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HG10021809 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021809
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionran-binding protein 1 homolog a-like
Genome locationChr05:17027903..17028530
RNA-Seq ExpressionHG10021809
SyntenyHG10021809
Gene Ontology termsGO:0046907 - intracellular transport (biological process)
GO:0005622 - intracellular (cellular component)
InterPro domainsIPR000156 - Ran binding domain
IPR011993 - PH-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFZ19644.1 pleckstrin homology (PH) domain superfamily protein [Actinidia rufa]1.3e-3561.76Show/hide
Query:  SGKDEDTGAQVAPIVKLEAVDITTGEEDEDN---------------------------------TGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDK
        +G+DEDTGAQVAPIVKLE V +TTGEEDED+                                 TGKV LVMRQ KTLKIC NHLVLP+M VQEHAGNDK
Subjt:  SGKDEDTGAQVAPIVKLEAVDITTGEEDEDN---------------------------------TGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDK

Query:  SCVWHATDFADGELKDELFCIRFSSIESEYNFLILF
        SCVWHATDFADGELKDELFCIRF S++S+Y+ L  F
Subjt:  SCVWHATDFADGELKDELFCIRFSSIESEYNFLILF

KAG6583351.1 Ran-binding protein 1-like c, partial [Cucurbita argyrosperma subsp. sororia]1.9e-3460.87Show/hide
Query:  SGKDEDTGAQVAPIVKLEAVDITTGEEDED---------------------------------NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDK
        +G+DEDTGAQVAPIVKLE V +TTGEE+ED                                  TGKV LVMRQ KTLKIC NHLVLPSM VQEHAGNDK
Subjt:  SGKDEDTGAQVAPIVKLEAVDITTGEEDED---------------------------------NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDK

Query:  SCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQ
        SCVWHATDFADGELKDELFCIRF SIE+  +F+  F +
Subjt:  SCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQ

XP_004145252.1 ran-binding protein 1 homolog a [Cucumis sativus]1.2e-3663.04Show/hide
Query:  SGKDEDTGAQVAPIVKLEAVDITTGEEDED---------------------------------NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDK
        +G+DEDTGAQVAPIVKLEAVD+TTGEEDED                                  TGKV LVMRQ KTLKIC NHLVLPSM VQEHAGNDK
Subjt:  SGKDEDTGAQVAPIVKLEAVDITTGEEDED---------------------------------NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDK

Query:  SCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQ
        SCVWHATDFADGELKDELFCIRF SIE+  +F+  F +
Subjt:  SCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQ

XP_022970594.1 ran-binding protein 1 homolog a-like [Cucurbita maxima]1.9e-3460.87Show/hide
Query:  SGKDEDTGAQVAPIVKLEAVDITTGEEDED---------------------------------NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDK
        +G+DEDTGAQVAPIVKLE V +TTGEE+ED                                  TGKV LVMRQ KTLKIC NHLVLPSM VQEHAGNDK
Subjt:  SGKDEDTGAQVAPIVKLEAVDITTGEEDED---------------------------------NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDK

Query:  SCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQ
        SCVWHATDFADGELKDELFCIRF SIE+  +F+  F +
Subjt:  SCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQ

XP_023519268.1 ran-binding protein 1 homolog a-like [Cucurbita pepo subsp. pepo]1.9e-3460.87Show/hide
Query:  SGKDEDTGAQVAPIVKLEAVDITTGEEDED---------------------------------NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDK
        +G+DEDTGAQVAPIVKLE V +TTGEE+ED                                  TGKV LVMRQ KTLKIC NHLVLPSM VQEHAGNDK
Subjt:  SGKDEDTGAQVAPIVKLEAVDITTGEEDED---------------------------------NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDK

Query:  SCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQ
        SCVWHATDFADGELKDELFCIRF SIE+  +F+  F +
Subjt:  SCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQ

TrEMBL top hitse value%identityAlignment
A0A0A0LV78 RanBD1 domain-containing protein5.8e-3763.04Show/hide
Query:  SGKDEDTGAQVAPIVKLEAVDITTGEEDED---------------------------------NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDK
        +G+DEDTGAQVAPIVKLEAVD+TTGEEDED                                  TGKV LVMRQ KTLKIC NHLVLPSM VQEHAGNDK
Subjt:  SGKDEDTGAQVAPIVKLEAVDITTGEEDED---------------------------------NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDK

Query:  SCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQ
        SCVWHATDFADGELKDELFCIRF SIE+  +F+  F +
Subjt:  SCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQ

A0A5B7BFU3 Putative Ran-binding protein 1-b-like protein (Fragment)2.1e-3457.97Show/hide
Query:  SGKDEDTGAQVAPIVKLEAVDITTGEEDED---------------------------------NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDK
        +G+DEDTGAQVAPIV+LE V + TGEEDED                                  TGKV LVMRQ KTLKIC NHLVLP+M VQEH+GNDK
Subjt:  SGKDEDTGAQVAPIVKLEAVDITTGEEDED---------------------------------NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDK

Query:  SCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQ
        SCVWHATDFADGELKDELFCIRF+S+E+   F+ +F +
Subjt:  SCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQ

A0A6J1HM04 ran-binding protein 1 homolog a-like9.3e-3560.87Show/hide
Query:  SGKDEDTGAQVAPIVKLEAVDITTGEEDED---------------------------------NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDK
        +G+DEDTGAQVAPIVKLE V +TTGEE+ED                                  TGKV LVMRQ KTLKIC NHLVLPSM VQEHAGNDK
Subjt:  SGKDEDTGAQVAPIVKLEAVDITTGEEDED---------------------------------NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDK

Query:  SCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQ
        SCVWHATDFADGELKDELFCIRF SIE+  +F+  F +
Subjt:  SCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQ

A0A6J1I618 ran-binding protein 1 homolog a-like9.3e-3560.87Show/hide
Query:  SGKDEDTGAQVAPIVKLEAVDITTGEEDED---------------------------------NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDK
        +G+DEDTGAQVAPIVKLE V +TTGEE+ED                                  TGKV LVMRQ KTLKIC NHLVLPSM VQEHAGNDK
Subjt:  SGKDEDTGAQVAPIVKLEAVDITTGEEDED---------------------------------NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDK

Query:  SCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQ
        SCVWHATDFADGELKDELFCIRF SIE+  +F+  F +
Subjt:  SCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQ

A0A7J0HA86 Pleckstrin homology (PH) domain superfamily protein6.4e-3661.76Show/hide
Query:  SGKDEDTGAQVAPIVKLEAVDITTGEEDEDN---------------------------------TGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDK
        +G+DEDTGAQVAPIVKLE V +TTGEEDED+                                 TGKV LVMRQ KTLKIC NHLVLP+M VQEHAGNDK
Subjt:  SGKDEDTGAQVAPIVKLEAVDITTGEEDEDN---------------------------------TGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDK

Query:  SCVWHATDFADGELKDELFCIRFSSIESEYNFLILF
        SCVWHATDFADGELKDELFCIRF S++S+Y+ L  F
Subjt:  SCVWHATDFADGELKDELFCIRFSSIESEYNFLILF

SwissProt top hitse value%identityAlignment
P92985 Ran-binding protein 1 homolog c1.4e-2470.27Show/hide
Query:  TGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDKSCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQ
        TGKV LVMRQ KTLKIC NHL+   M VQEH+GN+KSC+WHATDF+DGELKDELFCIRF+SIE+   F+  F +
Subjt:  TGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDKSCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQ

P92985 Ran-binding protein 1 homolog c1.5e-0582.14Show/hide
Query:  KDEDTGAQVAPIVKLEAVDITTGEEDED
        +DEDTGAQVAPIV+LE V +TTGEEDED
Subjt:  KDEDTGAQVAPIVKLEAVDITTGEEDED

Q09717 Ran-specific GTPase-activating protein 11.2e-1049.23Show/hide
Query:  TGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDKSCVWH-ATDFADGELKDELFCIRFSSIES
        TGK  LVMR+ KTLK+C NHL++P M +  + G+D+S VW  A D ++GE   E F IRF++ E+
Subjt:  TGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDKSCVWH-ATDFADGELKDELFCIRFSSIES

Q8RWG8 Ran-binding protein 1 homolog b2.9e-3354.68Show/hide
Query:  GSGKDEDTGAQVAPIVKLEAVDITTGEEDEDN---------------------------------TGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGND
        G+ +DEDTGAQVAPIV+LE V +TTGEEDED                                  +GK+ LVMRQ KTLKIC NHLV   M VQEHAGND
Subjt:  GSGKDEDTGAQVAPIVKLEAVDITTGEEDEDN---------------------------------TGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGND

Query:  KSCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQ
        KSCVWHA DF+DGELKDELFCIRF+S+E+   F+  F +
Subjt:  KSCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQ

Q9ERU9 E3 SUMO-protein ligase RanBP21.9e-1333.57Show/hide
Query:  GGS--GKDEDTGAQVAPIVKL-EAVDITTGEEDED---------------------------------NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEH
        GGS  G +ED G    P+V L + +++ TGEEDE+                                  +GK+ L+MR+ + LKIC NH + P M +  +
Subjt:  GGS--GKDEDTGAQVAPIVKL-EAVDITTGEEDED---------------------------------NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEH

Query:  AGNDKSCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQ
        AG+D+S VWHA D+AD   K E   IRF + E    F   F +
Subjt:  AGNDKSCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQ

Q9LMK7 Ran-binding protein 1 homolog a3.4e-3454.23Show/hide
Query:  QRGGSGKDEDTGAQVAPIVKLEAVDITTGEEDED---------------------------------NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHA
        +  G+ +DEDTGAQVAPIV+LE V +TTGEEDED                                 NTGK+ LVMRQ KTLKIC NH V   M VQEH 
Subjt:  QRGGSGKDEDTGAQVAPIVKLEAVDITTGEEDED---------------------------------NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHA

Query:  GNDKSCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQ
        GN+KSCVWHA DFADGELKDELFCIRF+SIE+   F+  F +
Subjt:  GNDKSCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQ

Arabidopsis top hitse value%identityAlignment
AT1G07140.1 Pleckstrin homology (PH) domain superfamily protein2.4e-3554.23Show/hide
Query:  QRGGSGKDEDTGAQVAPIVKLEAVDITTGEEDED---------------------------------NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHA
        +  G+ +DEDTGAQVAPIV+LE V +TTGEEDED                                 NTGK+ LVMRQ KTLKIC NH V   M VQEH 
Subjt:  QRGGSGKDEDTGAQVAPIVKLEAVDITTGEEDED---------------------------------NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHA

Query:  GNDKSCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQ
        GN+KSCVWHA DFADGELKDELFCIRF+SIE+   F+  F +
Subjt:  GNDKSCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQ

AT2G30060.1 Pleckstrin homology (PH) domain superfamily protein2.0e-3454.68Show/hide
Query:  GSGKDEDTGAQVAPIVKLEAVDITTGEEDEDN---------------------------------TGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGND
        G+ +DEDTGAQVAPIV+LE V +TTGEEDED                                  +GK+ LVMRQ KTLKIC NHLV   M VQEHAGND
Subjt:  GSGKDEDTGAQVAPIVKLEAVDITTGEEDEDN---------------------------------TGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGND

Query:  KSCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQ
        KSCVWHA DF+DGELKDELFCIRF+S+E+   F+  F +
Subjt:  KSCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQ

AT5G58590.1 RAN binding protein 11.0e-2570.27Show/hide
Query:  TGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDKSCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQ
        TGKV LVMRQ KTLKIC NHL+   M VQEH+GN+KSC+WHATDF+DGELKDELFCIRF+SIE+   F+  F +
Subjt:  TGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDKSCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQ

AT5G58590.1 RAN binding protein 11.1e-0682.14Show/hide
Query:  KDEDTGAQVAPIVKLEAVDITTGEEDED
        +DEDTGAQVAPIV+LE V +TTGEEDED
Subjt:  KDEDTGAQVAPIVKLEAVDITTGEEDED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACAACGAGGAGGTTCCGGAAAAGATGAAGACACTGGAGCTCAAGTCGCCCCGATCGTCAAGTTGGAGGCGGTTGACATTACCACCGGTGAAGAAGATGAGGACAA
TACTGGAAAGGTTTGCCTTGTTATGAGACAGCCTAAGACGCTTAAGATCTGCACTAATCATCTTGTTCTTCCATCAATGATGGTTCAGGAACACGCGGGAAATGATAAAT
CGTGCGTGTGGCATGCGACTGACTTTGCTGATGGCGAATTGAAAGATGAGCTTTTCTGTATCAGATTCTCATCTATTGAGAGTGAGTACAATTTTCTAATTCTTTTTCCC
CAAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGACAACGAGGAGGTTCCGGAAAAGATGAAGACACTGGAGCTCAAGTCGCCCCGATCGTCAAGTTGGAGGCGGTTGACATTACCACCGGTGAAGAAGATGAGGACAA
TACTGGAAAGGTTTGCCTTGTTATGAGACAGCCTAAGACGCTTAAGATCTGCACTAATCATCTTGTTCTTCCATCAATGATGGTTCAGGAACACGCGGGAAATGATAAAT
CGTGCGTGTGGCATGCGACTGACTTTGCTGATGGCGAATTGAAAGATGAGCTTTTCTGTATCAGATTCTCATCTATTGAGAGTGAGTACAATTTTCTAATTCTTTTTCCC
CAAAATTAG
Protein sequenceShow/hide protein sequence
MRQRGGSGKDEDTGAQVAPIVKLEAVDITTGEEDEDNTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDKSCVWHATDFADGELKDELFCIRFSSIESEYNFLILFP
QN