; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10021800 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021800
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationChr05:16890345..16890665
RNA-Seq ExpressionHG10021800
SyntenyHG10021800
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN60970.1 hypothetical protein VITISV_026408 [Vitis vinifera]2.6e-0430.53Show/hide
Query:  MVREFYSSIIDNRD-VAYVRGHPVFFTPYDINCLFCLPNIGQDEYSDFTPGPFDQVFIVETLGGLGTRWVFKREAQVRIISTDLFVSSQIWHSFI
        +VREFY+++ ++     +VRG  V F+ + IN  F LP+I  D+Y+ F  G  D   ++ T+    T+W    +  V   S  L    + W+ F+
Subjt:  MVREFYSSIIDNRD-VAYVRGHPVFFTPYDINCLFCLPNIGQDEYSDFTPGPFDQVFIVETLGGLGTRWVFKREAQVRIISTDLFVSSQIWHSFI

KAA0033353.1 putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa]5.3e-1035.05Show/hide
Query:  MVREFYSSIIDNRDVAYVRGHPVFFTPYDINCLFCLPNIGQDEYSDFTPGPFDQVFIVETLGGLGTRWVFKREAQVRIISTDLFVSSQIWHSFICGR
        +VREFY+++++    ++VRG  V F    IN  + LPN  +DEY+ +     D   I+  L   G  W+      +R  S++L VS+Q+WH FIC +
Subjt:  MVREFYSSIIDNRDVAYVRGHPVFFTPYDINCLFCLPNIGQDEYSDFTPGPFDQVFIVETLGGLGTRWVFKREAQVRIISTDLFVSSQIWHSFICGR

KGN46897.1 hypothetical protein Csa_020731 [Cucumis sativus]5.3e-1036.08Show/hide
Query:  MVREFYSSIIDNRDVAYVRGHPVFFTPYDINCLFCLPNIGQDEYSDFTPGPFDQVFIVETLGGLGTRWVFKREAQVRIISTDLFVSSQIWHSFICGR
        +VREFY+++++    ++VRG  V F    IN  + LPN  +DEY  +     D   I+  L   G  WV      +R  S++L VS+Q+WH FIC +
Subjt:  MVREFYSSIIDNRDVAYVRGHPVFFTPYDINCLFCLPNIGQDEYSDFTPGPFDQVFIVETLGGLGTRWVFKREAQVRIISTDLFVSSQIWHSFICGR

XP_008458668.1 PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo]5.3e-1035.05Show/hide
Query:  MVREFYSSIIDNRDVAYVRGHPVFFTPYDINCLFCLPNIGQDEYSDFTPGPFDQVFIVETLGGLGTRWVFKREAQVRIISTDLFVSSQIWHSFICGR
        +VREFY+++++    ++VRG  V F    IN  + LPN  +DEY+ +     D   I+  L   G  W+      +R  S++L VS+Q+WH FIC +
Subjt:  MVREFYSSIIDNRDVAYVRGHPVFFTPYDINCLFCLPNIGQDEYSDFTPGPFDQVFIVETLGGLGTRWVFKREAQVRIISTDLFVSSQIWHSFICGR

TrEMBL top hitse value%identityAlignment
A0A0A0KER1 Uncharacterized protein2.6e-1036.08Show/hide
Query:  MVREFYSSIIDNRDVAYVRGHPVFFTPYDINCLFCLPNIGQDEYSDFTPGPFDQVFIVETLGGLGTRWVFKREAQVRIISTDLFVSSQIWHSFICGR
        +VREFY+++++    ++VRG  V F    IN  + LPN  +DEY  +     D   I+  L   G  WV      +R  S++L VS+Q+WH FIC +
Subjt:  MVREFYSSIIDNRDVAYVRGHPVFFTPYDINCLFCLPNIGQDEYSDFTPGPFDQVFIVETLGGLGTRWVFKREAQVRIISTDLFVSSQIWHSFICGR

A0A1S3C7Y0 uncharacterized protein LOC1034979962.6e-1035.05Show/hide
Query:  MVREFYSSIIDNRDVAYVRGHPVFFTPYDINCLFCLPNIGQDEYSDFTPGPFDQVFIVETLGGLGTRWVFKREAQVRIISTDLFVSSQIWHSFICGR
        +VREFY+++++    ++VRG  V F    IN  + LPN  +DEY+ +     D   I+  L   G  W+      +R  S++L VS+Q+WH FIC +
Subjt:  MVREFYSSIIDNRDVAYVRGHPVFFTPYDINCLFCLPNIGQDEYSDFTPGPFDQVFIVETLGGLGTRWVFKREAQVRIISTDLFVSSQIWHSFICGR

A0A2P5A5U9 Uncharacterized protein (Fragment)8.0e-0433.73Show/hide
Query:  VAYVRGHPVFFTPYDINCLFCLPNIGQDEYSDFTPGPFDQVFIVETLGGLGTRWVFKREAQVRIISTDLFVSSQIWHSFICGR
        +A V G  V FT   IN  F LPNI  DE + F   P D   I++ L   GT W++ ++ Q  + +  +  S++ W  F+  R
Subjt:  VAYVRGHPVFFTPYDINCLFCLPNIGQDEYSDFTPGPFDQVFIVETLGGLGTRWVFKREAQVRIISTDLFVSSQIWHSFICGR

A0A5D3BBY3 Putative S-locus lectin protein kinase family protein2.6e-1035.05Show/hide
Query:  MVREFYSSIIDNRDVAYVRGHPVFFTPYDINCLFCLPNIGQDEYSDFTPGPFDQVFIVETLGGLGTRWVFKREAQVRIISTDLFVSSQIWHSFICGR
        +VREFY+++++    ++VRG  V F    IN  + LPN  +DEY+ +     D   I+  L   G  W+      +R  S++L VS+Q+WH FIC +
Subjt:  MVREFYSSIIDNRDVAYVRGHPVFFTPYDINCLFCLPNIGQDEYSDFTPGPFDQVFIVETLGGLGTRWVFKREAQVRIISTDLFVSSQIWHSFICGR

A5B5G7 Integrase catalytic domain-containing protein1.2e-0430.53Show/hide
Query:  MVREFYSSIIDNRD-VAYVRGHPVFFTPYDINCLFCLPNIGQDEYSDFTPGPFDQVFIVETLGGLGTRWVFKREAQVRIISTDLFVSSQIWHSFI
        +VREFY+++ ++     +VRG  V F+ + IN  F LP+I  D+Y+ F  G  D   ++ T+    T+W    +  V   S  L    + W+ F+
Subjt:  MVREFYSSIIDNRD-VAYVRGHPVFFTPYDINCLFCLPNIGQDEYSDFTPGPFDQVFIVETLGGLGTRWVFKREAQVRIISTDLFVSSQIWHSFI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAGGGAATTTTACTCAAGCATAATCGACAATAGGGACGTTGCTTATGTTCGAGGTCACCCTGTTTTCTTCACCCCATATGACATCAATTGTCTCTTTTGTTTGCC
TAATATAGGTCAAGATGAGTACTCAGATTTTACTCCAGGACCCTTTGACCAGGTCTTCATTGTCGAGACCCTAGGTGGGCTTGGGACGCGATGGGTATTTAAGAGAGAGG
CGCAGGTTAGGATCATAAGTACTGACCTCTTTGTTTCTAGTCAGATATGGCATTCATTTATTTGCGGTAGATTTACTAACGCGTCTTGCAGACATCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAAGGGAATTTTACTCAAGCATAATCGACAATAGGGACGTTGCTTATGTTCGAGGTCACCCTGTTTTCTTCACCCCATATGACATCAATTGTCTCTTTTGTTTGCC
TAATATAGGTCAAGATGAGTACTCAGATTTTACTCCAGGACCCTTTGACCAGGTCTTCATTGTCGAGACCCTAGGTGGGCTTGGGACGCGATGGGTATTTAAGAGAGAGG
CGCAGGTTAGGATCATAAGTACTGACCTCTTTGTTTCTAGTCAGATATGGCATTCATTTATTTGCGGTAGATTTACTAACGCGTCTTGCAGACATCAGTAG
Protein sequenceShow/hide protein sequence
MVREFYSSIIDNRDVAYVRGHPVFFTPYDINCLFCLPNIGQDEYSDFTPGPFDQVFIVETLGGLGTRWVFKREAQVRIISTDLFVSSQIWHSFICGRFTNASCRHQ