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HG10021559 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021559
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProtein Ycf2-like
Genome locationChr05:11422367..11422949
RNA-Seq ExpressionHG10021559
SyntenyHG10021559
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033753.1 protein Ycf2-like [Cucumis melo var. makuwa]5.5e-0930.18Show/hide
Query:  MNMPYFAPFLENEKRVMKEVEEELNKYMSKERVVGLSLNKGL--AYGNDVRFECMEKIQESMKK---TMEEKFEEINIGREILTKKIDDLVEILKIMIDY
        + MPYFAPF+E EK ++KE E+EL K  + + +  +SLN+G+    G DV  + +EKI+ S K+   ++E   E +      +  + ++L + +  +I+ 
Subjt:  MNMPYFAPFLENEKRVMKEVEEELNKYMSKERVVGLSLNKGL--AYGNDVRFECMEKIQESMKK---TMEEKFEEINIGREILTKKIDDLVEILKIMIDY

Query:  MKNTSVGAARVSTSNLYMAASEFEQELDEIEKEQEEKEEEKEFVDGSDHPTTIRINDDNQDDEGQGKKD
        +K+    ++    ++ +M A  FE+ L+++E++QEE ++ K     S +PT +   DD++D + +G  D
Subjt:  MKNTSVGAARVSTSNLYMAASEFEQELDEIEKEQEEKEEEKEFVDGSDHPTTIRINDDNQDDEGQGKKD

KAA0035989.1 protein Ycf2-like [Cucumis melo var. makuwa]3.8e-1030.81Show/hide
Query:  MNMPYFAPFLENEKRVMKEVEEELNKYMSKERVVGLSLNKGL--AYGNDVRFECMEKIQESMKK---TMEEKFEEINIGREILTKKIDDLVEILKIMIDY
        + MPYFAPF+E EK ++KE E+EL K  + + +  +SLN+G+    G DV  + ++KI+ S K+   ++E   E +      L  + ++L + +  +I+ 
Subjt:  MNMPYFAPFLENEKRVMKEVEEELNKYMSKERVVGLSLNKGL--AYGNDVRFECMEKIQESMKK---TMEEKFEEINIGREILTKKIDDLVEILKIMIDY

Query:  MKNTSVGAARVSTSNLYMAASEFEQELDEIEKEQEEKEEEKEFVDGSDHPTTIRINDDNQDDEGQGKKDPQS
        +++    ++    ++ +M A  FE+ LD++E +QEE + E   +D S +PT +   DD++D  G+G  D ++
Subjt:  MKNTSVGAARVSTSNLYMAASEFEQELDEIEKEQEEKEEEKEFVDGSDHPTTIRINDDNQDDEGQGKKDPQS

TYK19697.1 protein Ycf2-like [Cucumis melo var. makuwa]7.9e-0827.88Show/hide
Query:  MNMPYFAPFLENEKRVMKEVEEELNKYMSKERVVGLSLNKGLAYGNDVR-----FECMEKIQESMKKTMEEKFEEINIGREILTKKIDDLVEILKIMIDY
        + MPYFAPF+E EK ++KE E+EL K  + + +  +SLN+G+   + +       E  E  Q+ M+ ++E   E +      +  +  +L + +  +I+ 
Subjt:  MNMPYFAPFLENEKRVMKEVEEELNKYMSKERVVGLSLNKGLAYGNDVR-----FECMEKIQESMKKTMEEKFEEINIGREILTKKIDDLVEILKIMIDY

Query:  MKNTSVGAARVSTSNLYMAASEFEQELDEIEKEQEEKEEEKEFVDGSDHPTTIRINDDNQDDEGQ
        +++    ++    ++ +M A  FE+ LD+++++QEE + E   +D S +PT +   DD++D +G+
Subjt:  MKNTSVGAARVSTSNLYMAASEFEQELDEIEKEQEEKEEEKEFVDGSDHPTTIRINDDNQDDEGQ

TYK30414.1 protein Ycf2-like [Cucumis melo var. makuwa]3.8e-1030.81Show/hide
Query:  MNMPYFAPFLENEKRVMKEVEEELNKYMSKERVVGLSLNKGL--AYGNDVRFECMEKIQESMKK---TMEEKFEEINIGREILTKKIDDLVEILKIMIDY
        + MPYFAPF+E EK ++KE E+EL K  + + +  +SLN+G+    G DV  + ++KI+ S K+   ++E   E +      L  + ++L + +  +I+ 
Subjt:  MNMPYFAPFLENEKRVMKEVEEELNKYMSKERVVGLSLNKGL--AYGNDVRFECMEKIQESMKK---TMEEKFEEINIGREILTKKIDDLVEILKIMIDY

Query:  MKNTSVGAARVSTSNLYMAASEFEQELDEIEKEQEEKEEEKEFVDGSDHPTTIRINDDNQDDEGQGKKDPQS
        +++    ++    ++ +M A  FE+ LD++E +QEE + E   +D S +PT +   DD++D  G+G  D ++
Subjt:  MKNTSVGAARVSTSNLYMAASEFEQELDEIEKEQEEKEEEKEFVDGSDHPTTIRINDDNQDDEGQGKKDPQS

XP_038887714.1 cilia- and flagella-associated protein 251-like [Benincasa hispida]4.0e-3656.55Show/hide
Query:  MNMPYFAPFLENEKRVMKEVEEELNKYMSKERVVGLSLNK--GLAYGND--VRFECMEKIQESMKKTMEEKFEEINIGREILTKKIDDLVEILKIMIDYM
        M M YFAPF+  EK+V++EVEEE+++Y  ++RVV LSLN+  GL++  D   RFE + KIQ+ M   M+E F+ + I + ILTKKIDDLVE LK MIDYM
Subjt:  MNMPYFAPFLENEKRVMKEVEEELNKYMSKERVVGLSLNK--GLAYGND--VRFECMEKIQESMKKTMEEKFEEINIGREILTKKIDDLVEILKIMIDYM

Query:  KNTSVGAARVSTSNLYMAASEFEQELDEIEKEQEEKEEEKEFVDGSDHPTTIRINDDNQDDEGQGKKD
        K      +  STSNL+M  S+FE+ELD IEKEQEEKEE+K  VD  D PT IR  DD++D+EGQG KD
Subjt:  KNTSVGAARVSTSNLYMAASEFEQELDEIEKEQEEKEEEKEFVDGSDHPTTIRINDDNQDDEGQGKKD

TrEMBL top hitse value%identityAlignment
A0A5A7STD7 Protein Ycf2-like2.6e-0930.18Show/hide
Query:  MNMPYFAPFLENEKRVMKEVEEELNKYMSKERVVGLSLNKGL--AYGNDVRFECMEKIQESMKK---TMEEKFEEINIGREILTKKIDDLVEILKIMIDY
        + MPYFAPF+E EK ++KE E+EL K  + + +  +SLN+G+    G DV  + +EKI+ S K+   ++E   E +      +  + ++L + +  +I+ 
Subjt:  MNMPYFAPFLENEKRVMKEVEEELNKYMSKERVVGLSLNKGL--AYGNDVRFECMEKIQESMKK---TMEEKFEEINIGREILTKKIDDLVEILKIMIDY

Query:  MKNTSVGAARVSTSNLYMAASEFEQELDEIEKEQEEKEEEKEFVDGSDHPTTIRINDDNQDDEGQGKKD
        +K+    ++    ++ +M A  FE+ L+++E++QEE ++ K     S +PT +   DD++D + +G  D
Subjt:  MKNTSVGAARVSTSNLYMAASEFEQELDEIEKEQEEKEEEKEFVDGSDHPTTIRINDDNQDDEGQGKKD

A0A5A7T3K3 Protein Ycf2-like1.8e-1030.81Show/hide
Query:  MNMPYFAPFLENEKRVMKEVEEELNKYMSKERVVGLSLNKGL--AYGNDVRFECMEKIQESMKK---TMEEKFEEINIGREILTKKIDDLVEILKIMIDY
        + MPYFAPF+E EK ++KE E+EL K  + + +  +SLN+G+    G DV  + ++KI+ S K+   ++E   E +      L  + ++L + +  +I+ 
Subjt:  MNMPYFAPFLENEKRVMKEVEEELNKYMSKERVVGLSLNKGL--AYGNDVRFECMEKIQESMKK---TMEEKFEEINIGREILTKKIDDLVEILKIMIDY

Query:  MKNTSVGAARVSTSNLYMAASEFEQELDEIEKEQEEKEEEKEFVDGSDHPTTIRINDDNQDDEGQGKKDPQS
        +++    ++    ++ +M A  FE+ LD++E +QEE + E   +D S +PT +   DD++D  G+G  D ++
Subjt:  MKNTSVGAARVSTSNLYMAASEFEQELDEIEKEQEEKEEEKEFVDGSDHPTTIRINDDNQDDEGQGKKDPQS

A0A5A7TF74 Protein Ycf2-like3.8e-0827.88Show/hide
Query:  MNMPYFAPFLENEKRVMKEVEEELNKYMSKERVVGLSLNKGLAYGNDVR-----FECMEKIQESMKKTMEEKFEEINIGREILTKKIDDLVEILKIMIDY
        + MPYFAPF+E EK ++KE E+EL K  + + +  +SLN+G+   + +       E  E  Q+ M+ ++E   E +      +  +  +L + +  +I+ 
Subjt:  MNMPYFAPFLENEKRVMKEVEEELNKYMSKERVVGLSLNKGLAYGNDVR-----FECMEKIQESMKKTMEEKFEEINIGREILTKKIDDLVEILKIMIDY

Query:  MKNTSVGAARVSTSNLYMAASEFEQELDEIEKEQEEKEEEKEFVDGSDHPTTIRINDDNQDDEGQ
        +++    ++    ++ +M A  FE+ LD+++++QEE + E   +D S +PT +   DD++D +G+
Subjt:  MKNTSVGAARVSTSNLYMAASEFEQELDEIEKEQEEKEEEKEFVDGSDHPTTIRINDDNQDDEGQ

A0A5D3D818 Protein Ycf2-like3.8e-0827.88Show/hide
Query:  MNMPYFAPFLENEKRVMKEVEEELNKYMSKERVVGLSLNKGLAYGNDVR-----FECMEKIQESMKKTMEEKFEEINIGREILTKKIDDLVEILKIMIDY
        + MPYFAPF+E EK ++KE E+EL K  + + +  +SLN+G+   + +       E  E  Q+ M+ ++E   E +      +  +  +L + +  +I+ 
Subjt:  MNMPYFAPFLENEKRVMKEVEEELNKYMSKERVVGLSLNKGLAYGNDVR-----FECMEKIQESMKKTMEEKFEEINIGREILTKKIDDLVEILKIMIDY

Query:  MKNTSVGAARVSTSNLYMAASEFEQELDEIEKEQEEKEEEKEFVDGSDHPTTIRINDDNQDDEGQ
        +++    ++    ++ +M A  FE+ LD+++++QEE + E   +D S +PT +   DD++D +G+
Subjt:  MKNTSVGAARVSTSNLYMAASEFEQELDEIEKEQEEKEEEKEFVDGSDHPTTIRINDDNQDDEGQ

A0A5D3E3E8 Protein Ycf2-like1.8e-1030.81Show/hide
Query:  MNMPYFAPFLENEKRVMKEVEEELNKYMSKERVVGLSLNKGL--AYGNDVRFECMEKIQESMKK---TMEEKFEEINIGREILTKKIDDLVEILKIMIDY
        + MPYFAPF+E EK ++KE E+EL K  + + +  +SLN+G+    G DV  + ++KI+ S K+   ++E   E +      L  + ++L + +  +I+ 
Subjt:  MNMPYFAPFLENEKRVMKEVEEELNKYMSKERVVGLSLNKGL--AYGNDVRFECMEKIQESMKK---TMEEKFEEINIGREILTKKIDDLVEILKIMIDY

Query:  MKNTSVGAARVSTSNLYMAASEFEQELDEIEKEQEEKEEEKEFVDGSDHPTTIRINDDNQDDEGQGKKDPQS
        +++    ++    ++ +M A  FE+ LD++E +QEE + E   +D S +PT +   DD++D  G+G  D ++
Subjt:  MKNTSVGAARVSTSNLYMAASEFEQELDEIEKEQEEKEEEKEFVDGSDHPTTIRINDDNQDDEGQGKKDPQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATATGCCATATTTTGCCCCGTTCCTTGAGAATGAAAAAAGAGTGATGAAAGAGGTTGAAGAAGAATTGAACAAGTATATGTCGAAAGAAAGAGTGGTTGGGCTTTC
ATTGAATAAAGGACTCGCTTATGGGAATGATGTAAGGTTTGAATGCATGGAGAAGATACAAGAATCAATGAAGAAAACAATGGAGGAAAAATTTGAAGAAATAAATATTG
GTAGAGAAATATTGACAAAGAAAATAGATGACTTGGTTGAAATATTAAAAATAATGATTGACTACATGAAAAATACATCTGTTGGTGCAGCACGTGTTTCGACAAGTAAT
TTGTATATGGCAGCATCTGAATTCGAACAAGAACTTGATGAAATTGAGAAAGAACAGGAAGAAAAGGAAGAAGAAAAAGAGTTTGTTGATGGTTCTGATCATCCAACAAC
AATTAGAATAAACGATGACAACCAAGATGATGAAGGACAAGGAAAGAAGGACCCACAATCCACGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATATGCCATATTTTGCCCCGTTCCTTGAGAATGAAAAAAGAGTGATGAAAGAGGTTGAAGAAGAATTGAACAAGTATATGTCGAAAGAAAGAGTGGTTGGGCTTTC
ATTGAATAAAGGACTCGCTTATGGGAATGATGTAAGGTTTGAATGCATGGAGAAGATACAAGAATCAATGAAGAAAACAATGGAGGAAAAATTTGAAGAAATAAATATTG
GTAGAGAAATATTGACAAAGAAAATAGATGACTTGGTTGAAATATTAAAAATAATGATTGACTACATGAAAAATACATCTGTTGGTGCAGCACGTGTTTCGACAAGTAAT
TTGTATATGGCAGCATCTGAATTCGAACAAGAACTTGATGAAATTGAGAAAGAACAGGAAGAAAAGGAAGAAGAAAAAGAGTTTGTTGATGGTTCTGATCATCCAACAAC
AATTAGAATAAACGATGACAACCAAGATGATGAAGGACAAGGAAAGAAGGACCCACAATCCACGTAG
Protein sequenceShow/hide protein sequence
MNMPYFAPFLENEKRVMKEVEEELNKYMSKERVVGLSLNKGLAYGNDVRFECMEKIQESMKKTMEEKFEEINIGREILTKKIDDLVEILKIMIDYMKNTSVGAARVSTSN
LYMAASEFEQELDEIEKEQEEKEEEKEFVDGSDHPTTIRINDDNQDDEGQGKKDPQST