; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10021719 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021719
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr05:14753960..14754520
RNA-Seq ExpressionHG10021719
SyntenyHG10021719
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036886.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]9.9e-4453.76Show/hide
Query:  MQSFQVFWAIVFVLPVGVSQEVDRILWAYLWRGRLERKCGMRVVWDEVYLSKVEGGLGIRHFVTWNVAVILKLFWLLLVWSG-LQVAWMEEYVLRGQSLW
        ++S QV+WA VFVLP  V  EVD+IL +YLW+G+ E + G++V W +V L   EGGLGIR   +WN+A  LK+ WL+L  SG L VAWME Y+L+G+SLW
Subjt:  MQSFQVFWAIVFVLPVGVSQEVDRILWAYLWRGRLERKCGMRVVWDEVYLSKVEGGLGIRHFVTWNVAVILKLFWLLLVWSG-LQVAWMEEYVLRGQSLW

Query:  SVRVGARMSWCLRVILRWGTICCLFIRLEVGDGKGCFVWLDPWLSGGPILSRCGERVIYNVAREREARLSDFL
         V      SWC R ILR        +R++VG+G  C VWLDPWL GG IL + GERV+Y+ A  REARLSDF+
Subjt:  SVRVGARMSWCLRVILRWGTICCLFIRLEVGDGKGCFVWLDPWLSGGPILSRCGERVIYNVAREREARLSDFL

KAA0059752.1 F17F8.5 [Cucumis melo var. makuwa]3.1e-3748.66Show/hide
Query:  MQSFQVFWAIVFVLPVGVSQEVDRILWAYLWRGRLERKCGMRVVWDEVYLSKVEGGLGIRHFVTWNVAVILKLFWLLLVWSG-LQVAWMEEYVLRGQSLW
        ++S QV+WA VFVLP  V  EVD+IL +YLWRG+ E + G++V W +V L   E GLGIR   +WN+A  LK+  L+L  SG L VAW++ Y+L+G+SLW
Subjt:  MQSFQVFWAIVFVLPVGVSQEVDRILWAYLWRGRLERKCGMRVVWDEVYLSKVEGGLGIRHFVTWNVAVILKLFWLLLVWSG-LQVAWMEEYVLRGQSLW

Query:  SVRVGARMSWCLRVILRWGTICCLFIRLEVGDGKGCFVWLDPWLSGGPILSRCGERVIYNVAREREARLSDFLRMDIGTDLVSRGSY
         V      SW LR ILR        + ++VG+   C VWLD WL G  IL + GERV+Y+ A  REARLSDF+  D G  L  RG +
Subjt:  SVRVGARMSWCLRVILRWGTICCLFIRLEVGDGKGCFVWLDPWLSGGPILSRCGERVIYNVAREREARLSDFLRMDIGTDLVSRGSY

KAA0062318.1 uncharacterized protein E6C27_scaffold154G00690 [Cucumis melo var. makuwa]1.4e-4252.84Show/hide
Query:  MQSFQVFWAIVFVLPVGVSQEVDRILWAYLWRGRLERKCGMRVVWDEVYLSKVEGGLGIRHFVTWNVAVILKLFWLLLVWSG-LQVAWMEEYVLRGQSLW
        ++SFQV+WA VFVLP  V  EVD+IL +YLWRG+ E + G++V W +V L   EGGLGIR   +WN+A  LK+ WL+L  SG L VAW+E Y+L+G+SLW
Subjt:  MQSFQVFWAIVFVLPVGVSQEVDRILWAYLWRGRLERKCGMRVVWDEVYLSKVEGGLGIRHFVTWNVAVILKLFWLLLVWSG-LQVAWMEEYVLRGQSLW

Query:  SVRVGARMSWCLRVILRWGTICCLFIRLEVGDGKGCFVWLDPWLSGGPILSRCGERVIYNVAREREARLSDFLRMD
         V      SWCLR ILR        +R++VG+G    VWLDPWL  G IL + GERV+Y+ A  R+ARLSDF+  D
Subjt:  SVRVGARMSWCLRVILRWGTICCLFIRLEVGDGKGCFVWLDPWLSGGPILSRCGERVIYNVAREREARLSDFLRMD

TYJ96685.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]9.9e-4453.76Show/hide
Query:  MQSFQVFWAIVFVLPVGVSQEVDRILWAYLWRGRLERKCGMRVVWDEVYLSKVEGGLGIRHFVTWNVAVILKLFWLLLVWSG-LQVAWMEEYVLRGQSLW
        ++S QV+WA VFVLP  V  EVD+IL +YLW+G+ E + G++V W +V L   EGGLGIR   +WN+A  LK+ WL+L  SG L VAWME Y+L+G+SLW
Subjt:  MQSFQVFWAIVFVLPVGVSQEVDRILWAYLWRGRLERKCGMRVVWDEVYLSKVEGGLGIRHFVTWNVAVILKLFWLLLVWSG-LQVAWMEEYVLRGQSLW

Query:  SVRVGARMSWCLRVILRWGTICCLFIRLEVGDGKGCFVWLDPWLSGGPILSRCGERVIYNVAREREARLSDFL
         V      SWC R ILR        +R++VG+G  C VWLDPWL GG IL + GERV+Y+ A  REARLSDF+
Subjt:  SVRVGARMSWCLRVILRWGTICCLFIRLEVGDGKGCFVWLDPWLSGGPILSRCGERVIYNVAREREARLSDFL

XP_031740402.1 uncharacterized protein LOC116403409 [Cucumis sativus]1.4e-4251.7Show/hide
Query:  MQSFQVFWAIVFVLPVGVSQEVDRILWAYLWRGRLERKCGMRVVWDEVYLSKVEGGLGIRHFVTWNVAVILKLFWLLLVWSG-LQVAWMEEYVLRGQSLW
        ++S QV+WA VF+LP+ V ++VD+IL AYLWRG  E + G +V WDEV L   EGGL IR   +WN+A  LK+ WLLLV SG L VAW+E Y+L+G+SL 
Subjt:  MQSFQVFWAIVFVLPVGVSQEVDRILWAYLWRGRLERKCGMRVVWDEVYLSKVEGGLGIRHFVTWNVAVILKLFWLLLVWSG-LQVAWMEEYVLRGQSLW

Query:  SVRVGARMSWCLRVILRWGTICCLFIRLEVGDGKGCFVWLDPWLSGGPILSRCGERVIYNVAREREARLSDFLRMD
         +  G   SWC R ILR   I    +++EVG+G+ C VWL PW+ GGPI+ + GERVIY+     +ARL DF+  D
Subjt:  SVRVGARMSWCLRVILRWGTICCLFIRLEVGDGKGCFVWLDPWLSGGPILSRCGERVIYNVAREREARLSDFLRMD

TrEMBL top hitse value%identityAlignment
A0A5A7T440 Zf-RVT domain-containing protein4.8e-4453.76Show/hide
Query:  MQSFQVFWAIVFVLPVGVSQEVDRILWAYLWRGRLERKCGMRVVWDEVYLSKVEGGLGIRHFVTWNVAVILKLFWLLLVWSG-LQVAWMEEYVLRGQSLW
        ++S QV+WA VFVLP  V  EVD+IL +YLW+G+ E + G++V W +V L   EGGLGIR   +WN+A  LK+ WL+L  SG L VAWME Y+L+G+SLW
Subjt:  MQSFQVFWAIVFVLPVGVSQEVDRILWAYLWRGRLERKCGMRVVWDEVYLSKVEGGLGIRHFVTWNVAVILKLFWLLLVWSG-LQVAWMEEYVLRGQSLW

Query:  SVRVGARMSWCLRVILRWGTICCLFIRLEVGDGKGCFVWLDPWLSGGPILSRCGERVIYNVAREREARLSDFL
         V      SWC R ILR        +R++VG+G  C VWLDPWL GG IL + GERV+Y+ A  REARLSDF+
Subjt:  SVRVGARMSWCLRVILRWGTICCLFIRLEVGDGKGCFVWLDPWLSGGPILSRCGERVIYNVAREREARLSDFL

A0A5A7TWG5 Reverse transcriptase domain-containing protein3.1e-3552.63Show/hide
Query:  MQSFQVFWAIVFVLPVGVSQEVDRILWAYLWRGRLERKCGMRVVWDEVYLSKVEGGLGIRHFVTWNVAVILKLFWLLLVWSG-LQVAWMEEYVLRGQSLW
        ++S QV+WA VFVLP  V  EVD+IL +YLWRG+ E + G++V W +V L   EGGLGIR   +WN+A  LK+ WL+L  SG L VAW+E Y+L+ +SLW
Subjt:  MQSFQVFWAIVFVLPVGVSQEVDRILWAYLWRGRLERKCGMRVVWDEVYLSKVEGGLGIRHFVTWNVAVILKLFWLLLVWSG-LQVAWMEEYVLRGQSLW

Query:  SVRVGARMSWCLRVILRWGTICCLFIRLEVGDGKGCFVWLDPWLSGGPILSR
         V      SWCLR ILR        +R++VG+G  C VWLDPWL GG IL R
Subjt:  SVRVGARMSWCLRVILRWGTICCLFIRLEVGDGKGCFVWLDPWLSGGPILSR

A0A5A7UV01 F17F8.51.5e-3748.66Show/hide
Query:  MQSFQVFWAIVFVLPVGVSQEVDRILWAYLWRGRLERKCGMRVVWDEVYLSKVEGGLGIRHFVTWNVAVILKLFWLLLVWSG-LQVAWMEEYVLRGQSLW
        ++S QV+WA VFVLP  V  EVD+IL +YLWRG+ E + G++V W +V L   E GLGIR   +WN+A  LK+  L+L  SG L VAW++ Y+L+G+SLW
Subjt:  MQSFQVFWAIVFVLPVGVSQEVDRILWAYLWRGRLERKCGMRVVWDEVYLSKVEGGLGIRHFVTWNVAVILKLFWLLLVWSG-LQVAWMEEYVLRGQSLW

Query:  SVRVGARMSWCLRVILRWGTICCLFIRLEVGDGKGCFVWLDPWLSGGPILSRCGERVIYNVAREREARLSDFLRMDIGTDLVSRGSY
         V      SW LR ILR        + ++VG+   C VWLD WL G  IL + GERV+Y+ A  REARLSDF+  D G  L  RG +
Subjt:  SVRVGARMSWCLRVILRWGTICCLFIRLEVGDGKGCFVWLDPWLSGGPILSRCGERVIYNVAREREARLSDFLRMDIGTDLVSRGSY

A0A5A7V3Z0 Reverse transcriptase domain-containing protein6.9e-4352.84Show/hide
Query:  MQSFQVFWAIVFVLPVGVSQEVDRILWAYLWRGRLERKCGMRVVWDEVYLSKVEGGLGIRHFVTWNVAVILKLFWLLLVWSG-LQVAWMEEYVLRGQSLW
        ++SFQV+WA VFVLP  V  EVD+IL +YLWRG+ E + G++V W +V L   EGGLGIR   +WN+A  LK+ WL+L  SG L VAW+E Y+L+G+SLW
Subjt:  MQSFQVFWAIVFVLPVGVSQEVDRILWAYLWRGRLERKCGMRVVWDEVYLSKVEGGLGIRHFVTWNVAVILKLFWLLLVWSG-LQVAWMEEYVLRGQSLW

Query:  SVRVGARMSWCLRVILRWGTICCLFIRLEVGDGKGCFVWLDPWLSGGPILSRCGERVIYNVAREREARLSDFLRMD
         V      SWCLR ILR        +R++VG+G    VWLDPWL  G IL + GERV+Y+ A  R+ARLSDF+  D
Subjt:  SVRVGARMSWCLRVILRWGTICCLFIRLEVGDGKGCFVWLDPWLSGGPILSRCGERVIYNVAREREARLSDFLRMD

A0A5D3BDZ6 Zf-RVT domain-containing protein4.8e-4453.76Show/hide
Query:  MQSFQVFWAIVFVLPVGVSQEVDRILWAYLWRGRLERKCGMRVVWDEVYLSKVEGGLGIRHFVTWNVAVILKLFWLLLVWSG-LQVAWMEEYVLRGQSLW
        ++S QV+WA VFVLP  V  EVD+IL +YLW+G+ E + G++V W +V L   EGGLGIR   +WN+A  LK+ WL+L  SG L VAWME Y+L+G+SLW
Subjt:  MQSFQVFWAIVFVLPVGVSQEVDRILWAYLWRGRLERKCGMRVVWDEVYLSKVEGGLGIRHFVTWNVAVILKLFWLLLVWSG-LQVAWMEEYVLRGQSLW

Query:  SVRVGARMSWCLRVILRWGTICCLFIRLEVGDGKGCFVWLDPWLSGGPILSRCGERVIYNVAREREARLSDFL
         V      SWC R ILR        +R++VG+G  C VWLDPWL GG IL + GERV+Y+ A  REARLSDF+
Subjt:  SVRVGARMSWCLRVILRWGTICCLFIRLEVGDGKGCFVWLDPWLSGGPILSRCGERVIYNVAREREARLSDFL

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657504.5e-0727.27Show/hide
Query:  MQSFQVFWAIVFVLPVGVSQEVDRILWAYLWRGRLERKCGMRVVWDEVYLSKVEGGLGIRHFVTWNVAVILKLFWLLL-----VWSGLQVAWMEEYVLRG
        + S  V      +LP  +   +D++   +LW    E+K    V W +V   K EGGLG+R   + N A+I K+ W LL     +W+ +         +R 
Subjt:  MQSFQVFWAIVFVLPVGVSQEVDRILWAYLWRGRLERKCGMRVVWDEVYLSKVEGGLGIRHFVTWNVAVILKLFWLLL-----VWSGLQVAWMEEYVLRG

Query:  QSLWSVRVGARMSWCLRVILRWGTICCLFIRLEVGDGKGCFVWLDPWLSGGPIL
         S W +  G+  S    + +    +    +    GDG+    W D W+SG P+L
Subjt:  QSLWSVRVGARMSWCLRVILRWGTICCLFIRLEVGDGKGCFVWLDPWLSGGPIL

Arabidopsis top hitse value%identityAlignment
AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.4e-0825Show/hide
Query:  MQSFQVFWAIVFVLPVGVSQEVDRILWAYLWRGRLERKCGMRVVWDEVYLSKVEGGLGIRHFVTWNVAVILKLFWLLLVWSGLQVAWMEEYVLRGQSLWS
        + S   FW   F LP    +E+D I  ++LW G        +V W +V   K EGGLGIR     N                              S WS
Subjt:  MQSFQVFWAIVFVLPVGVSQEVDRILWAYLWRGRLERKCGMRVVWDEVYLSKVEGGLGIRHFVTWNVAVILKLFWLLLVWSGLQVAWMEEYVLRGQSLWS

Query:  VRVGARM-SWCLRVILRWGTICCLFIRLEVGDGKGCFVWLDPWLSGGPILSRCGER
        +     + SW  + IL+   +   F++ ++ +G     W D W   G ++   G R
Subjt:  VRVGARM-SWCLRVILRWGTICCLFIRLEVGDGKGCFVWLDPWLSGGPILSRCGER

AT3G25720.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.0e-1034.51Show/hide
Query:  VYLSKVEGGLGIRHFVTWNVAVILKLFWLLLVWSG-LQVAWMEEYVLRG------QSLWSVRVGARMSWCLRVILRWGTICCLFIRLEVGDGKGCFVWLD
        V L K EGGLG+R F  WN  + LKL W L    G L V W   + L+G         W+ +     SW  + +LR   +   F+R  +G+G     W D
Subjt:  VYLSKVEGGLGIRHFVTWNVAVILKLFWLLLVWSG-LQVAWMEEYVLRG------QSLWSVRVGARMSWCLRVILRWGTICCLFIRLEVGDGKGCFVWLD

Query:  PWLSGGPILSRCG
         W   GP+L   G
Subjt:  PWLSGGPILSRCG

AT4G29090.1 Ribonuclease H-like superfamily protein9.3e-0826.81Show/hide
Query:  FVLPVGVSQEVDRILWAYLWRGRLERKCGMRVVWDEVYLSKVEGGLGIRHFVTWNVAVILKLFWLLL--VWSGLQVAWMEEYVLRGQSLWSVRVGARMSW
        F+LP  V +++  +L  + WR + E K      WD +   K EGG+G +    +N+A++ K  W +L    S +   +   Y  +   L +  +G+R S+
Subjt:  FVLPVGVSQEVDRILWAYLWRGRLERKCGMRVVWDEVYLSKVEGGLGIRHFVTWNVAVILKLFWLLL--VWSGLQVAWMEEYVLRGQSLWSVRVGARMSW

Query:  CLRVILRWGTICCLFIRLEVGDGKGCFVWLDPWLSGGP
          + I     I     R  VG+G+   +W   WL   P
Subjt:  CLRVILRWGTICCLFIRLEVGDGKGCFVWLDPWLSGGP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGTTTTCAGGTCTTTTGGGCCATTGTTTTTGTGTTGCCTGTTGGGGTTTCTCAGGAAGTAGATCGTATTCTATGGGCTTATTTGTGGAGAGGTAGGCTGGAGAG
GAAGTGTGGGATGAGGGTGGTGTGGGATGAGGTTTATTTGTCGAAGGTTGAAGGGGGGTTGGGGATTCGTCATTTTGTGACTTGGAACGTGGCTGTTATTTTGAAGTTGT
TTTGGTTGCTGTTGGTGTGGTCTGGTTTGCAGGTGGCGTGGATGGAGGAATATGTTTTGAGAGGTCAGTCACTCTGGTCCGTTAGGGTGGGTGCTAGGATGTCTTGGTGT
TTGAGGGTCATTCTTCGTTGGGGGACTATTTGCTGCCTTTTCATTCGGTTGGAGGTGGGGGATGGTAAGGGTTGTTTTGTTTGGCTTGATCCTTGGCTGTCGGGTGGTCC
TATTTTGTCTCGCTGTGGTGAAAGGGTGATATATAATGTTGCACGTGAGAGGGAGGCTCGTCTGTCAGATTTTCTGAGGATGGATATTGGCACTGACCTTGTATCTCGTG
GGAGTTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAAGTTTTCAGGTCTTTTGGGCCATTGTTTTTGTGTTGCCTGTTGGGGTTTCTCAGGAAGTAGATCGTATTCTATGGGCTTATTTGTGGAGAGGTAGGCTGGAGAG
GAAGTGTGGGATGAGGGTGGTGTGGGATGAGGTTTATTTGTCGAAGGTTGAAGGGGGGTTGGGGATTCGTCATTTTGTGACTTGGAACGTGGCTGTTATTTTGAAGTTGT
TTTGGTTGCTGTTGGTGTGGTCTGGTTTGCAGGTGGCGTGGATGGAGGAATATGTTTTGAGAGGTCAGTCACTCTGGTCCGTTAGGGTGGGTGCTAGGATGTCTTGGTGT
TTGAGGGTCATTCTTCGTTGGGGGACTATTTGCTGCCTTTTCATTCGGTTGGAGGTGGGGGATGGTAAGGGTTGTTTTGTTTGGCTTGATCCTTGGCTGTCGGGTGGTCC
TATTTTGTCTCGCTGTGGTGAAAGGGTGATATATAATGTTGCACGTGAGAGGGAGGCTCGTCTGTCAGATTTTCTGAGGATGGATATTGGCACTGACCTTGTATCTCGTG
GGAGTTACTAG
Protein sequenceShow/hide protein sequence
MQSFQVFWAIVFVLPVGVSQEVDRILWAYLWRGRLERKCGMRVVWDEVYLSKVEGGLGIRHFVTWNVAVILKLFWLLLVWSGLQVAWMEEYVLRGQSLWSVRVGARMSWC
LRVILRWGTICCLFIRLEVGDGKGCFVWLDPWLSGGPILSRCGERVIYNVAREREARLSDFLRMDIGTDLVSRGSY