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HG10021728 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021728
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionphotosystem I subunit O
Genome locationChr05:15233715..15234230
RNA-Seq ExpressionHG10021728
SyntenyHG10021728
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR017498 - Photosystem I PsaO


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139499.1 photosystem I subunit O [Cucumis sativus]1.5e-5090.52Show/hide
Query:  MATAFATSSSVVGLGTSSLSSPSSRSPRLVSGFVRSPVAARNPLAMAHASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA
        MATAFAT SSV GLGT+SLSSPSSRSPRLVSGF++ PVAARNPL++A ASGG+FTCFERDWLRRDLNVIGFGLIGWIAPSSIPVI GKSLTGLFFESIGA
Subjt:  MATAFATSSSVVGLGTSSLSSPSSRSPRLVSGFVRSPVAARNPLAMAHASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA

Query:  ELAHFPSPPALTSQFW
        ELAHFPSPPALTSQFW
Subjt:  ELAHFPSPPALTSQFW

XP_008463649.1 PREDICTED: photosystem I subunit O [Cucumis melo]1.3e-4989.66Show/hide
Query:  MATAFATSSSVVGLGTSSLSSPSSRSPRLVSGFVRSPVAARNPLAMAHASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA
        MATAFAT SSV GLGT+SLSSPSSRSPRLVSGF++SPVAARNPL +  AS GRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIG 
Subjt:  MATAFATSSSVVGLGTSSLSSPSSRSPRLVSGFVRSPVAARNPLAMAHASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA

Query:  ELAHFPSPPALTSQFW
        ELAHFPSPPALTSQFW
Subjt:  ELAHFPSPPALTSQFW

XP_022142590.1 photosystem I subunit O [Momordica charantia]5.8e-5088.89Show/hide
Query:  MATAFATSSSVVGLG-TSSLSSPSSRSPRLVSGFVRSPVAARNPLAMAHASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIG
        MATAFATSS++VGLG +SSLSSPSSRSPRL S FV+SP AARNPL++A ASGGRFTCFERDWLRRDLNVIGFGLIGW+APSSIPVI+GKSLTGLFFESIG
Subjt:  MATAFATSSSVVGLG-TSSLSSPSSRSPRLVSGFVRSPVAARNPLAMAHASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIG

Query:  AELAHFPSPPALTSQFW
        AELAHFPSPPALTSQFW
Subjt:  AELAHFPSPPALTSQFW

XP_022973174.1 photosystem I subunit O [Cucurbita maxima]5.2e-5188.79Show/hide
Query:  MATAFATSSSVVGLGTSSLSSPSSRSPRLVSGFVRSPVAARNPLAMAHASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA
        MA+AFATSSSVVGLG+SSLSSPSSRSPRLVSGF++ PV ARNP  +A + GGRFTCF+RDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA
Subjt:  MATAFATSSSVVGLGTSSLSSPSSRSPRLVSGFVRSPVAARNPLAMAHASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA

Query:  ELAHFPSPPALTSQFW
        ELAHFPSPPALTSQFW
Subjt:  ELAHFPSPPALTSQFW

XP_038895620.1 photosystem I subunit O [Benincasa hispida]7.3e-5393.1Show/hide
Query:  MATAFATSSSVVGLGTSSLSSPSSRSPRLVSGFVRSPVAARNPLAMAHASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA
        MATAFATSSSVVGLGT+SLSSPSSRSPRLVSGFV+ PV ARNP A+A ASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIGA
Subjt:  MATAFATSSSVVGLGTSSLSSPSSRSPRLVSGFVRSPVAARNPLAMAHASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA

Query:  ELAHFPSPPALTSQFW
        ELAHFPSPPALTSQFW
Subjt:  ELAHFPSPPALTSQFW

TrEMBL top hitse value%identityAlignment
A0A0A0LT61 Uncharacterized protein7.3e-5190.52Show/hide
Query:  MATAFATSSSVVGLGTSSLSSPSSRSPRLVSGFVRSPVAARNPLAMAHASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA
        MATAFAT SSV GLGT+SLSSPSSRSPRLVSGF++ PVAARNPL++A ASGG+FTCFERDWLRRDLNVIGFGLIGWIAPSSIPVI GKSLTGLFFESIGA
Subjt:  MATAFATSSSVVGLGTSSLSSPSSRSPRLVSGFVRSPVAARNPLAMAHASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA

Query:  ELAHFPSPPALTSQFW
        ELAHFPSPPALTSQFW
Subjt:  ELAHFPSPPALTSQFW

A0A1S3CJR4 photosystem I subunit O6.2e-5089.66Show/hide
Query:  MATAFATSSSVVGLGTSSLSSPSSRSPRLVSGFVRSPVAARNPLAMAHASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA
        MATAFAT SSV GLGT+SLSSPSSRSPRLVSGF++SPVAARNPL +  AS GRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIG 
Subjt:  MATAFATSSSVVGLGTSSLSSPSSRSPRLVSGFVRSPVAARNPLAMAHASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA

Query:  ELAHFPSPPALTSQFW
        ELAHFPSPPALTSQFW
Subjt:  ELAHFPSPPALTSQFW

A0A6J1CLD0 photosystem I subunit O2.8e-5088.89Show/hide
Query:  MATAFATSSSVVGLG-TSSLSSPSSRSPRLVSGFVRSPVAARNPLAMAHASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIG
        MATAFATSS++VGLG +SSLSSPSSRSPRL S FV+SP AARNPL++A ASGGRFTCFERDWLRRDLNVIGFGLIGW+APSSIPVI+GKSLTGLFFESIG
Subjt:  MATAFATSSSVVGLG-TSSLSSPSSRSPRLVSGFVRSPVAARNPLAMAHASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIG

Query:  AELAHFPSPPALTSQFW
        AELAHFPSPPALTSQFW
Subjt:  AELAHFPSPPALTSQFW

A0A6J1EID2 photosystem I subunit O9.0e-4986.21Show/hide
Query:  MATAFATSSSVVGLGTSSLSSPSSRSPRLVSGFVRSPVAARNPLAMAHASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA
        MA+AFATSSSVVGLG+SSLSSPSSRSPRLVS FV+ PV ARNP  +  + GGR TCF+RDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIG 
Subjt:  MATAFATSSSVVGLGTSSLSSPSSRSPRLVSGFVRSPVAARNPLAMAHASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA

Query:  ELAHFPSPPALTSQFW
        ELAHFPSPPALTSQFW
Subjt:  ELAHFPSPPALTSQFW

A0A6J1IDS7 photosystem I subunit O2.5e-5188.79Show/hide
Query:  MATAFATSSSVVGLGTSSLSSPSSRSPRLVSGFVRSPVAARNPLAMAHASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA
        MA+AFATSSSVVGLG+SSLSSPSSRSPRLVSGF++ PV ARNP  +A + GGRFTCF+RDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA
Subjt:  MATAFATSSSVVGLGTSSLSSPSSRSPRLVSGFVRSPVAARNPLAMAHASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA

Query:  ELAHFPSPPALTSQFW
        ELAHFPSPPALTSQFW
Subjt:  ELAHFPSPPALTSQFW

SwissProt top hitse value%identityAlignment
Q949Q5 Photosystem I subunit O4.7e-3967.24Show/hide
Query:  MATAFATSSSVVGLGTSSLSSPSSRSPRLVSGFVRSPVAARNPLAMAHASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA
        MA  FAT S+V+GLG SS+++         S F++  ++A+NPL +A ASGGR TCFER+WLRRDLNV+GFGLIGW+APSSIP I+GKSLTGLFF+SIG 
Subjt:  MATAFATSSSVVGLGTSSLSSPSSRSPRLVSGFVRSPVAARNPLAMAHASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA

Query:  ELAHFPSPPALTSQFW
        ELAHFP+PPALTSQFW
Subjt:  ELAHFPSPPALTSQFW

Arabidopsis top hitse value%identityAlignment
AT1G08380.1 photosystem I subunit O3.4e-4067.24Show/hide
Query:  MATAFATSSSVVGLGTSSLSSPSSRSPRLVSGFVRSPVAARNPLAMAHASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA
        MA  FAT S+V+GLG SS+++         S F++  ++A+NPL +A ASGGR TCFER+WLRRDLNV+GFGLIGW+APSSIP I+GKSLTGLFF+SIG 
Subjt:  MATAFATSSSVVGLGTSSLSSPSSRSPRLVSGFVRSPVAARNPLAMAHASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGA

Query:  ELAHFPSPPALTSQFW
        ELAHFP+PPALTSQFW
Subjt:  ELAHFPSPPALTSQFW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACCGCCTTCGCTACTTCATCCTCCGTCGTCGGCCTCGGAACCTCCTCCCTCTCCTCTCCTTCCTCCAGATCTCCGCGTCTCGTCTCCGGGTTCGTCAGGTCGCC
TGTAGCCGCCAGGAATCCGCTTGCCATGGCGCATGCATCCGGCGGTAGGTTCACCTGCTTTGAGAGAGATTGGCTGCGGAGAGATCTGAATGTGATCGGATTTGGACTGA
TCGGGTGGATTGCACCGTCGAGCATTCCGGTGATCGATGGGAAGAGCTTGACGGGGCTCTTCTTTGAGAGCATTGGGGCAGAGCTTGCGCATTTTCCTTCTCCACCCGCT
CTCACTTCTCAGTTCTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACCGCCTTCGCTACTTCATCCTCCGTCGTCGGCCTCGGAACCTCCTCCCTCTCCTCTCCTTCCTCCAGATCTCCGCGTCTCGTCTCCGGGTTCGTCAGGTCGCC
TGTAGCCGCCAGGAATCCGCTTGCCATGGCGCATGCATCCGGCGGTAGGTTCACCTGCTTTGAGAGAGATTGGCTGCGGAGAGATCTGAATGTGATCGGATTTGGACTGA
TCGGGTGGATTGCACCGTCGAGCATTCCGGTGATCGATGGGAAGAGCTTGACGGGGCTCTTCTTTGAGAGCATTGGGGCAGAGCTTGCGCATTTTCCTTCTCCACCCGCT
CTCACTTCTCAGTTCTGGTAA
Protein sequenceShow/hide protein sequence
MATAFATSSSVVGLGTSSLSSPSSRSPRLVSGFVRSPVAARNPLAMAHASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGAELAHFPSPPA
LTSQFW