKGMCLLLVVMMVIVNE----MQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC
        MK M L+++ ++++V      ++S  +  C P EL PCL A TT  +P+  CC+K+ E + C CGY   P    ++     ++++  C +  P+C
Subjt:  MKGMCLLLVVMMVIVNE----MQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTCAATGAAAGGCATGTGCCTTTTGTTGGTCGTGATGATGGTGATTGTCAATGAAATGCAATCGGCGGAGGCAGTGAAATGCGAGCCAAATGAATTGAGACCATG
TCTTTTGGCGTTCACAACGTCGGTGGAGCCATCTTCAACTTGTTGCAATAAAGTGAAGGAACACAGACCATGCTATTGTGGATACAAGAAATATCCAAAGATTCAACCCT
ATTTACAATATGATGCAACCAAAAGAATCATTTCTCAATGCGGAGTTGCCATCCCGACTTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTCAATGAAAGGCATGTGCCTTTTGTTGGTCGTGATGATGGTGATTGTCAATGAAATGCAATCGGCGGAGGCAGTGAAATGCGAGCCAAATGAATTGAGACCATG
TCTTTTGGCGTTCACAACGTCGGTGGAGCCATCTTCAACTTGTTGCAATAAAGTGAAGGAACACAGACCATGCTATTGTGGATACAAGAAATATCCAAAGATTCAACCCT
ATTTACAATATGATGCAACCAAAAGAATCATTTCTCAATGCGGAGTTGCCATCCCGACTTGCTAA
Protein sequenceShow/hide protein sequence
MFSMKGMCLLLVVMMVIVNEMQSAEAVKCEPNELRPCLLAFTTSVEPSSTCCNKVKEHRPCYCGYKKYPKIQPYLQYDATKRIISQCGVAIPTC