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HG10021901 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021901
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTranscription factor PCL1-like
Genome locationChr05:18062419..18062709
RNA-Seq ExpressionHG10021901
SyntenyHG10021901
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR044841 - Transcription factor LUX/BOA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067762.1 transcription factor PCL1-like [Cucumis melo var. makuwa]3.7e-4297.87Show/hide
Query:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSFNDDRTRDHDPMVVEGDEATERDAGSDSR
        ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLS+LRGFQAQAFSSNNFKSFNDDRT+DHDPMVVEGDEATERDAGSDSR
Subjt:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSFNDDRTRDHDPMVVEGDEATERDAGSDSR

XP_008457454.1 PREDICTED: transcription factor PCL1-like [Cucumis melo]3.7e-4297.87Show/hide
Query:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSFNDDRTRDHDPMVVEGDEATERDAGSDSR
        ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLS+LRGFQAQAFSSNNFKSFNDDRT+DHDPMVVEGDEATERDAGSDSR
Subjt:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSFNDDRTRDHDPMVVEGDEATERDAGSDSR

XP_011658264.1 transcription factor PCL1 [Cucumis sativus]3.1e-4196.81Show/hide
Query:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSFNDDRTRDHDPMVVEGDEATERDAGSDSR
        ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLS+LRGFQAQAFSSNNFKSFNDDRT+DHD MVVEGDEATERDAGSDSR
Subjt:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSFNDDRTRDHDPMVVEGDEATERDAGSDSR

XP_023523138.1 transcription factor BOA-like [Cucurbita pepo subsp. pepo]1.9e-3891.49Show/hide
Query:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSFNDDRTRDHDPMVVEGDEATERDAGSDSR
        ETGLPDADDLTPLSQTLIPPELASAFSISTGP RT+MD+ RASQNTLS+LRGFQ+QAFSSNNFKSFNDDRTRDHDPMV EGDE TERDAGSDSR
Subjt:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSFNDDRTRDHDPMVVEGDEATERDAGSDSR

XP_038895186.1 transcription factor PCL1-like [Benincasa hispida]6.2e-4297.87Show/hide
Query:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSFNDDRTRDHDPMVVEGDEATERDAGSDSR
        ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLS+LRGFQAQAFSSNNFKSFNDDRTRDHDP VVEGDEATERDAGSDSR
Subjt:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSFNDDRTRDHDPMVVEGDEATERDAGSDSR

TrEMBL top hitse value%identityAlignment
A0A0A0LXF6 HTH myb-type domain-containing protein1.5e-4196.81Show/hide
Query:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSFNDDRTRDHDPMVVEGDEATERDAGSDSR
        ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLS+LRGFQAQAFSSNNFKSFNDDRT+DHD MVVEGDEATERDAGSDSR
Subjt:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSFNDDRTRDHDPMVVEGDEATERDAGSDSR

A0A1S3C5J0 transcription factor PCL1-like1.8e-4297.87Show/hide
Query:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSFNDDRTRDHDPMVVEGDEATERDAGSDSR
        ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLS+LRGFQAQAFSSNNFKSFNDDRT+DHDPMVVEGDEATERDAGSDSR
Subjt:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSFNDDRTRDHDPMVVEGDEATERDAGSDSR

A0A5A7VHB2 Transcription factor PCL1-like1.8e-4297.87Show/hide
Query:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSFNDDRTRDHDPMVVEGDEATERDAGSDSR
        ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLS+LRGFQAQAFSSNNFKSFNDDRT+DHDPMVVEGDEATERDAGSDSR
Subjt:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSFNDDRTRDHDPMVVEGDEATERDAGSDSR

A0A5D3BEC8 Transcription factor PCL1-like1.8e-4297.87Show/hide
Query:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSFNDDRTRDHDPMVVEGDEATERDAGSDSR
        ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLS+LRGFQAQAFSSNNFKSFNDDRT+DHDPMVVEGDEATERDAGSDSR
Subjt:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSFNDDRTRDHDPMVVEGDEATERDAGSDSR

A0A6J1GCD5 transcription factor BOA-like9.1e-3991.49Show/hide
Query:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSFNDDRTRDHDPMVVEGDEATERDAGSDSR
        ETGLPDADDLTPLSQTLIPPELASAFSISTGP RT+MD+ RASQNTLS+LRGFQ+QAFSSNNFKSFNDDRTRDHDPMV EGDE TERDAGSDSR
Subjt:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSFNDDRTRDHDPMVVEGDEATERDAGSDSR

SwissProt top hitse value%identityAlignment
Q94DH3 Transcription factor PCL12.2e-1057.58Show/hide
Query:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSF
        ETGLP AD+LTPLSQ L+P  LA+AF I   P RTL+DV+RAS  T+S LR  +A + SS++F +F
Subjt:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSF

Q9LTH4 Transcription factor BOA2.1e-0864.71Show/hide
Query:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLR
        E GLP+ DDLTPLSQ L+P  LA AFS+     RT+ DVNRASQ TLS LR
Subjt:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLR

Q9SNB4 Transcription factor LUX9.4e-0945.74Show/hide
Query:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSFNDDRTRDHDPMVVEGDEATERDAGSDSR
        E GLP  +DL  LS +LIPP LA AFSI+    RT+ DVNRAS+ TLS LRG      S  N  S N++        V E D       GSDS+
Subjt:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSFNDDRTRDHDPMVVEGDEATERDAGSDSR

Arabidopsis top hitse value%identityAlignment
AT3G46640.1 Homeodomain-like superfamily protein6.7e-1045.74Show/hide
Query:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSFNDDRTRDHDPMVVEGDEATERDAGSDSR
        E GLP  +DL  LS +LIPP LA AFSI+    RT+ DVNRAS+ TLS LRG      S  N  S N++        V E D       GSDS+
Subjt:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSFNDDRTRDHDPMVVEGDEATERDAGSDSR

AT3G46640.2 Homeodomain-like superfamily protein6.7e-1045.74Show/hide
Query:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSFNDDRTRDHDPMVVEGDEATERDAGSDSR
        E GLP  +DL  LS +LIPP LA AFSI+    RT+ DVNRAS+ TLS LRG      S  N  S N++        V E D       GSDS+
Subjt:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSFNDDRTRDHDPMVVEGDEATERDAGSDSR

AT3G46640.3 Homeodomain-like superfamily protein6.7e-1045.74Show/hide
Query:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSFNDDRTRDHDPMVVEGDEATERDAGSDSR
        E GLP  +DL  LS +LIPP LA AFSI+    RT+ DVNRAS+ TLS LRG      S  N  S N++        V E D       GSDS+
Subjt:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSFNDDRTRDHDPMVVEGDEATERDAGSDSR

AT5G59570.1 Homeodomain-like superfamily protein1.5e-0964.71Show/hide
Query:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLR
        E GLP+ DDLTPLSQ L+P  LA AFS+     RT+ DVNRASQ TLS LR
Subjt:  ETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACGGGTTTGCCTGACGCCGATGATCTCACTCCTCTGTCTCAGACGTTGATTCCGCCGGAGCTTGCATCAGCATTCAGTATATCGACAGGGCCATGTCGGACACT
GATGGATGTCAATCGGGCGTCGCAGAATACGCTATCGGATCTTCGTGGATTTCAAGCACAAGCGTTTTCGTCGAATAATTTCAAGTCGTTTAACGATGATCGGACTCGGG
ATCATGATCCGATGGTGGTTGAAGGAGATGAAGCAACGGAGAGGGATGCAGGGTCTGATTCTAGGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACGGGTTTGCCTGACGCCGATGATCTCACTCCTCTGTCTCAGACGTTGATTCCGCCGGAGCTTGCATCAGCATTCAGTATATCGACAGGGCCATGTCGGACACT
GATGGATGTCAATCGGGCGTCGCAGAATACGCTATCGGATCTTCGTGGATTTCAAGCACAAGCGTTTTCGTCGAATAATTTCAAGTCGTTTAACGATGATCGGACTCGGG
ATCATGATCCGATGGTGGTTGAAGGAGATGAAGCAACGGAGAGGGATGCAGGGTCTGATTCTAGGAATTGA
Protein sequenceShow/hide protein sequence
METGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSDLRGFQAQAFSSNNFKSFNDDRTRDHDPMVVEGDEATERDAGSDSRN