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HG10021822 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021822
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionextensin-like isoform X2
Genome locationChr05:17178347..17178856
RNA-Seq ExpressionHG10021822
SyntenyHG10021822
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031836.1 Protein PSY3 [Cucumis melo var. makuwa]5.3e-1067.27Show/hide
Query:  MDYFKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPP
        MDY KARL LFLLLSF L+T AR+ PHSE Q+    I DY DPG NPRHDP  PP
Subjt:  MDYFKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPP

KAA0031837.1 hypothetical protein E6C27_scaffold848G00870 [Cucumis melo var. makuwa]5.3e-1065.45Show/hide
Query:  MDYFKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPP
        MDY K RL L LLLSFA++T AR+ PHSE Q+   TI DY DPG NPRHDP  PP
Subjt:  MDYFKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPP

KAA0031838.1 hypothetical protein E6C27_scaffold848G00880 [Cucumis melo var. makuwa]2.0e-0967.86Show/hide
Query:  MDYFKARL-TLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPP
        M+YFKARL  LFLLLSFAL+T AR+ PHSE Q+    I DY DPG NPRHDP  PP
Subjt:  MDYFKARL-TLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPP

KGN65816.1 hypothetical protein Csa_023196 [Cucumis sativus]1.4e-1067.86Show/hide
Query:  MDYFKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPPM
        MDY KARL LFLLLSFAL T AR+ PHSE Q+ T  + DY DPG NPRHDP  PP+
Subjt:  MDYFKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPPM

XP_038895781.1 circumsporozoite protein-like [Benincasa hispida]1.6e-3885.57Show/hide
Query:  MDYFKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPPMMINDYVDPGANPRHDPNQPP-MINDYADPGANPRHDPTQPP
        M+YFKARLT FLLLSFALITLAR+TPHSE Q+ TITI DY DPG NPRHDPNQPPMMINDY DPGANPRHDPNQ P MINDY DPGANPRHDP QPP
Subjt:  MDYFKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPPMMINDYVDPGANPRHDPNQPP-MINDYADPGANPRHDPTQPP

TrEMBL top hitse value%identityAlignment
A0A0A0M0T8 Uncharacterized protein6.8e-1167.86Show/hide
Query:  MDYFKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPPM
        MDY KARL LFLLLSFAL T AR+ PHSE Q+ T  + DY DPG NPRHDP  PP+
Subjt:  MDYFKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPPM

A0A5A7SMH7 Uncharacterized protein9.8e-1067.86Show/hide
Query:  MDYFKARL-TLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPP
        M+YFKARL  LFLLLSFAL+T AR+ PHSE Q+    I DY DPG NPRHDP  PP
Subjt:  MDYFKARL-TLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPP

A0A5A7SPC6 Protein PSY32.6e-1067.27Show/hide
Query:  MDYFKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPP
        MDY KARL LFLLLSF L+T AR+ PHSE Q+    I DY DPG NPRHDP  PP
Subjt:  MDYFKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPP

A0A5D3BBU7 Uncharacterized protein2.6e-1065.45Show/hide
Query:  MDYFKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPP
        MDY K RL L LLLSFA++T AR+ PHSE Q+   TI DY DPG NPRHDP  PP
Subjt:  MDYFKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPP

A0A6J1G9M0 extensin-like isoform X22.8e-0944.35Show/hide
Query:  FKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQP-----------PMMINDYVDPGAN-------PRHDPNQPP-----MIND
        FK  L L  LLSFAL++ AR+   S KQ T I I DY DPG NP   P  P           P  INDY DPG N       P+  P  PP     +IND
Subjt:  FKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQP-----------PMMINDYVDPGAN-------PRHDPNQPP-----MIND

Query:  YADPGANPRHDPTQP
        Y+DPG NP   P  P
Subjt:  YADPGANPRHDPTQP

SwissProt top hitse value%identityAlignment
P26694 Circumsporozoite protein7.7e-0444.12Show/hide
Query:  DYVDPGDNPRHDPNQPPMM---INDYVDPGANPRHDPNQPPMINDYA----DPGANPRHDPTQPPHLH
        D VDP  NP  DPN  P +    N  VDP ANP  DPN  P +N  A    DP ANP  +P   P+++
Subjt:  DYVDPGDNPRHDPNQPPMM---INDYVDPGANPRHDPNQPPMINDYA----DPGANPRHDPTQPPHLH

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTATTTCAAAGCTCGTCTTACCCTCTTCCTCTTGCTCTCGTTTGCTCTCATTACCTTAGCTCGGCTCACACCCCATTCAGAAAAACAAGACACGACGATTACGAT
AAAGGACTATGTTGATCCAGGAGATAATCCAAGACATGATCCAAACCAGCCGCCAATGATGATAAATGACTATGTTGATCCAGGAGCTAATCCAAGACATGATCCAAATC
AGCCGCCAATGATAAATGACTATGCTGATCCGGGAGCTAATCCAAGACATGATCCAACTCAACCACCCCACCTCCACCACGACGGTTTGAGGTTAGCACTACCAATGGCC
ACATCAACACAAATATCTAAAAAAATCTACATGCTAGAAGAGGAGGACAAATGGAAAAACTTAAAAGAATCAATGGTGAACATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTATTTCAAAGCTCGTCTTACCCTCTTCCTCTTGCTCTCGTTTGCTCTCATTACCTTAGCTCGGCTCACACCCCATTCAGAAAAACAAGACACGACGATTACGAT
AAAGGACTATGTTGATCCAGGAGATAATCCAAGACATGATCCAAACCAGCCGCCAATGATGATAAATGACTATGTTGATCCAGGAGCTAATCCAAGACATGATCCAAATC
AGCCGCCAATGATAAATGACTATGCTGATCCGGGAGCTAATCCAAGACATGATCCAACTCAACCACCCCACCTCCACCACGACGGTTTGAGGTTAGCACTACCAATGGCC
ACATCAACACAAATATCTAAAAAAATCTACATGCTAGAAGAGGAGGACAAATGGAAAAACTTAAAAGAATCAATGGTGAACATATGA
Protein sequenceShow/hide protein sequence
MDYFKARLTLFLLLSFALITLARLTPHSEKQDTTITIKDYVDPGDNPRHDPNQPPMMINDYVDPGANPRHDPNQPPMINDYADPGANPRHDPTQPPHLHHDGLRLALPMA
TSTQISKKIYMLEEEDKWKNLKESMVNI