| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_018829461.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Juglans regia] | 3.6e-95 | 86.41 | Show/hide |
Query: MVLSEEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENVFRAIL
M LSEEEITRLFR+R+TV+QMLKDRGYFVGDFE+DM++ QFK+K+GESMKREDLVINKS RNNSSDQIYIFFPEEPKVG+KT+ TY +RMKSENVFRAIL
Subjt: MVLSEEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENVFRAIL
Query: VVQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFAR+SI EIS+K HLEVFQEAEL++NIK HVL+PEH LTNEEKKTLLERYTVKETQLPRIQV+DP+ARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_022953770.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita moschata] | 3.6e-95 | 86.89 | Show/hide |
Query: MVLSEEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENVFRAIL
MVLSEEEITRLFR+RKTVLQMLKDRGYFVGDFE+DMSR QFKHK+GESMKRED+VINK+ RN+SSDQIY+FFPEE KVG+KT+ TY RMK+ENVFRAIL
Subjt: MVLSEEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENVFRAIL
Query: VVQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFART I EISSK HLEVFQEAEL+VN+K+HVL+PEH LTNEEKKTLLERYTVKETQLPRIQV+DP+ARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_022955185.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita moschata] | 8.0e-95 | 86.41 | Show/hide |
Query: MVLSEEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENVFRAIL
MVLSEEEITRLFR+RKT++QMLKDRGY+VGD ++DMSR QF++K+G++MKREDLVINK+MRNNSSDQIYIFFPEEPKVG+KT+ TY RMKSENVFRAIL
Subjt: MVLSEEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENVFRAIL
Query: VVQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFART I EISSK HLEVFQEAELMVN+K+HVLIPEH LTNEEKKTLLERYTVKETQLPRIQV+DPIARYYGLKRGQV+KIIRPSETAGRYV
Subjt: VVQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_022959553.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita moschata] | 8.0e-95 | 87.38 | Show/hide |
Query: MVLSEEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENVFRAIL
MVL+EEEITRLFRVRKTVLQMLKDRGYFVGDFE+DMSR QFK+K+GESMKRED+VINK+ RN+SSDQIYIFFPEEPKVG+KT+ TY RMKSENVFRAIL
Subjt: MVLSEEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENVFRAIL
Query: VVQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFART I EIS+K HLEVFQEAEL+VNIK+HVL+PEH L+NEEKKTLLERYTVKETQLPRIQV+DP+ARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_022991826.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita maxima] | 2.7e-95 | 86.89 | Show/hide |
Query: MVLSEEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENVFRAIL
MVLSEEEITRLFR+RKTVLQMLKDRGYFVGDFE+DMSR QFKHK+GESMKRED+VINK+ RN+SSDQIY+FFPEE KVG+KT+ TY RMK+ENVFRAIL
Subjt: MVLSEEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENVFRAIL
Query: VVQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFART I EISSK HLEVFQEAEL+VN+K+HVL+PEH LTNEEKKTLLERYTVKETQLPRIQV+DP+ARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2I4FCU5 DNA-directed RNA polymerases II and IV subunit 5A-like | 1.7e-95 | 86.41 | Show/hide |
Query: MVLSEEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENVFRAIL
M LSEEEITRLFR+R+TV+QMLKDRGYFVGDFE+DM++ QFK+K+GESMKREDLVINKS RNNSSDQIYIFFPEEPKVG+KT+ TY +RMKSENVFRAIL
Subjt: MVLSEEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENVFRAIL
Query: VVQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFAR+SI EIS+K HLEVFQEAEL++NIK HVL+PEH LTNEEKKTLLERYTVKETQLPRIQV+DP+ARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| A0A6J1GQK9 DNA-directed RNA polymerases II and IV subunit 5A-like | 1.7e-95 | 86.89 | Show/hide |
Query: MVLSEEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENVFRAIL
MVLSEEEITRLFR+RKTVLQMLKDRGYFVGDFE+DMSR QFKHK+GESMKRED+VINK+ RN+SSDQIY+FFPEE KVG+KT+ TY RMK+ENVFRAIL
Subjt: MVLSEEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENVFRAIL
Query: VVQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFART I EISSK HLEVFQEAEL+VN+K+HVL+PEH LTNEEKKTLLERYTVKETQLPRIQV+DP+ARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| A0A6J1H699 DNA-directed RNA polymerases II and IV subunit 5A-like | 3.9e-95 | 87.38 | Show/hide |
Query: MVLSEEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENVFRAIL
MVL+EEEITRLFRVRKTVLQMLKDRGYFVGDFE+DMSR QFK+K+GESMKRED+VINK+ RN+SSDQIYIFFPEEPKVG+KT+ TY RMKSENVFRAIL
Subjt: MVLSEEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENVFRAIL
Query: VVQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFART I EIS+K HLEVFQEAEL+VNIK+HVL+PEH L+NEEKKTLLERYTVKETQLPRIQV+DP+ARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| A0A6J1JRV4 DNA-directed RNA polymerases II and IV subunit 5A-like | 1.3e-95 | 86.89 | Show/hide |
Query: MVLSEEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENVFRAIL
MVLSEEEITRLFR+RKTVLQMLKDRGYFVGDFE+DMSR QFKHK+GESMKRED+VINK+ RN+SSDQIY+FFPEE KVG+KT+ TY RMK+ENVFRAIL
Subjt: MVLSEEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENVFRAIL
Query: VVQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFART I EISSK HLEVFQEAEL+VN+K+HVL+PEH LTNEEKKTLLERYTVKETQLPRIQV+DP+ARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| A0A6J1KT45 DNA-directed RNA polymerases II and IV subunit 5A-like | 3.9e-95 | 87.38 | Show/hide |
Query: MVLSEEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENVFRAIL
MVL+EEEITRLFRVRKTVLQMLKDRGYFVGDFE+DMSR QFK+K+GESMKRED+VINK+ RN+SSDQIYIFFPEEPKVG+KT+ TY RMKSENVFRAIL
Subjt: MVLSEEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENVFRAIL
Query: VVQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFART I EIS+K HLEVFQEAEL+VNIK+HVL+PEH L+NEEKKTLLERYTVKETQLPRIQV+DP+ARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| A8XGH1 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 4.4e-56 | 54.98 | Show/hide |
Query: MVLSEEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGE-----SMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENV
M E E RL+R+RKTVLQM+ DRGY V ELD FK FG+ R DL I + ++ +DQ+++FFPE+ K+GIKT+ ++M+ +N+
Subjt: MVLSEEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGE-----SMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENV
Query: FRAILVVQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSET
RAI+VVQ +TP A+ SIG+++ K LE F EAELMVNI H L+PEHV +T EEK LL RY +K++QLPRIQ DP+ARY+GL+RGQVVKIIRPSET
Subjt: FRAILVVQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSET
Query: AGRYVTYRYVV
AGRY+TYR VV
Subjt: AGRYVTYRYVV
|
|
| B0BNE2 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 1.2e-56 | 52.91 | Show/hide |
Query: EEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGES-----MKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENVFRAI
EEE RL+++RKT++Q+ DRGY V ELD + +FK +FG+ +R DL + + ++ +DQ+++FFPEEPKVGIKT+ Y +RM+ EN+ RA+
Subjt: EEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGES-----MKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENVFRAI
Query: LVVQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRY
+VVQQ +TP A+ S+ +++ K LE F + EL++NI H L+PEHV +T EE LL RY ++E+QLPRIQ DP+ARY+G+KRGQVVKIIRPSETAGRY
Subjt: LVVQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| O81098 DNA-directed RNA polymerases II and IV subunit 5A | 2.3e-84 | 76.1 | Show/hide |
Query: VLSEEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENVFRAILV
+L+EEE+ RL+R++KT++QML+DRGYF+ D EL M++ QF K G++MKREDLV K+ RN++SDQ+YIFFP+E KVG+KT+ Y RMKSENVFRAILV
Subjt: VLSEEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENVFRAILV
Query: VQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYVT
VQQNLTPFART I EISSK HLEVFQEAE++VNIK HVL+PEH LT EEKKTLLERYTVKETQLPRIQV+DPIARY+GLKRGQVVKIIRPSETAGRYVT
Subjt: VQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| Q5R587 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 3.4e-56 | 52.43 | Show/hide |
Query: EEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGES-----MKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENVFRAI
EEE RL+++RKT++Q+ DRGY V ELD + +F+ +FG+ +R DL + + ++ +DQ+++FFPEEPKVGIKT+ Y +RM+ EN+ RA+
Subjt: EEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGES-----MKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENVFRAI
Query: LVVQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRY
+VVQQ +TP A+ S+ +++ K LE F + EL++NI H L+PEHV +T EE LL RY ++E QLPRIQ DP+ARY+G+KRGQVVKIIRPSETAGRY
Subjt: LVVQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| Q80UW8 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 1.2e-56 | 52.91 | Show/hide |
Query: EEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGES-----MKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENVFRAI
EEE RL+++RKT++Q+ DRGY V ELD + +FK +FG+ +R DL + + ++ +DQ+++FFPEEPKVGIKT+ Y +RM+ EN+ RA+
Subjt: EEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGES-----MKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENVFRAI
Query: LVVQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRY
+VVQQ +TP A+ S+ +++ K LE F + EL++NI H L+PEHV +T EE LL RY ++E+QLPRIQ DP+ARY+G+KRGQVVKIIRPSETAGRY
Subjt: LVVQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G41340.1 RNA polymerase II fifth largest subunit, D | 2.8e-29 | 36.95 | Show/hide |
Query: SEEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKS-ENVFRAILVV
S E + + R+T ++ML+DRGY V D ++++S QF+ +GE + L I+ R +SS +I + F V + + + S EN+ ILV+
Subjt: SEEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKS-ENVFRAILVV
Query: QQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYVTY
Q ++T A ++ S KV E+F+ +L+VN+ HVL P+H L ++EK++LL++++++E QLPR+ DPI RYYGL+ GQV+K+ E + +VTY
Subjt: QQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYVTY
Query: RYV
R V
Subjt: RYV
|
|
| AT3G22320.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 1.6e-85 | 76.1 | Show/hide |
Query: VLSEEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENVFRAILV
+L+EEE+ RL+R++KT++QML+DRGYF+ D EL M++ QF K G++MKREDLV K+ RN++SDQ+YIFFP+E KVG+KT+ Y RMKSENVFRAILV
Subjt: VLSEEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSENVFRAILV
Query: VQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYVT
VQQNLTPFART I EISSK HLEVFQEAE++VNIK HVL+PEH LT EEKKTLLERYTVKETQLPRIQV+DPIARY+GLKRGQVVKIIRPSETAGRYVT
Subjt: VQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| AT3G54490.1 RNA polymerase II fifth largest subunit, E | 1.2e-24 | 33.33 | Show/hide |
Query: EITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSE-NVFRAILVVQQN
E R + R T +ML+DRGY V + EL ++ +F+ FGE + E L I +R++ +I + F + +K++ ++ + + ILV+Q
Subjt: EITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTLDTYKKRMKSE-NVFRAILVVQQN
Query: LTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYV
+ FA+ ++ V E F +L+VNI H+ P+ L EEK+ LL ++ +++ QLP +Q D RYYGLK+ QVVKI E G +VTYR +
Subjt: LTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYV
Query: V
+
Subjt: V
|
|
| AT3G57080.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 1.4e-28 | 38.24 | Show/hide |
Query: LSEEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTL-DTYKKRMKSENVFRAILV
LS EE R + R+ LQML+DRGY V D ++++S F+ +GE + L I+ R++S+ ++ I F V + + + E + ILV
Subjt: LSEEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESMKREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTL-DTYKKRMKSENVFRAILV
Query: VQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYVT
+Q ++T A +I S KV E+FQ +L+VNI H L P+H L +EEK TLL++++++E QLPRI D I RYYGL++GQVVK+ E +V
Subjt: VQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYV
+R V
Subjt: YRYV
|
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| AT5G57980.1 RNA polymerase II fifth largest subunit, C | 1.6e-45 | 45.63 | Show/hide |
Query: EEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESM---KREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTL-DTYKKRMKSENVFRAIL
++EITR+F+VR+TVLQML+DRGY + + +L++ R +F +F ++M +E L ++ + N +D+IY+F+PE PKVG+ + +M+ + V R I+
Subjt: EEEITRLFRVRKTVLQMLKDRGYFVGDFELDMSRGQFKHKFGESM---KREDLVINKSMRNNSSDQIYIFFPEEPKVGIKTL-DTYKKRMKSENVFRAIL
Query: VVQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYV
VV +T AR ++ E++ + +EVF+EAEL+ NI H L+ ++ L ++ KK LL YTV++TQLPRI V+DP+ARYYGLKRGQVVKI R T+ Y
Subjt: VVQQNLTPFARTSIGEISSKVHLEVFQEAELMVNIKNHVLIPEHVSLTNEEKKTLLERYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYR+ V
Subjt: TYRYVV
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