; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10021571 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021571
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRibonuclease H domain
Genome locationChr05:11643770..11644558
RNA-Seq ExpressionHG10021571
SyntenyHG10021571
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OVA10548.1 Ribonuclease H domain [Macleaya cordata]4.5e-1827.68Show/hide
Query:  WALWADRNSQVHHLPIVETSVRVAWVASYFNEFCTANFLGTRLHPSSRVVVSTSMEGPSIWLPPQAGEFKLNTDVACHPESNMVGIGAVIKNSYEDLVVT
        WA+W  RN+ +        +  +   +   ++      + T   P ++ ++       S W PP++G FK+NTD A  P ++  G+G V ++S+  L ++
Subjt:  WALWADRNSQVHHLPIVETSVRVAWVASYFNEFCTANFLGTRLHPSSRVVVSTSMEGPSIWLPPQAGEFKLNTDVACHPESNMVGIGAVIKNSYEDLVVT

Query:  AADCILSRVAALEGEALALLFGLKLVQRMGISLIHVEIDSKALVNFI--KNDTGKFSLLGVVLCEIKNQMLNIQMKSFSHIPRLCNNVAHELFRWAWDNE
        AA   ++  +A E E  A+   +K      I+ + +E D+K +V  +  KN  G ++    +L +I+   L+ +  SF+++PR+CN VAHEL +W  ++ 
Subjt:  AADCILSRVAALEGEALALLFGLKLVQRMGISLIHVEIDSKALVNFI--KNDTGKFSLLGVVLCEIKNQMLNIQMKSFSHIPRLCNNVAHELFRWAWDNE

Query:  GSDEWSVSPLRWLCPLLFSDGSRC
            W   P+ WL P+L  D   C
Subjt:  GSDEWSVSPLRWLCPLLFSDGSRC

XP_021807757.1 uncharacterized protein LOC110751579 [Prunus avium]1.3e-1730.77Show/hide
Query:  WALWADRNSQVHHLPIVETSVRVAWVASYFNEFCTANFLGTRLHPSSRVVVSTSMEGPSIWLPPQAGEFKLNTDVACHPESNMVGIGAVIKNSYEDLVVT
        W +W D+N+++H           A       EF  AN +  R HP S           + W PP  G+ KLN D AC       G+GAV++N + DL+  
Subjt:  WALWADRNSQVHHLPIVETSVRVAWVASYFNEFCTANFLGTRLHPSSRVVVSTSMEGPSIWLPPQAGEFKLNTDVACHPESNMVGIGAVIKNSYEDLVVT

Query:  AADCILSRVAALEGEALALLFGLKLVQRMGISLIHVEIDSKALVNFIKNDTGKFSLLGVVLCEIKNQMLNIQMKSFSHIPRLCNNVAHELFRWAWDNEGS
         +  I    +A   E LA+  GL+     G   + VE D+K  +N I + T  F + G ++ +I     N    SF   PRLCN VA  L ++A  +   
Subjt:  AADCILSRVAALEGEALALLFGLKLVQRMGISLIHVEIDSKALVNFIKNDTGKFSLLGVVLCEIKNQMLNIQMKSFSHIPRLCNNVAHELFRWAWDNEGS

Query:  DEWSVSPLRWLCPLLFSDGSR
        D W      WL   L +D  R
Subjt:  DEWSVSPLRWLCPLLFSDGSR

XP_021809818.1 uncharacterized protein LOC110753261 [Prunus avium]2.2e-1730.22Show/hide
Query:  LFSVGCWALWADRNSQVHHLPIVETSVRVAWVASYFNEFCTANFLGTRLHPSSRVVVSTSMEGPSIWLPPQAGEFKLNTDVACHPESNMVGIGAVIKNSY
        LF   CW LW +RN  V     +E       V      F  A FL        +      +E PS W PP  G +KLN D A  PE+ + GIGAV++N  
Subjt:  LFSVGCWALWADRNSQVHHLPIVETSVRVAWVASYFNEFCTANFLGTRLHPSSRVVVSTSMEGPSIWLPPQAGEFKLNTDVACHPESNMVGIGAVIKNSY

Query:  EDLVVTAADCILSRVAALEGEALALLFGLKLVQRMGISLIHVEIDSKALVNFIKNDTGK-FSLLGVVLCEIKNQMLNIQMKSFSHIPRLCNNVAHELFRW
         +++   A  + +  ++   E +AL FG+   +  G S   +E DS+ +VN +K D  + ++  G ++ +IK  + + +  + S  PR CN VAH L R 
Subjt:  EDLVVTAADCILSRVAALEGEALALLFGLKLVQRMGISLIHVEIDSKALVNFIKNDTGK-FSLLGVVLCEIKNQMLNIQMKSFSHIPRLCNNVAHELFRW

Query:  AWDNEGSDEWSVSPLRWLCPLLFSD
        A + +    W      WL  ++  D
Subjt:  AWDNEGSDEWSVSPLRWLCPLLFSD

XP_030505962.1 uncharacterized protein LOC115720894 [Cannabis sativa]7.7e-1830.41Show/hide
Query:  WALWADRNSQVHHLPIVETSVRVAWVASYFNEFCTANFLGTRLHPSSRVVVSTSMEGPSIWLPPQAGEFKLNTDVACHPESNMVGIGAVIKNSYEDLVVT
        W LW DRN+ +H  P++  S   A  A+Y+  F   + +       +  ++ST     S W+ P   E K+N D AC    N +G+G +++NS   +V  
Subjt:  WALWADRNSQVHHLPIVETSVRVAWVASYFNEFCTANFLGTRLHPSSRVVVSTSMEGPSIWLPPQAGEFKLNTDVACHPESNMVGIGAVIKNSYEDLVVT

Query:  AADCILSRVAALEGEALALLFGLKLVQRMGISLIHVEIDSKALVNFIKNDTGKFSLLGVVLCEIKNQMLNIQMKSFSHIPRLCNNVAHELFRWA
         +     R  + E EA ALL GL       + +  +E DS  LVN I + +   S  G ++ +IKN++  +     SH+ R  N  AH L + A
Subjt:  AADCILSRVAALEGEALALLFGLKLVQRMGISLIHVEIDSKALVNFIKNDTGKFSLLGVVLCEIKNQMLNIQMKSFSHIPRLCNNVAHELFRWA

XP_038704726.1 uncharacterized protein LOC120000672 [Tripterygium wilfordii]1.1e-1627.24Show/hide
Query:  DRRVAIQDVMCASIL---GDASKVVLFSVGCWALWADRNSQVHHLPIVETSVRVAWVASYFNEFCTANFLGTRLHPSSRVVVSTSMEGPSIWLPPQAGEF
        +R ++ +D +   +L   G+ +K V++    WA+W ++NS +        +  + +V  Y  E+  A    +R  P     V  +++    W PP +G  
Subjt:  DRRVAIQDVMCASIL---GDASKVVLFSVGCWALWADRNSQVHHLPIVETSVRVAWVASYFNEFCTANFLGTRLHPSSRVVVSTSMEGPSIWLPPQAGEF

Query:  KLNTDVACHPESNMVGIGAVIKNSYEDLVVTAADCILSRVAALEGEALALLFGLKLVQRMGISLIHVEIDSKALVNFIKNDTGKFSLLGVVLCEIKNQML
        KL+ D A   E++ +G+GAVI++    +    ++C+         +A AL+ G +L   MG+S + +E DS  LVN I+++  + +  G +L +I++ + 
Subjt:  KLNTDVACHPESNMVGIGAVIKNSYEDLVVTAADCILSRVAALEGEALALLFGLKLVQRMGISLIHVEIDSKALVNFIKNDTGKFSLLGVVLCEIKNQML

Query:  NIQMKSFSHIPRLCNNVAHELFRWAWDNEGSDEWSVSPLRWL--CP
         I   S  +  RLCN VAH+L R + + +        P+RW+  CP
Subjt:  NIQMKSFSHIPRLCNNVAHELFRWAWDNEGSDEWSVSPLRWL--CP

TrEMBL top hitse value%identityAlignment
A0A200QJ57 Ribonuclease H domain2.2e-1827.68Show/hide
Query:  WALWADRNSQVHHLPIVETSVRVAWVASYFNEFCTANFLGTRLHPSSRVVVSTSMEGPSIWLPPQAGEFKLNTDVACHPESNMVGIGAVIKNSYEDLVVT
        WA+W  RN+ +        +  +   +   ++      + T   P ++ ++       S W PP++G FK+NTD A  P ++  G+G V ++S+  L ++
Subjt:  WALWADRNSQVHHLPIVETSVRVAWVASYFNEFCTANFLGTRLHPSSRVVVSTSMEGPSIWLPPQAGEFKLNTDVACHPESNMVGIGAVIKNSYEDLVVT

Query:  AADCILSRVAALEGEALALLFGLKLVQRMGISLIHVEIDSKALVNFI--KNDTGKFSLLGVVLCEIKNQMLNIQMKSFSHIPRLCNNVAHELFRWAWDNE
        AA   ++  +A E E  A+   +K      I+ + +E D+K +V  +  KN  G ++    +L +I+   L+ +  SF+++PR+CN VAHEL +W  ++ 
Subjt:  AADCILSRVAALEGEALALLFGLKLVQRMGISLIHVEIDSKALVNFI--KNDTGKFSLLGVVLCEIKNQMLNIQMKSFSHIPRLCNNVAHELFRWAWDNE

Query:  GSDEWSVSPLRWLCPLLFSDGSRC
            W   P+ WL P+L  D   C
Subjt:  GSDEWSVSPLRWLCPLLFSDGSRC

A0A6P5RZ31 uncharacterized protein LOC1107515796.3e-1830.77Show/hide
Query:  WALWADRNSQVHHLPIVETSVRVAWVASYFNEFCTANFLGTRLHPSSRVVVSTSMEGPSIWLPPQAGEFKLNTDVACHPESNMVGIGAVIKNSYEDLVVT
        W +W D+N+++H           A       EF  AN +  R HP S           + W PP  G+ KLN D AC       G+GAV++N + DL+  
Subjt:  WALWADRNSQVHHLPIVETSVRVAWVASYFNEFCTANFLGTRLHPSSRVVVSTSMEGPSIWLPPQAGEFKLNTDVACHPESNMVGIGAVIKNSYEDLVVT

Query:  AADCILSRVAALEGEALALLFGLKLVQRMGISLIHVEIDSKALVNFIKNDTGKFSLLGVVLCEIKNQMLNIQMKSFSHIPRLCNNVAHELFRWAWDNEGS
         +  I    +A   E LA+  GL+     G   + VE D+K  +N I + T  F + G ++ +I     N    SF   PRLCN VA  L ++A  +   
Subjt:  AADCILSRVAALEGEALALLFGLKLVQRMGISLIHVEIDSKALVNFIKNDTGKFSLLGVVLCEIKNQMLNIQMKSFSHIPRLCNNVAHELFRWAWDNEGS

Query:  DEWSVSPLRWLCPLLFSDGSR
        D W      WL   L +D  R
Subjt:  DEWSVSPLRWLCPLLFSDGSR

A0A6P5S7Q3 uncharacterized protein LOC1107532611.1e-1730.22Show/hide
Query:  LFSVGCWALWADRNSQVHHLPIVETSVRVAWVASYFNEFCTANFLGTRLHPSSRVVVSTSMEGPSIWLPPQAGEFKLNTDVACHPESNMVGIGAVIKNSY
        LF   CW LW +RN  V     +E       V      F  A FL        +      +E PS W PP  G +KLN D A  PE+ + GIGAV++N  
Subjt:  LFSVGCWALWADRNSQVHHLPIVETSVRVAWVASYFNEFCTANFLGTRLHPSSRVVVSTSMEGPSIWLPPQAGEFKLNTDVACHPESNMVGIGAVIKNSY

Query:  EDLVVTAADCILSRVAALEGEALALLFGLKLVQRMGISLIHVEIDSKALVNFIKNDTGK-FSLLGVVLCEIKNQMLNIQMKSFSHIPRLCNNVAHELFRW
         +++   A  + +  ++   E +AL FG+   +  G S   +E DS+ +VN +K D  + ++  G ++ +IK  + + +  + S  PR CN VAH L R 
Subjt:  EDLVVTAADCILSRVAALEGEALALLFGLKLVQRMGISLIHVEIDSKALVNFIKNDTGK-FSLLGVVLCEIKNQMLNIQMKSFSHIPRLCNNVAHELFRW

Query:  AWDNEGSDEWSVSPLRWLCPLLFSD
        A + +    W      WL  ++  D
Subjt:  AWDNEGSDEWSVSPLRWLCPLLFSD

A0A803NGI9 Uncharacterized protein2.4e-1728.7Show/hide
Query:  VMCASILGDASKVVLFSVGCWALWADRNSQVHHLPIVETSVRVAWVASYFNEFCTANFLGTRLHPSSRVVVSTSMEGPSIWLPPQAGEFKLNTDVACHPE
        +M  S L   S++       W LW DRN+ +H  P +  +   A   +YF  F        +   S  +  ST       W+ P   + K+N D AC   
Subjt:  VMCASILGDASKVVLFSVGCWALWADRNSQVHHLPIVETSVRVAWVASYFNEFCTANFLGTRLHPSSRVVVSTSMEGPSIWLPPQAGEFKLNTDVACHPE

Query:  SNMVGIGAVIKNSYEDLVVTAADCILSRVAALEGEALALLFGLKLVQRMGISLIHVEIDSKALVNFIKNDTGKFSLLGVVLCEIKNQMLNIQMKSFSHIP
         N +G+G +I+NS   +V   +  +  R+   E EA ALL G+    R  +S+   E DS  LVN I + +   S  G ++ +IKN++  +     SH+ 
Subjt:  SNMVGIGAVIKNSYEDLVVTAADCILSRVAALEGEALALLFGLKLVQRMGISLIHVEIDSKALVNFIKNDTGKFSLLGVVLCEIKNQMLNIQMKSFSHIP

Query:  RLCNNVAHELFRWAWDNEGSDEW
        R  N  AH L + A + +    W
Subjt:  RLCNNVAHELFRWAWDNEGSDEW

A0A803NI87 Uncharacterized protein3.7e-1830.41Show/hide
Query:  WALWADRNSQVHHLPIVETSVRVAWVASYFNEFCTANFLGTRLHPSSRVVVSTSMEGPSIWLPPQAGEFKLNTDVACHPESNMVGIGAVIKNSYEDLVVT
        W LW DRN+ +H  P++  S   A  A+Y+  F   + +       +  ++ST     S W+ P   E K+N D AC    N +G+G +++NS   +V  
Subjt:  WALWADRNSQVHHLPIVETSVRVAWVASYFNEFCTANFLGTRLHPSSRVVVSTSMEGPSIWLPPQAGEFKLNTDVACHPESNMVGIGAVIKNSYEDLVVT

Query:  AADCILSRVAALEGEALALLFGLKLVQRMGISLIHVEIDSKALVNFIKNDTGKFSLLGVVLCEIKNQMLNIQMKSFSHIPRLCNNVAHELFRWA
         +     R  + E EA ALL GL       + +  +E DS  LVN I + +   S  G ++ +IKN++  +     SH+ R  N  AH L + A
Subjt:  AADCILSRVAALEGEALALLFGLKLVQRMGISLIHVEIDSKALVNFIKNDTGKFSLLGVVLCEIKNQMLNIQMKSFSHIPRLCNNVAHELFRWA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G09490.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.7e-0831.01Show/hide
Query:  LPPQAGEFKLNTDVACHPESNMVGIGAVIKNSYEDLVVTAADCILSRVAALEGEALALLFGLKLVQRMGISLIHVEIDSKALVNFIKNDTGKFSLLGVVL
        L P      + TD A   E+  VG G VI+N  E   +       +    L  EA+AL   L+  Q +GI+ + +  DS+ L+  I +++      G++ 
Subjt:  LPPQAGEFKLNTDVACHPESNMVGIGAVIKNSYEDLVVTAADCILSRVAALEGEALALLFGLKLVQRMGISLIHVEIDSKALVNFIKNDTGKFSLLGVVL

Query:  CEIKNQMLNIQMKSFSHIPRLCNNVAHEL
         +I N  L     SFS +PR  N VA EL
Subjt:  CEIKNQMLNIQMKSFSHIPRLCNNVAHEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGGGGTGGATAGAAGAGTTGCAATACAAGATGTGATGTGTGCTTCAATCTTGGGGGACGCTTCCAAAGTTGTACTTTTCAGCGTGGGGTGTTGGGCACTGTGGGC
TGACCGCAACAGTCAAGTTCATCATCTCCCAATTGTCGAGACCTCGGTGCGTGTGGCGTGGGTAGCCTCCTACTTCAATGAATTTTGCACTGCCAACTTTTTGGGAACCC
GTCTTCATCCGAGTTCGAGGGTGGTGGTTTCTACTTCGATGGAAGGTCCATCTATCTGGCTTCCTCCGCAGGCGGGTGAGTTTAAGCTCAATACCGATGTCGCGTGCCAC
CCAGAGTCTAACATGGTGGGGATTGGGGCTGTGATTAAGAATTCTTACGAAGATTTGGTGGTTACTGCAGCGGATTGCATCCTGAGTAGAGTTGCAGCGTTGGAGGGGGA
GGCTCTTGCTCTTCTCTTTGGGTTAAAGCTCGTCCAACGGATGGGCATCTCTCTTATTCACGTGGAGATTGACTCCAAGGCTTTGGTCAATTTCATCAAGAATGATACTG
GAAAGTTCTCTTTGTTGGGGGTTGTTTTGTGTGAAATTAAGAATCAGATGTTAAATATCCAAATGAAGAGTTTTTCTCATATCCCTAGATTATGTAACAATGTTGCTCAT
GAACTATTTAGGTGGGCATGGGATAACGAGGGAAGTGATGAGTGGTCTGTTAGCCCTCTCAGATGGCTTTGTCCTTTATTATTTTCAGATGGCTCTCGTTGTAATTCTGT
TTTAAATCATTTGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGGGGGTGGATAGAAGAGTTGCAATACAAGATGTGATGTGTGCTTCAATCTTGGGGGACGCTTCCAAAGTTGTACTTTTCAGCGTGGGGTGTTGGGCACTGTGGGC
TGACCGCAACAGTCAAGTTCATCATCTCCCAATTGTCGAGACCTCGGTGCGTGTGGCGTGGGTAGCCTCCTACTTCAATGAATTTTGCACTGCCAACTTTTTGGGAACCC
GTCTTCATCCGAGTTCGAGGGTGGTGGTTTCTACTTCGATGGAAGGTCCATCTATCTGGCTTCCTCCGCAGGCGGGTGAGTTTAAGCTCAATACCGATGTCGCGTGCCAC
CCAGAGTCTAACATGGTGGGGATTGGGGCTGTGATTAAGAATTCTTACGAAGATTTGGTGGTTACTGCAGCGGATTGCATCCTGAGTAGAGTTGCAGCGTTGGAGGGGGA
GGCTCTTGCTCTTCTCTTTGGGTTAAAGCTCGTCCAACGGATGGGCATCTCTCTTATTCACGTGGAGATTGACTCCAAGGCTTTGGTCAATTTCATCAAGAATGATACTG
GAAAGTTCTCTTTGTTGGGGGTTGTTTTGTGTGAAATTAAGAATCAGATGTTAAATATCCAAATGAAGAGTTTTTCTCATATCCCTAGATTATGTAACAATGTTGCTCAT
GAACTATTTAGGTGGGCATGGGATAACGAGGGAAGTGATGAGTGGTCTGTTAGCCCTCTCAGATGGCTTTGTCCTTTATTATTTTCAGATGGCTCTCGTTGTAATTCTGT
TTTAAATCATTTGTTTTAA
Protein sequenceShow/hide protein sequence
MWGVDRRVAIQDVMCASILGDASKVVLFSVGCWALWADRNSQVHHLPIVETSVRVAWVASYFNEFCTANFLGTRLHPSSRVVVSTSMEGPSIWLPPQAGEFKLNTDVACH
PESNMVGIGAVIKNSYEDLVVTAADCILSRVAALEGEALALLFGLKLVQRMGISLIHVEIDSKALVNFIKNDTGKFSLLGVVLCEIKNQMLNIQMKSFSHIPRLCNNVAH
ELFRWAWDNEGSDEWSVSPLRWLCPLLFSDGSRCNSVLNHLF