| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_004137370.1 U2 small nuclear ribonucleoprotein B'' 2 [Cucumis sativus] | 4.7e-120 | 97.84 | Show/hide |
Query: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDC+AKADGS
Subjt: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEKAEKKRRAEEAHQSVMPNGTTAENGGSNATFRHANPSAAEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
FVPREKKKKQEEKAEKKRRAEE HQS MPNGTT ENGGSNATFRHANPSA EATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Subjt: FVPREKKKKQEEKAEKKRRAEEAHQSVMPNGTTAENGGSNATFRHANPSAAEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Query: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
Subjt: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| XP_008457301.1 PREDICTED: U2 small nuclear ribonucleoprotein B'' 2-like [Cucumis melo] | 2.8e-120 | 98.27 | Show/hide |
Query: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADG+
Subjt: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEKAEKKRRAEEAHQSVMPNGTTAENGGSNATFRHANPSAAEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
FVPREKKKKQEEKAEKKRRAEEAHQS MPNGTT ENGGSNATFRHANPSA EATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Subjt: FVPREKKKKQEEKAEKKRRAEEAHQSVMPNGTTAENGGSNATFRHANPSAAEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Query: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
Subjt: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| XP_022949507.1 U2 small nuclear ribonucleoprotein B'' 2-like [Cucurbita moschata] | 4.4e-118 | 96.54 | Show/hide |
Query: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
ML GDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFY+KPMRIQYAKTKSDCVAKADGS
Subjt: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEKAEKKRRAEEAHQSVMPNGTTAENGGSNATFRHANPSAAEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
FVPREKKKKQEEKAE+KRR EE HQS MPNG TAENGGSNATFRHANPSA EATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Subjt: FVPREKKKKQEEKAEKKRRAEEAHQSVMPNGTTAENGGSNATFRHANPSAAEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Query: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
Subjt: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| XP_023525708.1 U2 small nuclear ribonucleoprotein B'' 2-like isoform X1 [Cucurbita pepo subsp. pepo] | 9.8e-118 | 96.1 | Show/hide |
Query: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
ML GDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFY+KPMRIQYAKTKSDCVAKADGS
Subjt: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEKAEKKRRAEEAHQSVMPNGTTAENGGSNATFRHANPSAAEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
FVPREKKKKQEEKAE+KRR +E HQS MPNG TAENGGSNATFRHANPSA EATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Subjt: FVPREKKKKQEEKAEKKRRAEEAHQSVMPNGTTAENGGSNATFRHANPSAAEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Query: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
Subjt: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| XP_038893561.1 U2 small nuclear ribonucleoprotein B'' 2 [Benincasa hispida] | 8.9e-119 | 98.27 | Show/hide |
Query: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
Subjt: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEKAEKKRRAEEAHQSVMPNGTTAENGGSNATFRHANPSAAEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
FVPREKKKKQEEKAEKKRRAEEAHQS MPNGTT NGGSNATFRHANP+AAEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Subjt: FVPREKKKKQEEKAEKKRRAEEAHQSVMPNGTTAENGGSNATFRHANPSAAEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Query: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
Subjt: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LPT7 Uncharacterized protein | 2.3e-120 | 97.84 | Show/hide |
Query: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDC+AKADGS
Subjt: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEKAEKKRRAEEAHQSVMPNGTTAENGGSNATFRHANPSAAEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
FVPREKKKKQEEKAEKKRRAEE HQS MPNGTT ENGGSNATFRHANPSA EATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Subjt: FVPREKKKKQEEKAEKKRRAEEAHQSVMPNGTTAENGGSNATFRHANPSAAEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Query: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
Subjt: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| A0A1S3C564 U2 small nuclear ribonucleoprotein B'' 2-like | 1.3e-120 | 98.27 | Show/hide |
Query: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADG+
Subjt: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEKAEKKRRAEEAHQSVMPNGTTAENGGSNATFRHANPSAAEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
FVPREKKKKQEEKAEKKRRAEEAHQS MPNGTT ENGGSNATFRHANPSA EATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Subjt: FVPREKKKKQEEKAEKKRRAEEAHQSVMPNGTTAENGGSNATFRHANPSAAEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Query: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
Subjt: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| A0A5D3BF51 U2 small nuclear ribonucleoprotein B'' 2-like | 1.3e-120 | 98.27 | Show/hide |
Query: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADG+
Subjt: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEKAEKKRRAEEAHQSVMPNGTTAENGGSNATFRHANPSAAEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
FVPREKKKKQEEKAEKKRRAEEAHQS MPNGTT ENGGSNATFRHANPSA EATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Subjt: FVPREKKKKQEEKAEKKRRAEEAHQSVMPNGTTAENGGSNATFRHANPSAAEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Query: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
Subjt: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| A0A6J1GC84 U2 small nuclear ribonucleoprotein B'' 2-like | 2.1e-118 | 96.54 | Show/hide |
Query: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
ML GDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFY+KPMRIQYAKTKSDCVAKADGS
Subjt: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEKAEKKRRAEEAHQSVMPNGTTAENGGSNATFRHANPSAAEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
FVPREKKKKQEEKAE+KRR EE HQS MPNG TAENGGSNATFRHANPSA EATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Subjt: FVPREKKKKQEEKAEKKRRAEEAHQSVMPNGTTAENGGSNATFRHANPSAAEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Query: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
Subjt: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| A0A6J1KA04 U2 small nuclear ribonucleoprotein B'' 2-like | 2.1e-118 | 96.54 | Show/hide |
Query: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
ML GDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFY+KPMRIQYAKTKSDCVAKADGS
Subjt: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEKAEKKRRAEEAHQSVMPNGTTAENGGSNATFRHANPSAAEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
FVPREKKKKQEEKAE+KRR EE HQS MPNG TAENGGSNATFRHANPSA EATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Subjt: FVPREKKKKQEEKAEKKRRAEEAHQSVMPNGTTAENGGSNATFRHANPSAAEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEF
Query: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
Subjt: EDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| A2Y0J7 U1 small nuclear ribonucleoprotein A | 6.9e-66 | 58.12 | Show/hide |
Query: PPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGSFVPREK
PPN TIYI NLNEK+K EELK+SL A+FSQ+G+ILDV+A KT + +GQAWV F +V +A+ A++ MQ+FPF+ KPMRIQYAKTKSD +AKADG+FVPRE+
Subjt: PPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGSFVPREK
Query: KKKQEEKAEKKRRAEEAHQ-SVMPNGTTAENGGSNATFRHANPSAAE--------ATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAF
+K+ +EK EKK++ E+ H S + G A G A P A PNNILF++NLPHET+ MMLQ+LF QYPGF+EVRM+EAKPGIAF
Subjt: KKKQEEKAEKKRRAEEAHQ-SVMPNGTTAENGGSNATFRHANPSAAE--------ATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAF
Query: VEFEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
VE+ D+ Q++ AM LQGFKI + M IS+AKK
Subjt: VEFEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| B8AM21 U2 small nuclear ribonucleoprotein B'' | 1.6e-86 | 74.68 | Show/hide |
Query: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
MLSGDIPPNQT+Y++NLNEKVKKEELKRSLYAL SQYGRILDVVALKTP+LRGQAWV FSE+TAA+NA R +Q F FY K MR+QYAKTKSDC+A DGS
Subjt: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEK-AEKKRRAEEAHQSVMPNGTTAENG-GSNATFRHANPSAAEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFV
P+EK+KKQEEK AEKKRRAEEA QS PN NG G A+ A PNNILFI+NLP ET+SMMLQ+LFQQYPGFREVRMIEAKPGIAFV
Subjt: FVPREKKKKQEEK-AEKKRRAEEAHQSVMPNGTTAENG-GSNATFRHANPSAAEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFV
Query: EFEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
E+EDD QS +AMQALQGFKI P +PMAIS+AKK
Subjt: EFEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| O22922 U2 small nuclear ribonucleoprotein B'' | 6.5e-88 | 71.06 | Show/hide |
Query: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
ML+ DIPPNQ+IYI+NLNE++KKEELKRSLY LFSQ+GRILDVVALKTP+LRGQAWV FSEVTAA +AVRQMQNFPFY+KPMR+QYAK KSDC+AKA+G+
Subjt: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEKAEKKRRAEEAHQSV---MPNGTTAENGGSNATFRHANPSAAEA-TPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIA
FVP++KK+KQEEK E+KR + + NG +A NG +F+ PS E PNNILFI+NLPHET+SMMLQ+LF+QYPGF+E+RMI+AKPGIA
Subjt: FVPREKKKKQEEKAEKKRRAEEAHQSV---MPNGTTAENGGSNATFRHANPSAAEA-TPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIA
Query: FVEFEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
FVE+EDDVQ+S+AMQ LQGFKI PQ+PM ISFAKK
Subjt: FVEFEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| Q10MR0 U2 small nuclear ribonucleoprotein B'' | 3.5e-86 | 74.25 | Show/hide |
Query: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
MLSGDIPPNQT+Y++NLNEKVKKEELKRSLYAL SQYGRILDVVALKTP+LRGQAWV FSE+TAA+NA R +Q F FY K MR+QYAKT+SDC+A DGS
Subjt: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEK-AEKKRRAEEAHQSVMPNGTTAENG-GSNATFRHANPSAAEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFV
P+EK+KKQEEK AEKKRRAEEA QS PN NG G A+ A PNNILFI+NLP ET+SMMLQ+LFQQYPGFREVRMIEAKPGIAFV
Subjt: FVPREKKKKQEEK-AEKKRRAEEAHQSVMPNGTTAENG-GSNATFRHANPSAAEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFV
Query: EFEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
E+EDD QS +AMQALQGFKI P +PMAIS+AKK
Subjt: EFEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| Q8H1S6 U2 small nuclear ribonucleoprotein B'' 2 | 8.7e-93 | 75.86 | Show/hide |
Query: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
ML+ DIPPNQ+IYIK++NEK+KKEELKRSLY LFSQ+GR+LDVVALKTP+LRGQAWV F+EVTAASNAVRQMQNFPFY+KPMRIQYAK+KSD V KA+GS
Subjt: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEKAEKKRRAEEAHQSVMPNGTTAENGGSNATFRHANPSAAEA-TPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVE
FVP+EKK KQEEK E+KR AEE Q MPNG T +NG F+ PS + PNNILFI NLP ET+SMMLQ+LF+QYPGF+E+RMIEAKPGIAFVE
Subjt: FVPREKKKKQEEKAEKKRRAEEAHQSVMPNGTTAENGGSNATFRHANPSAAEA-TPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVE
Query: FEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
+EDDVQSSMAMQALQGFKI PQ+PM +SFAKK
Subjt: FEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G06960.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 6.2e-94 | 75.86 | Show/hide |
Query: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
ML+ DIPPNQ+IYIK++NEK+KKEELKRSLY LFSQ+GR+LDVVALKTP+LRGQAWV F+EVTAASNAVRQMQNFPFY+KPMRIQYAK+KSD V KA+GS
Subjt: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEKAEKKRRAEEAHQSVMPNGTTAENGGSNATFRHANPSAAEA-TPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVE
FVP+EKK KQEEK E+KR AEE Q MPNG T +NG F+ PS + PNNILFI NLP ET+SMMLQ+LF+QYPGF+E+RMIEAKPGIAFVE
Subjt: FVPREKKKKQEEKAEKKRRAEEAHQSVMPNGTTAENGGSNATFRHANPSAAEA-TPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVE
Query: FEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
+EDDVQSSMAMQALQGFKI PQ+PM +SFAKK
Subjt: FEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| AT1G06960.2 RNA-binding (RRM/RBD/RNP motifs) family protein | 6.8e-93 | 75.43 | Show/hide |
Query: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
ML+ DIPPNQ+IYIK++NEK+KKEELKRSLY LFSQ+GR+LDVVALKTP+LRGQAWV F+EVTAASNAVRQMQNFPFY+KPMRIQYAK+KSD V KA+GS
Subjt: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEKAEKKRRAEEAHQSVMPNGTTAENGGSNATFRHANPSAAEA-TPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVE
FVP+EKK KQEEK E+KR AEE Q MPNG T +NG PS + PNNILFI NLP ET+SMMLQ+LF+QYPGF+E+RMIEAKPGIAFVE
Subjt: FVPREKKKKQEEKAEKKRRAEEAHQSVMPNGTTAENGGSNATFRHANPSAAEA-TPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVE
Query: FEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
+EDDVQSSMAMQALQGFKI PQ+PM +SFAKK
Subjt: FEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| AT1G06960.3 RNA-binding (RRM/RBD/RNP motifs) family protein | 5.8e-76 | 74.62 | Show/hide |
Query: QYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGSFVPREKKKKQEEKAEKKRRAEEAHQSVMPNGTTAE
++GR+LDVVALKTP+LRGQAWV F+EVTAASNAVRQMQNFPFY+KPMRIQYAK+KSD V KA+GSFVP+EKK KQEEK E+KR AEE Q MPNG T +
Subjt: QYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGSFVPREKKKKQEEKAEKKRRAEEAHQSVMPNGTTAE
Query: NGGSNATFRHANPSAAEA-TPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEFEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
NG F+ PS + PNNILFI NLP ET+SMMLQ+LF+QYPGF+E+RMIEAKPGIAFVE+EDDVQSSMAMQALQGFKI PQ+PM +SFAKK
Subjt: NGGSNATFRHANPSAAEA-TPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEFEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| AT2G30260.1 U2 small nuclear ribonucleoprotein B | 4.6e-89 | 71.06 | Show/hide |
Query: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
ML+ DIPPNQ+IYI+NLNE++KKEELKRSLY LFSQ+GRILDVVALKTP+LRGQAWV FSEVTAA +AVRQMQNFPFY+KPMR+QYAK KSDC+AKA+G+
Subjt: MLSGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGS
Query: FVPREKKKKQEEKAEKKRRAEEAHQSV---MPNGTTAENGGSNATFRHANPSAAEA-TPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIA
FVP++KK+KQEEK E+KR + + NG +A NG +F+ PS E PNNILFI+NLPHET+SMMLQ+LF+QYPGF+E+RMI+AKPGIA
Subjt: FVPREKKKKQEEKAEKKRRAEEAHQSV---MPNGTTAENGGSNATFRHANPSAAEA-TPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIA
Query: FVEFEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
FVE+EDDVQ+S+AMQ LQGFKI PQ+PM ISFAKK
Subjt: FVEFEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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| AT2G47580.1 spliceosomal protein U1A | 1.6e-65 | 56.9 | Show/hide |
Query: DIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGSFVPR
++ PNQTIYI NLNEKVK +ELK+SL A+FSQ+G+IL+++A KT + +GQAWV F +AS A+ +M NFPFY+K MRIQYAKTKSD VAKADG+FVPR
Subjt: DIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCVAKADGSFVPR
Query: EKKKKQEEKAEKKRRAEEAHQSVM---------PNGTTAENGGSNATF---RHANPSAAEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAK
EK+K+ EEK K++ ++ H S P A S + N A A PNNILF++NLPHET+ M+LQ+LF QY GF+EVRMIEAK
Subjt: EKKKKQEEKAEKKRRAEEAHQSVM---------PNGTTAENGGSNATF---RHANPSAAEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAK
Query: PGIAFVEFEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
PGIAFVEF D++QS++AMQ LQGFKI Q+ M I++AKK
Subjt: PGIAFVEFEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
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