CuGenDBv2

Gene ID	HG10021851
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Phosphomethylpyrimidine synthase
Genome location	Chr05:17568221..17568508
RNA-Seq Expression	HG10021851
Synteny	HG10021851
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0031806.1 phosphomethylpyrimidine synthase [Cucumis melo var. makuwa]

2.3e-04

81.82

Show/hide

Query:  KRVGSAGDLLSMIVRPEQKIDTCLSLQFQAMEE
        +R GSAGDL +MI RP+QKIDTCLSLQFQAMEE
Subjt:  KRVGSAGDLLSMIVRPEQKIDTCLSLQFQAMEE

TYJ97327.1 phosphomethylpyrimidine synthase [Cucumis melo var. makuwa]

5.1e-04

78.79

Show/hide

Query:  KRVGSAGDLLSMIVRPEQKIDTCLSLQFQAMEE
        +R G+AGDL +MI RP+QKIDTCLSLQFQAMEE
Subjt:  KRVGSAGDLLSMIVRPEQKIDTCLSLQFQAMEE

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SPA0 Phosphomethylpyrimidine synthase

1.1e-04

81.82

Show/hide

Query:  KRVGSAGDLLSMIVRPEQKIDTCLSLQFQAMEE
        +R GSAGDL +MI RP+QKIDTCLSLQFQAMEE
Subjt:  KRVGSAGDLLSMIVRPEQKIDTCLSLQFQAMEE

A0A5D3BDX2 Phosphomethylpyrimidine synthase

2.5e-04

78.79

Show/hide

Query:  KRVGSAGDLLSMIVRPEQKIDTCLSLQFQAMEE
        +R G+AGDL +MI RP+QKIDTCLSLQFQAMEE
Subjt:  KRVGSAGDLLSMIVRPEQKIDTCLSLQFQAMEE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGGTTTTATGACTTTATCTTGAAAAGTGGAAAGCAGTCGATATCGTTCCCCTTTACGTTAACTTCCACCAAGAGCAAGGAGAACCCATTGCTCTCCATCTTTTTGCA
ATTGATCTGTTACTTCCTTTTGTTGGTTCTTACGGTATACCAATATGCAGGACCACTCGTCAAGGAGAAAAGGGTTGGAAGTGCAGGAGACTTATTGTCGATGATTGTCA
GACCGGAACAGAAAATCGATACCTGCTTGAGTCTCCAGTTTCAGGCCATGGAAGAGTACAAAGTTTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MGFYDFILKSGKQSISFPFTLTSTKSKENPLLSIFLQLICYFLLLVLTVYQYAGPLVKEKRVGSAGDLLSMIVRPEQKIDTCLSLQFQAMEEYKV

HG10021851 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome