; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10021560 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021560
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProtein Ycf2-like
Genome locationChr05:11423203..11424764
RNA-Seq ExpressionHG10021560
SyntenyHG10021560
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR015410 - Domain of unknown function DUF1985


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047596.1 protein Ycf2-like [Cucumis melo var. makuwa]6.3e-7449.86Show/hide
Query:  QQGTKDTMVGGVGVKCGSPKSNQKRDRETSTIDVNVITKKTRTQTKNVRKIVNKKRKDIKDAQEEEEQDEQEETREEHDSNEGEEDESKLEENFENMFEE
        ++  +D M  G G K  SP++++KR R  +  +   + KK R     ++ +V++KR      ++++E + +    E+ +S+  E            +  +
Subjt:  QQGTKDTMVGGVGVKCGSPKSNQKRDRETSTIDVNVITKKTRTQTKNVRKIVNKKRKDIKDAQEEEEQDEQEETREEHDSNEGEEDESKLEENFENMFEE

Query:  TKDNEEANSESHGDTIETKKESSSKGSNKKKQK----EKGKKDELYLMSAERKNEPLKINLQTKCTVIEKLKENLDEELQEKFRNTIFGHFLDFSITNQS
        T+   +A  E        +KE  ++   ++K K     +  +D +YLM +ER+NEPLKINL  K TVIEK+KENL + L  +FR  IFGHFL+ SITNQS
Subjt:  TKDNEEANSESHGDTIETKKESSSKGSNKKKQK----EKGKKDELYLMSAERKNEPLKINLQTKCTVIEKLKENLDEELQEKFRNTIFGHFLDFSITNQS

Query:  SQLLLHLIQRMCKPKSSSQLNFLIGNRVLKFGLREFALIVGLNCGELPIIDQSMIKGGGNIKKMYFDNRKYVTRMFLNIIFNNSKADSDSDRIKMAKLYF
        SQLLLHLIQRMCKPKS+SQL FLIG RVL+FGLREFALI GL C E+P I+   I GGG +K +YF+N K VTR +LN++FN S   +D DRIKMAKLYF
Subjt:  SQLLLHLIQRMCKPKSSSQLNFLIGNRVLKFGLREFALIVGLNCGELPIIDQSMIKGGGNIKKMYFDNRKYVTRMFLNIIFNNSKADSDSDRIKMAKLYF

Query:  LESFLIPKQETLNLELEHILMVDDDELFDNYPWGRVAFDLLVKFMNRVVSSKGQTEI
        LESFLIPKQE  +++ +HI+MVDDDE+FD YPWGRVAF+LLV FMNRVV SKGQT I
Subjt:  LESFLIPKQETLNLELEHILMVDDDELFDNYPWGRVAFDLLVKFMNRVVSSKGQTEI
KAA0051382.1 protein Ycf2-like [Cucumis melo var. makuwa]6.8e-5270.07Show/hide
Query:  MCKPKSSSQLNFLIGNRVLKFGLREFALIVGLNCGELPIIDQSMIKGGGNIKKMYFDNRKYVTRMFLNIIFNNSKADSDSDRIKMAKLYFLESFLIPKQE
        MCKPKS+S+L FLIG RVL+FGLREFALI GL C E+P I+   IKGGG +K +YF+N K V R +LN++FN S A +D DRIKMAKLYFLESFLIPKQE
Subjt:  MCKPKSSSQLNFLIGNRVLKFGLREFALIVGLNCGELPIIDQSMIKGGGNIKKMYFDNRKYVTRMFLNIIFNNSKADSDSDRIKMAKLYFLESFLIPKQE

Query:  TLNLELEHILMVDDDELFDNYPWGRVAFDLLVKFMNRVVSSKGQTEI
         L+++ +HI+MVDDDE+FD YPWGRVAF+LLV FMNRVV SKGQT I
Subjt:  TLNLELEHILMVDDDELFDNYPWGRVAFDLLVKFMNRVVSSKGQTEI
KAA0061272.1 uncharacterized protein E6C27_scaffold455G001150 [Cucumis melo var. makuwa]5.2e-5271.03Show/hide
Query:  MCKPKSSSQLNFLIGNRVLKFGLREFALIVGLNCGELPIIDQSMIKGGGNIKKMYFDNRKYVTRMFLNIIFNNSKADSDSDRIKMAKLYFLESFLIPKQE
        MCKPKS+SQL FLIG RVL+FGLREFALI GL C E+P I+   IKGGG +K +YF+N K VTR +LN++FN S A +D DRIKMAKLYFLESFLIPKQE
Subjt:  MCKPKSSSQLNFLIGNRVLKFGLREFALIVGLNCGELPIIDQSMIKGGGNIKKMYFDNRKYVTRMFLNIIFNNSKADSDSDRIKMAKLYFLESFLIPKQE

Query:  TLNLELEHILMVDDDELFDNYPWGRVAFDLLVKFMNRVVSSKGQT
         L+++ +HI+MVDDDE+FD YPWGRVAF+LLV FMNR V SKGQT
Subjt:  TLNLELEHILMVDDDELFDNYPWGRVAFDLLVKFMNRVVSSKGQT
TYK09852.1 protein Ycf2-like [Cucumis melo var. makuwa]2.3e-5270.75Show/hide
Query:  MCKPKSSSQLNFLIGNRVLKFGLREFALIVGLNCGELPIIDQSMIKGGGNIKKMYFDNRKYVTRMFLNIIFNNSKADSDSDRIKMAKLYFLESFLIPKQE
        MCKPKS+SQL FLIG RVL+FGLREFALI GL C E+P I+   IKGGG +K +YF+N K VTR +LN++FN S A +D DRIKMAKLYFLESFLIPKQE
Subjt:  MCKPKSSSQLNFLIGNRVLKFGLREFALIVGLNCGELPIIDQSMIKGGGNIKKMYFDNRKYVTRMFLNIIFNNSKADSDSDRIKMAKLYFLESFLIPKQE

Query:  TLNLELEHILMVDDDELFDNYPWGRVAFDLLVKFMNRVVSSKGQTEI
         L+++ +HI+MVDDDE+FD YPWGRVAF+LLV FMNR V SKGQT I
Subjt:  TLNLELEHILMVDDDELFDNYPWGRVAFDLLVKFMNRVVSSKGQTEI
TYK23840.1 protein Ycf2-like [Cucumis melo var. makuwa]6.8e-5270.07Show/hide
Query:  MCKPKSSSQLNFLIGNRVLKFGLREFALIVGLNCGELPIIDQSMIKGGGNIKKMYFDNRKYVTRMFLNIIFNNSKADSDSDRIKMAKLYFLESFLIPKQE
        MCKPKS+S+L FLIG RVL+FGLREFALI GL C E+P I+   IKGGG +K +YF+N K V R +LN++FN S A +D DRIKMAKLYFLESFLIPKQE
Subjt:  MCKPKSSSQLNFLIGNRVLKFGLREFALIVGLNCGELPIIDQSMIKGGGNIKKMYFDNRKYVTRMFLNIIFNNSKADSDSDRIKMAKLYFLESFLIPKQE

Query:  TLNLELEHILMVDDDELFDNYPWGRVAFDLLVKFMNRVVSSKGQTEI
         L+++ +HI+MVDDDE+FD YPWGRVAF+LLV FMNRVV SKGQT I
Subjt:  TLNLELEHILMVDDDELFDNYPWGRVAFDLLVKFMNRVVSSKGQTEI
TrEMBL top hitse value%identityAlignment
A0A5A7U047 Protein Ycf2-like3.0e-7449.86Show/hide
Query:  QQGTKDTMVGGVGVKCGSPKSNQKRDRETSTIDVNVITKKTRTQTKNVRKIVNKKRKDIKDAQEEEEQDEQEETREEHDSNEGEEDESKLEENFENMFEE
        ++  +D M  G G K  SP++++KR R  +  +   + KK R     ++ +V++KR      ++++E + +    E+ +S+  E            +  +
Subjt:  QQGTKDTMVGGVGVKCGSPKSNQKRDRETSTIDVNVITKKTRTQTKNVRKIVNKKRKDIKDAQEEEEQDEQEETREEHDSNEGEEDESKLEENFENMFEE

Query:  TKDNEEANSESHGDTIETKKESSSKGSNKKKQK----EKGKKDELYLMSAERKNEPLKINLQTKCTVIEKLKENLDEELQEKFRNTIFGHFLDFSITNQS
        T+   +A  E        +KE  ++   ++K K     +  +D +YLM +ER+NEPLKINL  K TVIEK+KENL + L  +FR  IFGHFL+ SITNQS
Subjt:  TKDNEEANSESHGDTIETKKESSSKGSNKKKQK----EKGKKDELYLMSAERKNEPLKINLQTKCTVIEKLKENLDEELQEKFRNTIFGHFLDFSITNQS

Query:  SQLLLHLIQRMCKPKSSSQLNFLIGNRVLKFGLREFALIVGLNCGELPIIDQSMIKGGGNIKKMYFDNRKYVTRMFLNIIFNNSKADSDSDRIKMAKLYF
        SQLLLHLIQRMCKPKS+SQL FLIG RVL+FGLREFALI GL C E+P I+   I GGG +K +YF+N K VTR +LN++FN S   +D DRIKMAKLYF
Subjt:  SQLLLHLIQRMCKPKSSSQLNFLIGNRVLKFGLREFALIVGLNCGELPIIDQSMIKGGGNIKKMYFDNRKYVTRMFLNIIFNNSKADSDSDRIKMAKLYF

Query:  LESFLIPKQETLNLELEHILMVDDDELFDNYPWGRVAFDLLVKFMNRVVSSKGQTEI
        LESFLIPKQE  +++ +HI+MVDDDE+FD YPWGRVAF+LLV FMNRVV SKGQT I
Subjt:  LESFLIPKQETLNLELEHILMVDDDELFDNYPWGRVAFDLLVKFMNRVVSSKGQTEI
A0A5A7U6E1 Protein Ycf2-like3.3e-5270.07Show/hide
Query:  MCKPKSSSQLNFLIGNRVLKFGLREFALIVGLNCGELPIIDQSMIKGGGNIKKMYFDNRKYVTRMFLNIIFNNSKADSDSDRIKMAKLYFLESFLIPKQE
        MCKPKS+S+L FLIG RVL+FGLREFALI GL C E+P I+   IKGGG +K +YF+N K V R +LN++FN S A +D DRIKMAKLYFLESFLIPKQE
Subjt:  MCKPKSSSQLNFLIGNRVLKFGLREFALIVGLNCGELPIIDQSMIKGGGNIKKMYFDNRKYVTRMFLNIIFNNSKADSDSDRIKMAKLYFLESFLIPKQE

Query:  TLNLELEHILMVDDDELFDNYPWGRVAFDLLVKFMNRVVSSKGQTEI
         L+++ +HI+MVDDDE+FD YPWGRVAF+LLV FMNRVV SKGQT I
Subjt:  TLNLELEHILMVDDDELFDNYPWGRVAFDLLVKFMNRVVSSKGQTEI
A0A5A7UZD6 DUF1985 domain-containing protein2.5e-5271.03Show/hide
Query:  MCKPKSSSQLNFLIGNRVLKFGLREFALIVGLNCGELPIIDQSMIKGGGNIKKMYFDNRKYVTRMFLNIIFNNSKADSDSDRIKMAKLYFLESFLIPKQE
        MCKPKS+SQL FLIG RVL+FGLREFALI GL C E+P I+   IKGGG +K +YF+N K VTR +LN++FN S A +D DRIKMAKLYFLESFLIPKQE
Subjt:  MCKPKSSSQLNFLIGNRVLKFGLREFALIVGLNCGELPIIDQSMIKGGGNIKKMYFDNRKYVTRMFLNIIFNNSKADSDSDRIKMAKLYFLESFLIPKQE

Query:  TLNLELEHILMVDDDELFDNYPWGRVAFDLLVKFMNRVVSSKGQT
         L+++ +HI+MVDDDE+FD YPWGRVAF+LLV FMNR V SKGQT
Subjt:  TLNLELEHILMVDDDELFDNYPWGRVAFDLLVKFMNRVVSSKGQT
A0A5D3CEX9 Protein Ycf2-like1.1e-5270.75Show/hide
Query:  MCKPKSSSQLNFLIGNRVLKFGLREFALIVGLNCGELPIIDQSMIKGGGNIKKMYFDNRKYVTRMFLNIIFNNSKADSDSDRIKMAKLYFLESFLIPKQE
        MCKPKS+SQL FLIG RVL+FGLREFALI GL C E+P I+   IKGGG +K +YF+N K VTR +LN++FN S A +D DRIKMAKLYFLESFLIPKQE
Subjt:  MCKPKSSSQLNFLIGNRVLKFGLREFALIVGLNCGELPIIDQSMIKGGGNIKKMYFDNRKYVTRMFLNIIFNNSKADSDSDRIKMAKLYFLESFLIPKQE

Query:  TLNLELEHILMVDDDELFDNYPWGRVAFDLLVKFMNRVVSSKGQTEI
         L+++ +HI+MVDDDE+FD YPWGRVAF+LLV FMNR V SKGQT I
Subjt:  TLNLELEHILMVDDDELFDNYPWGRVAFDLLVKFMNRVVSSKGQTEI
A0A5D3DKA6 Protein Ycf2-like3.3e-5270.07Show/hide
Query:  MCKPKSSSQLNFLIGNRVLKFGLREFALIVGLNCGELPIIDQSMIKGGGNIKKMYFDNRKYVTRMFLNIIFNNSKADSDSDRIKMAKLYFLESFLIPKQE
        MCKPKS+S+L FLIG RVL+FGLREFALI GL C E+P I+   IKGGG +K +YF+N K V R +LN++FN S A +D DRIKMAKLYFLESFLIPKQE
Subjt:  MCKPKSSSQLNFLIGNRVLKFGLREFALIVGLNCGELPIIDQSMIKGGGNIKKMYFDNRKYVTRMFLNIIFNNSKADSDSDRIKMAKLYFLESFLIPKQE

Query:  TLNLELEHILMVDDDELFDNYPWGRVAFDLLVKFMNRVVSSKGQTEI
         L+++ +HI+MVDDDE+FD YPWGRVAF+LLV FMNRVV SKGQT I
Subjt:  TLNLELEHILMVDDDELFDNYPWGRVAFDLLVKFMNRVVSSKGQTEI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G31150.1 Domain of unknown function (DUF1985)6.2e-1125.61Show/hide
Query:  EKFRNTIFGHFLDFSIT--NQSSQLLLHLIQRMCKPKSSSQLNFLIGNRVLKFGLREFALIVGLNCGELPIIDQSMIKGGGNIKKMYFDNRKYVTRMFLN
        E+ +++ FG   +F +   + S +L+  L+ R    K   +L F+ G   ++F +REF ++ GL CG+LP  D+  +K   + K +   NR +  +  + 
Subjt:  EKFRNTIFGHFLDFSIT--NQSSQLLLHLIQRMCKPKSSSQLNFLIGNRVLKFGLREFALIVGLNCGELPIIDQSMIKGGGNIKKMYFDNRKYVTRMFLN

Query:  I----IFNNSKADSDSDRIKMAKLYFLESFLIPKQETLNLELEHILMVDDDELFDNYPWGRVAF
        I         K  S   ++ +A +  ++  ++   ++  + L+ + M++D + F  YPWGR AF
Subjt:  I----IFNNSKADSDSDRIKMAKLYFLESFLIPKQETLNLELEHILMVDDDELFDNYPWGRVAF
AT5G45570.1 Ulp1 protease family protein4.1e-0725.81Show/hide
Query:  ERKNEPLKINLQTKCTV--IEKLKENLDEELQEKFRNTIFGHFLDFSITN--QSSQLLLHLIQRMCKPKSSSQLNFLIGNRVLKFGLREFALIVGLNCGE
        E K+   K ++   C V  I K+K+ L  ++ ++ + T  G F+ F+ +    ++Q +   +    +  +  ++  LI  R ++F L EF  I GLNC  
Subjt:  ERKNEPLKINLQTKCTV--IEKLKENLDEELQEKFRNTIFGHFLDFSITN--QSSQLLLHLIQRMCKPKSSSQLNFLIGNRVLKFGLREFALIVGLNCGE

Query:  LPIIDQSMIKGGGNIKKMYFDNRKYVTRMF------LNIIFNNSKADSDSDRIKMAKLYFLESFLIPKQETLNLELEHILMVDDDELFDNYPWGRVAFDL
          + D+S     G      F N   V+         L  +F  SK  S   R+ + +L  L   +        + L     V D   F+ YPWGRVAFD 
Subjt:  LPIIDQSMIKGGGNIKKMYFDNRKYVTRMF------LNIIFNNSKADSDSDRIKMAKLYFLESFLIPKQETLNLELEHILMVDDDELFDNYPWGRVAFDL

Query:  LVKFMNRVVSSKGQTEI
        L + + ++V   G + +
Subjt:  LVKFMNRVVSSKGQTEI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACCGTATGTACAACAGGGCACAAAGGATACAATGGTTGGGGGAGTAGGTGTCAAATGTGGAAGTCCAAAAAGTAACCAAAAAAGAGATCGAGAGACCTCTACAAT
AGATGTGAATGTTATAACGAAAAAAACAAGAACACAGACCAAGAATGTGAGAAAGATAGTAAACAAAAAAAGGAAGGATATAAAGGACGCACAAGAAGAAGAGGAGCAAG
ACGAACAAGAAGAGACTAGGGAAGAACACGACAGTAATGAGGGTGAAGAGGATGAATCAAAACTTGAAGAGAATTTTGAAAACATGTTTGAGGAAACAAAAGATAATGAA
GAAGCCAACTCAGAAAGTCATGGAGACACAATAGAGACAAAAAAAGAATCTTCAAGCAAAGGGTCGAACAAAAAGAAACAGAAGGAGAAAGGAAAAAAAGATGAGTTGTA
TCTAATGAGTGCTGAAAGGAAAAATGAACCACTGAAAATAAACTTGCAAACAAAGTGTACAGTAATTGAAAAGCTGAAGGAAAATTTAGATGAAGAATTGCAAGAGAAGT
TTAGAAATACAATATTTGGACATTTCCTTGATTTTTCAATTACAAATCAATCATCACAACTTTTGTTACATTTAATCCAAAGAATGTGTAAACCTAAGTCTTCCAGTCAG
TTGAATTTCTTGATAGGCAATCGGGTATTAAAGTTTGGTTTAAGGGAATTTGCTTTGATAGTTGGTTTAAATTGTGGCGAACTACCGATAATTGATCAAAGTATGATAAA
AGGTGGGGGAAATATAAAGAAAATGTACTTTGATAATCGAAAGTATGTGACAAGGATGTTCCTTAACATAATCTTCAATAATAGCAAAGCCGACTCTGACAGTGACAGAA
TAAAAATGGCTAAATTGTATTTTCTAGAGAGTTTTCTTATCCCAAAACAAGAGACTCTGAATTTGGAATTGGAGCATATACTAATGGTAGATGATGATGAGTTGTTTGAC
AACTATCCATGGGGAAGGGTTGCTTTTGATCTCCTAGTTAAATTCATGAATAGAGTAGTAAGCAGCAAAGGCCAAACGGAAATAGAGGGTTTATATTCCCAATATTGGCA
TGGGCATATGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGACCGTATGTACAACAGGGCACAAAGGATACAATGGTTGGGGGAGTAGGTGTCAAATGTGGAAGTCCAAAAAGTAACCAAAAAAGAGATCGAGAGACCTCTACAAT
AGATGTGAATGTTATAACGAAAAAAACAAGAACACAGACCAAGAATGTGAGAAAGATAGTAAACAAAAAAAGGAAGGATATAAAGGACGCACAAGAAGAAGAGGAGCAAG
ACGAACAAGAAGAGACTAGGGAAGAACACGACAGTAATGAGGGTGAAGAGGATGAATCAAAACTTGAAGAGAATTTTGAAAACATGTTTGAGGAAACAAAAGATAATGAA
GAAGCCAACTCAGAAAGTCATGGAGACACAATAGAGACAAAAAAAGAATCTTCAAGCAAAGGGTCGAACAAAAAGAAACAGAAGGAGAAAGGAAAAAAAGATGAGTTGTA
TCTAATGAGTGCTGAAAGGAAAAATGAACCACTGAAAATAAACTTGCAAACAAAGTGTACAGTAATTGAAAAGCTGAAGGAAAATTTAGATGAAGAATTGCAAGAGAAGT
TTAGAAATACAATATTTGGACATTTCCTTGATTTTTCAATTACAAATCAATCATCACAACTTTTGTTACATTTAATCCAAAGAATGTGTAAACCTAAGTCTTCCAGTCAG
TTGAATTTCTTGATAGGCAATCGGGTATTAAAGTTTGGTTTAAGGGAATTTGCTTTGATAGTTGGTTTAAATTGTGGCGAACTACCGATAATTGATCAAAGTATGATAAA
AGGTGGGGGAAATATAAAGAAAATGTACTTTGATAATCGAAAGTATGTGACAAGGATGTTCCTTAACATAATCTTCAATAATAGCAAAGCCGACTCTGACAGTGACAGAA
TAAAAATGGCTAAATTGTATTTTCTAGAGAGTTTTCTTATCCCAAAACAAGAGACTCTGAATTTGGAATTGGAGCATATACTAATGGTAGATGATGATGAGTTGTTTGAC
AACTATCCATGGGGAAGGGTTGCTTTTGATCTCCTAGTTAAATTCATGAATAGAGTAGTAAGCAGCAAAGGCCAAACGGAAATAGAGGGTTTATATTCCCAATATTGGCA
TGGGCATATGAAGTAA
Protein sequenceShow/hide protein sequence
MRPYVQQGTKDTMVGGVGVKCGSPKSNQKRDRETSTIDVNVITKKTRTQTKNVRKIVNKKRKDIKDAQEEEEQDEQEETREEHDSNEGEEDESKLEENFENMFEETKDNE
EANSESHGDTIETKKESSSKGSNKKKQKEKGKKDELYLMSAERKNEPLKINLQTKCTVIEKLKENLDEELQEKFRNTIFGHFLDFSITNQSSQLLLHLIQRMCKPKSSSQ
LNFLIGNRVLKFGLREFALIVGLNCGELPIIDQSMIKGGGNIKKMYFDNRKYVTRMFLNIIFNNSKADSDSDRIKMAKLYFLESFLIPKQETLNLELEHILMVDDDELFD
NYPWGRVAFDLLVKFMNRVVSSKGQTEIEGLYSQYWHGHMK