; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10021717 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021717
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationChr05:14676530..14677366
RNA-Seq ExpressionHG10021717
SyntenyHG10021717
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142408.1 probable CCR4-associated factor 1 homolog 11 [Momordica charantia]8.4e-14087Show/hide
Query:  MVVHDLNTVNKTIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTD
        MVV DL   +K I+IREVWASNLE EF+LIRDLIDQFPCVSMDTEFPG+VF DP KP++ QN+PSDHYRLLKSNVDALNLIQIGITLSDS GNLPDLGT 
Subjt:  MVVHDLNTVNKTIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTD

Query:  DTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVF
         +RFIWEFNFMDFDVARD+HAPDSIELLRRQGIDF+RNRVEGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVK+LT+RSLP R++EFLGVLRVF
Subjt:  DTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVF

Query:  FGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEV
        FGD VYD+KY+MRFC+SLYGGLDRIAKILNV+RAVGKCHQAGSDSLLTWHAFQKMRDTYFVQN ++KHAGVLYGLEV
Subjt:  FGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEV

XP_022945861.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita moschata]1.8e-13786.43Show/hide
Query:  MVVHDLNTVN-KTIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQ-PSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLG
        MV HDLN  + K+IKIREVWASNLE EFQLIRDLID FPCVSMDTEFPGIVF  PT PFN  N+  SDHY+LLKSNVDALNLIQIGITLSDS GNLPDLG
Subjt:  MVVHDLNTVN-KTIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQ-PSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLG

Query:  TDDTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLR
        TDD+RFIWEFNFMDFD+ARD++APDSI+LLRRQGIDF+RNRVEGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILTQ+SLP+R+DEFLGVLR
Subjt:  TDDTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLR

Query:  VFFGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEVF
        V FGDNVYD+KY+MRFC+SLYGGLDRIAK LNVNRAVGKCHQAGSDSLLTWHAFQKMRDT+FVQNEV+KHAGVLYGLE F
Subjt:  VFFGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEVF

XP_022967098.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita maxima]3.0e-13786.43Show/hide
Query:  MVVHDLNTVN-KTIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQ-PSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLG
        MV HDLN  + K+IKIREVWASNLE EFQLIRDLID FPCVSMDTEFPGIVF  PT PFN  N+  SDHY+LLKSNVDALNLIQIGITLSDS GNLPDLG
Subjt:  MVVHDLNTVN-KTIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQ-PSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLG

Query:  TDDTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLR
        TDD+RFIWEFNFMDFD+ARD++APDSI+LLRRQGIDF+RNRVEGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILTQ+ LP+RVDEFLGVLR
Subjt:  TDDTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLR

Query:  VFFGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEVF
        V FGDNVYD+KY+MRFC+SLYGGLDRIAK LNVNRAVGKCHQAGSDSLLTWHAFQKMRDT+FVQNEV+KHAGVLYGLE F
Subjt:  VFFGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEVF

XP_023541056.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita pepo subsp. pepo]2.3e-13786.12Show/hide
Query:  MVVHDLNTVN-KTIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQ--PSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDL
        MV HDLN  + K+IKIREVWASNLE EFQLIRDLID FPCVSMDTEFPGIVF  PT PFN  N+   SDHY+LLKSNVDALNLIQIGITLSDS GNLPDL
Subjt:  MVVHDLNTVN-KTIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQ--PSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDL

Query:  GTDDTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVL
        GTDD+RFIWEFNFMDFD+ARD++APDSI+LLRRQGIDF+RNRVEGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILTQ+SLP+R+DEFLGVL
Subjt:  GTDDTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVL

Query:  RVFFGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEVF
        RV FGDNVYD+KY+MRFC+SLYGGLDRIAK LNVNRAVGKCHQAGSDSLLTWHAFQKMRDT+FVQNEV+KHAGVLYGLE F
Subjt:  RVFFGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEVF

XP_038877224.1 probable CCR4-associated factor 1 homolog 11 [Benincasa hispida]5.1e-15395.32Show/hide
Query:  MVVHDLNTVNKTIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTD
        MV+HDLN  NK+IKIREVWASNLE EFQLIRDLIDQFPCVSMDTEFPGIVFADP +PFNFQ+QPSDHYRLLKSNVDAL+LIQIGITLSDS GNLPDLGTD
Subjt:  MVVHDLNTVNKTIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTD

Query:  DTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVF
        DTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVKILTQR LPDRVDEFLGVLRVF
Subjt:  DTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVF

Query:  FGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEVF
        FGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNE+QKHAGVLYGLEVF
Subjt:  FGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEVF

TrEMBL top hitse value%identityAlignment
A0A0A0LYC8 Poly(A)-specific ribonuclease3.1e-13282.73Show/hide
Query:  MVVHDLNTVNKTIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTD
        M++HDLNT +K+I+IREVWASNLE EF+LIRDLIDQFPCVSMDTEFPG++F     P    N PS HY+ LKSNVD L+LIQIGITLSDS GNLPDLGT 
Subjt:  MVVHDLNTVNKTIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTD

Query:  DTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVF
        DTRFIWEFNF DFDVARDLHAP+SIELLRRQGIDF+RNR EGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILT + LP  +++FLGV+R+F
Subjt:  DTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVF

Query:  FGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEVF
        FGDNVYDMKYLMRFC+SLYGGLDRIAK +NVNRAVGKCHQAGSDSLLTWHAFQKMRDT+FVQ E+ KHAGVLYGLEVF
Subjt:  FGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEVF

A0A5A7T1W0 Poly(A)-specific ribonuclease5.3e-13281.56Show/hide
Query:  MVVHDLN----TVNKTIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPD
        M++HDLN    +++K I+IREVWASNL+ EF+LI DLID+FPCVSMDTEFPG++F   TKP  F N PS HY+ LKSNVD L+LIQIGITLSDS GNLPD
Subjt:  MVVHDLN----TVNKTIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPD

Query:  LGTDDTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGV
        LGT DTRFIWEFNF DFDVARD HAPDSIELLRRQGIDF RNR EGIDSSRFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVKILTQ+ LP  ++EFLGV
Subjt:  LGTDDTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGV

Query:  LRVFFGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEVF
        +RVFFGDNVYDMKY+MRFC+SLYGGLDRIAK +NVNRAVGKCHQAGSDSLLTWHAFQKMRDT+FV+NE+ KHAGVLYGLEVF
Subjt:  LRVFFGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEVF

A0A6J1CN71 Poly(A)-specific ribonuclease4.1e-14087Show/hide
Query:  MVVHDLNTVNKTIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTD
        MVV DL   +K I+IREVWASNLE EF+LIRDLIDQFPCVSMDTEFPG+VF DP KP++ QN+PSDHYRLLKSNVDALNLIQIGITLSDS GNLPDLGT 
Subjt:  MVVHDLNTVNKTIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTD

Query:  DTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVF
         +RFIWEFNFMDFDVARD+HAPDSIELLRRQGIDF+RNRVEGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVK+LT+RSLP R++EFLGVLRVF
Subjt:  DTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVF

Query:  FGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEV
        FGD VYD+KY+MRFC+SLYGGLDRIAKILNV+RAVGKCHQAGSDSLLTWHAFQKMRDTYFVQN ++KHAGVLYGLEV
Subjt:  FGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEV

A0A6J1G223 Poly(A)-specific ribonuclease8.5e-13886.43Show/hide
Query:  MVVHDLNTVN-KTIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQ-PSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLG
        MV HDLN  + K+IKIREVWASNLE EFQLIRDLID FPCVSMDTEFPGIVF  PT PFN  N+  SDHY+LLKSNVDALNLIQIGITLSDS GNLPDLG
Subjt:  MVVHDLNTVN-KTIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQ-PSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLG

Query:  TDDTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLR
        TDD+RFIWEFNFMDFD+ARD++APDSI+LLRRQGIDF+RNRVEGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILTQ+SLP+R+DEFLGVLR
Subjt:  TDDTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLR

Query:  VFFGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEVF
        V FGDNVYD+KY+MRFC+SLYGGLDRIAK LNVNRAVGKCHQAGSDSLLTWHAFQKMRDT+FVQNEV+KHAGVLYGLE F
Subjt:  VFFGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEVF

A0A6J1HU54 Poly(A)-specific ribonuclease1.4e-13786.43Show/hide
Query:  MVVHDLNTVN-KTIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQ-PSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLG
        MV HDLN  + K+IKIREVWASNLE EFQLIRDLID FPCVSMDTEFPGIVF  PT PFN  N+  SDHY+LLKSNVDALNLIQIGITLSDS GNLPDLG
Subjt:  MVVHDLNTVN-KTIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQ-PSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLG

Query:  TDDTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLR
        TDD+RFIWEFNFMDFD+ARD++APDSI+LLRRQGIDF+RNRVEGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILTQ+ LP+RVDEFLGVLR
Subjt:  TDDTRFIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLR

Query:  VFFGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEVF
        V FGDNVYD+KY+MRFC+SLYGGLDRIAK LNVNRAVGKCHQAGSDSLLTWHAFQKMRDT+FVQNEV+KHAGVLYGLE F
Subjt:  VFFGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEVF

SwissProt top hitse value%identityAlignment
Q9FMS6 Probable CCR4-associated factor 1 homolog 118.8e-10869.12Show/hide
Query:  VNKTIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDL-GTDDTRFIWE
        ++  I IR+VWA NLE EF LIR +++ +P +SMDTEFPG+++         +  P+  Y LLKSNVDAL+LIQ+G+TLSD+ GNLPDL G  + R+IWE
Subjt:  VNKTIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDL-GTDDTRFIWE

Query:  FNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYD
        FNF DFDV RD HAPDSIELLRR GIDF RNR EG++S RFAELMMSSGL+CN+SVSWVTFHSAYDFGYLVKILT+R LP  + EFLG+LR FFGD VYD
Subjt:  FNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYD

Query:  MKYLMRFCES-LYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEVF
        +K++MRFCE  LYGGLDR+A+ L VNRAVGKCHQAGSDSLLTW AFQ+MRD YFV++  +KHAGVLYGLEVF
Subjt:  MKYLMRFCES-LYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEVF

Q9LEU4 Probable CCR4-associated factor 1 homolog 101.8e-7654.51Show/hide
Query:  TIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTRFIWEFNFM
        +I IREVW  NL  EF LIR+++D+F  ++MDTEFPG+V   P   F + N    +YR LK NVD L LIQ+G+T SD +GNLP  GTD    IW+FNF 
Subjt:  TIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTRFIWEFNFM

Query:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL
        +F++  D++A +SIELLR+ GIDF +N  +GID  RF ELMMSSG+V ND++SWVTFH  YDFGYLVK+LT + LP +  +F  +L V+F   VYD+K+L
Subjt:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL

Query:  MRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEV
        M FC  L+GGL+R+A+++ V R VG CHQAGSDSLLT  +F+K+++ YF     +K+ GVLYGL V
Subjt:  MRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEV

Q9LXM2 Probable CCR4-associated factor 1 homolog 91.8e-10869.57Show/hide
Query:  DLNTVNKTIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTR-
        DL     T+  REVWA NLE EF+LI ++ID +P +SMDTEFPG++F    +   F N P D Y LLK+NVDAL+LIQ+G+TLSD +GNLPDLG D  R 
Subjt:  DLNTVNKTIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTR-

Query:  FIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGD
        FIWEFNF DFDVARD HAPDSIELLRRQGIDF RN  +G++S RFAELMMSSGLVCN+ VSWVTFHSAYDFGYL+KILT+R LP  + EF  V+RV FG+
Subjt:  FIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGD

Query:  NVYDMKYLMRFCE-SLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEVF
         VYD+K++M+FCE  L+GGLDR+A+ L VNRAVGKCHQAGSDSLLTWHAFQ+MRD YFVQ+  +KHAGVLYGLEVF
Subjt:  NVYDMKYLMRFCE-SLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEVF

Q9SAI2 Probable CCR4-associated factor 1 homolog 61.2e-7754.31Show/hide
Query:  TIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPF-NFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTRFIWEFNF
        +I+IREVW  NL+ E  LIRD++D FP V+MDTEFPGIV     +P   F++    HY  LK+NV+ L +IQ+G+T S+  GNLP  GT D   IW+FNF
Subjt:  TIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPF-NFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTRFIWEFNF

Query:  MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY
         +FD+  D+ A DSIELL++ GID  +N ++GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT ++LPD   +F  ++ V+F   VYD+K+
Subjt:  MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY

Query:  LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEV
        LM+FC SL+GGL+++A++L V R VG CHQAGSDSLLT   F+K+++ +FV   + K++GVLYGL V
Subjt:  LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEV

Q9SKZ2 Probable CCR4-associated factor 1 homolog 73.0e-7954.68Show/hide
Query:  TIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPF-NFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTRFIWEFNF
        +I+IREVW  NLE E  LIR+++D FP V+MDTEFPGIV     +P   F+     HY  LK+NV+ L +IQ+G+T SD  GNLP  GTD+   IW+FNF
Subjt:  TIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPF-NFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTRFIWEFNF

Query:  MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY
         +FD+  D++A DSIELLR+ GIDF +N   GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT ++LP+    F  ++ V+F   VYD+K+
Subjt:  MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY

Query:  LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEV
        LM+FC SL+GGL+++A++L+V R VG CHQAGSDSLLT   F+K+++ +F+   ++K++GVLYGL V
Subjt:  LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEV

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.8e-7954.31Show/hide
Query:  TIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPF-NFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTRFIWEFNF
        +I+IREVW  NL+ E  LIRD++D FP V+MDTEFPGIV     +P   F++    HY  LK+NV+ L +IQ+G+T S+  GNLP  GT D   IW+FNF
Subjt:  TIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPF-NFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTRFIWEFNF

Query:  MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY
         +FD+  D+ A DSIELL++ GID  +N ++GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT ++LPD   +F  ++ V+F   VYD+K+
Subjt:  MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY

Query:  LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEV
        LM+FC SL+GGL+++A++L V R VG CHQAGSDSLLT   F+K+++ +FV   + K++GVLYGL V
Subjt:  LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEV

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.8e-7954.31Show/hide
Query:  TIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPF-NFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTRFIWEFNF
        +I+IREVW  NL+ E  LIRD++D FP V+MDTEFPGIV     +P   F++    HY  LK+NV+ L +IQ+G+T S+  GNLP  GT D   IW+FNF
Subjt:  TIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPF-NFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTRFIWEFNF

Query:  MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY
         +FD+  D+ A DSIELL++ GID  +N ++GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT ++LPD   +F  ++ V+F   VYD+K+
Subjt:  MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY

Query:  LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEV
        LM+FC SL+GGL+++A++L V R VG CHQAGSDSLLT   F+K+++ +FV   + K++GVLYGL V
Subjt:  LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEV

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.1e-8054.68Show/hide
Query:  TIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPF-NFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTRFIWEFNF
        +I+IREVW  NLE E  LIR+++D FP V+MDTEFPGIV     +P   F+     HY  LK+NV+ L +IQ+G+T SD  GNLP  GTD+   IW+FNF
Subjt:  TIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPF-NFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTRFIWEFNF

Query:  MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY
         +FD+  D++A DSIELLR+ GIDF +N   GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT ++LP+    F  ++ V+F   VYD+K+
Subjt:  MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY

Query:  LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEV
        LM+FC SL+GGL+++A++L+V R VG CHQAGSDSLLT   F+K+++ +F+   ++K++GVLYGL V
Subjt:  LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEV

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.3e-10969.57Show/hide
Query:  DLNTVNKTIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTR-
        DL     T+  REVWA NLE EF+LI ++ID +P +SMDTEFPG++F    +   F N P D Y LLK+NVDAL+LIQ+G+TLSD +GNLPDLG D  R 
Subjt:  DLNTVNKTIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTR-

Query:  FIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGD
        FIWEFNF DFDVARD HAPDSIELLRRQGIDF RN  +G++S RFAELMMSSGLVCN+ VSWVTFHSAYDFGYL+KILT+R LP  + EF  V+RV FG+
Subjt:  FIWEFNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGD

Query:  NVYDMKYLMRFCE-SLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEVF
         VYD+K++M+FCE  L+GGLDR+A+ L VNRAVGKCHQAGSDSLLTWHAFQ+MRD YFVQ+  +KHAGVLYGLEVF
Subjt:  NVYDMKYLMRFCE-SLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEVF

AT5G22250.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.3e-10969.12Show/hide
Query:  VNKTIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDL-GTDDTRFIWE
        ++  I IR+VWA NLE EF LIR +++ +P +SMDTEFPG+++         +  P+  Y LLKSNVDAL+LIQ+G+TLSD+ GNLPDL G  + R+IWE
Subjt:  VNKTIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDL-GTDDTRFIWE

Query:  FNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYD
        FNF DFDV RD HAPDSIELLRR GIDF RNR EG++S RFAELMMSSGL+CN+SVSWVTFHSAYDFGYLVKILT+R LP  + EFLG+LR FFGD VYD
Subjt:  FNFMDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYD

Query:  MKYLMRFCES-LYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEVF
        +K++MRFCE  LYGGLDR+A+ L VNRAVGKCHQAGSDSLLTW AFQ+MRD YFV++  +KHAGVLYGLEVF
Subjt:  MKYLMRFCES-LYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGTCCACGATCTGAACACCGTGAATAAAACCATTAAAATCCGTGAAGTTTGGGCTTCCAATCTCGAATTCGAATTCCAGTTGATCCGTGATCTCATCGATCAATT
CCCTTGCGTTTCAATGGACACGGAGTTTCCCGGAATTGTTTTCGCCGATCCCACCAAACCCTTCAACTTTCAAAATCAGCCCTCTGATCACTACAGACTCCTCAAATCCA
ACGTCGACGCCCTCAATCTCATCCAGATCGGAATCACTCTCTCTGATTCCCACGGCAACTTGCCGGATCTCGGCACCGACGACACCCGATTCATCTGGGAATTCAATTTC
ATGGACTTCGACGTGGCGCGTGACCTCCACGCTCCCGATTCCATCGAGCTTCTCCGCCGCCAGGGCATCGACTTCAACCGGAATCGGGTGGAAGGGATCGACTCGTCCCG
CTTCGCCGAGTTGATGATGTCATCCGGACTCGTTTGTAACGACTCAGTGAGTTGGGTGACGTTTCACAGCGCCTACGATTTTGGGTATTTGGTTAAGATTTTGACTCAGC
GAAGCCTTCCAGATCGGGTAGACGAATTCCTCGGCGTTCTTAGGGTTTTCTTCGGCGATAACGTGTACGATATGAAGTACTTGATGCGGTTCTGTGAGAGTCTCTACGGC
GGTTTGGACCGGATTGCCAAGATTCTGAACGTGAACCGGGCGGTTGGAAAGTGCCATCAGGCCGGGTCTGATAGCTTGTTGACGTGGCATGCGTTTCAGAAGATGAGAGA
TACTTATTTTGTACAGAATGAGGTGCAGAAACATGCTGGGGTACTCTATGGATTAGAGGTCTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGTCCACGATCTGAACACCGTGAATAAAACCATTAAAATCCGTGAAGTTTGGGCTTCCAATCTCGAATTCGAATTCCAGTTGATCCGTGATCTCATCGATCAATT
CCCTTGCGTTTCAATGGACACGGAGTTTCCCGGAATTGTTTTCGCCGATCCCACCAAACCCTTCAACTTTCAAAATCAGCCCTCTGATCACTACAGACTCCTCAAATCCA
ACGTCGACGCCCTCAATCTCATCCAGATCGGAATCACTCTCTCTGATTCCCACGGCAACTTGCCGGATCTCGGCACCGACGACACCCGATTCATCTGGGAATTCAATTTC
ATGGACTTCGACGTGGCGCGTGACCTCCACGCTCCCGATTCCATCGAGCTTCTCCGCCGCCAGGGCATCGACTTCAACCGGAATCGGGTGGAAGGGATCGACTCGTCCCG
CTTCGCCGAGTTGATGATGTCATCCGGACTCGTTTGTAACGACTCAGTGAGTTGGGTGACGTTTCACAGCGCCTACGATTTTGGGTATTTGGTTAAGATTTTGACTCAGC
GAAGCCTTCCAGATCGGGTAGACGAATTCCTCGGCGTTCTTAGGGTTTTCTTCGGCGATAACGTGTACGATATGAAGTACTTGATGCGGTTCTGTGAGAGTCTCTACGGC
GGTTTGGACCGGATTGCCAAGATTCTGAACGTGAACCGGGCGGTTGGAAAGTGCCATCAGGCCGGGTCTGATAGCTTGTTGACGTGGCATGCGTTTCAGAAGATGAGAGA
TACTTATTTTGTACAGAATGAGGTGCAGAAACATGCTGGGGTACTCTATGGATTAGAGGTCTTCTAA
Protein sequenceShow/hide protein sequence
MVVHDLNTVNKTIKIREVWASNLEFEFQLIRDLIDQFPCVSMDTEFPGIVFADPTKPFNFQNQPSDHYRLLKSNVDALNLIQIGITLSDSHGNLPDLGTDDTRFIWEFNF
MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYLMRFCESLYG
GLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEVF