CuGenDBv2

Gene ID	HG10021912
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Rab5-interacting
Genome location	Chr05:18233197..18235111
RNA-Seq Expression	HG10021912
Synteny	HG10021912
Gene Ontology terms	GO:0006996 - organelle organization (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR010742 - Rab5-interacting protein IPR029008 - Rab5-interacting protein family

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0067751.1 Rab5-interacting [Cucumis melo var. makuwa]

3.3e-60

71.02

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLAKLFDTETSWDKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFRGHG
        MKDGK++KVNSQLQHQNGHLPPFKLA+LFD ETSWDKDQLGDVLHW+RQ+VALVCGLLWGSIPLVGGIWFILFLVISTTM+YGYYAMILKVDEEEF GHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLAKLFDTETSWDKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFRGHG

Query:  VLLQEGLFASITLFLFKCLFSISSLLFSLCGPSFIVWDISDNGFVIVLEIARSIGGDRLVAIVACFFISDCAVAYC
        VLLQEGLFAS+TLFL   L ++    FS    + +                     +RLVAIVAC FIS+CAV YC
Subjt:  VLLQEGLFASITLFLFKCLFSISSLLFSLCGPSFIVWDISDNGFVIVLEIARSIGGDRLVAIVACFFISDCAVAYC

XP_008457469.1 PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo]

5.5e-55

92.17

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLAKLFDTETSWDKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFRGHG
        MKDGK++KVNSQLQHQNGHLPPFKLA+LFD ETSWDKDQLGDVLHW+RQ+VALVCGLLWGSIPLVGGIWFILFLVISTTM+YGYYAMILKVDEEEF GHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLAKLFDTETSWDKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFRGHG

Query:  VLLQEGLFASITLFL
        VLLQEGLFAS+TLFL
Subjt:  VLLQEGLFASITLFL

XP_022948613.1 uncharacterized protein C20orf24 homolog [Cucurbita moschata]

5.5e-55

93.91

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLAKLFDTETSWDKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFRGHG
        MKDGKSIKVNSQLQHQNGHLPPFKLA LFD E SWDKDQLGDVLHW+RQ+VALVCGLLWGS+PLVGGIWFILFLVISTTMVYGYYAMILKVDEEEF GHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLAKLFDTETSWDKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFRGHG

Query:  VLLQEGLFASITLFL
        VLLQEGLFASITLFL
Subjt:  VLLQEGLFASITLFL

XP_022998338.1 uncharacterized protein C20orf24 homolog [Cucurbita maxima]

1.2e-54

93.04

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLAKLFDTETSWDKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFRGHG
        MKDGKSIKVNSQLQHQNGHLPPFKLA LFD E SWDKDQLGDVLHW+RQ+VALVCGLLWGS+PLVGGIWFI+FLVISTTMVYGYYAMILKVDEEEF GHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLAKLFDTETSWDKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFRGHG

Query:  VLLQEGLFASITLFL
        VLLQEGLFASITLFL
Subjt:  VLLQEGLFASITLFL

XP_038895585.1 respirasome Complex Assembly Factor 1-like isoform X2 [Benincasa hispida]

1.1e-55

95.65

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLAKLFDTETSWDKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFRGHG
        MKDGKS KVNSQLQHQNGHLPPFKLAKLFD ETSWDKDQLGDVLHW+RQ+VALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEF GHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLAKLFDTETSWDKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFRGHG

Query:  VLLQEGLFASITLFL
        VLLQEGLFASITLFL
Subjt:  VLLQEGLFASITLFL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LY22 Uncharacterized protein

1.1e-53

93.04

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLAKLFDTETSWDKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFRGHG
        MKDGKS+KVNSQLQ QNGHLPPFKLAKLFD ETSWDKDQLGDVLHW+RQ+VALVCGLLWGSIPLVGG+WFILFLVISTTM+YGYYAMILKVDEEEF GHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLAKLFDTETSWDKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFRGHG

Query:  VLLQEGLFASITLFL
        VLLQEGLFASITLFL
Subjt:  VLLQEGLFASITLFL

A0A1S3C692 uncharacterized protein C20orf24 homolog

2.7e-55

92.17

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLAKLFDTETSWDKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFRGHG
        MKDGK++KVNSQLQHQNGHLPPFKLA+LFD ETSWDKDQLGDVLHW+RQ+VALVCGLLWGSIPLVGGIWFILFLVISTTM+YGYYAMILKVDEEEF GHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLAKLFDTETSWDKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFRGHG

Query:  VLLQEGLFASITLFL
        VLLQEGLFAS+TLFL
Subjt:  VLLQEGLFASITLFL

A0A5A7VQ84 Rab5-interacting

1.6e-60

71.02

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLAKLFDTETSWDKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFRGHG
        MKDGK++KVNSQLQHQNGHLPPFKLA+LFD ETSWDKDQLGDVLHW+RQ+VALVCGLLWGSIPLVGGIWFILFLVISTTM+YGYYAMILKVDEEEF GHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLAKLFDTETSWDKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFRGHG

Query:  VLLQEGLFASITLFLFKCLFSISSLLFSLCGPSFIVWDISDNGFVIVLEIARSIGGDRLVAIVACFFISDCAVAYC
        VLLQEGLFAS+TLFL   L ++    FS    + +                     +RLVAIVAC FIS+CAV YC
Subjt:  VLLQEGLFASITLFLFKCLFSISSLLFSLCGPSFIVWDISDNGFVIVLEIARSIGGDRLVAIVACFFISDCAVAYC

A0A6J1G9S8 uncharacterized protein C20orf24 homolog

2.7e-55

93.91

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLAKLFDTETSWDKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFRGHG
        MKDGKSIKVNSQLQHQNGHLPPFKLA LFD E SWDKDQLGDVLHW+RQ+VALVCGLLWGS+PLVGGIWFILFLVISTTMVYGYYAMILKVDEEEF GHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLAKLFDTETSWDKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFRGHG

Query:  VLLQEGLFASITLFL
        VLLQEGLFASITLFL
Subjt:  VLLQEGLFASITLFL

A0A6J1KGG2 uncharacterized protein C20orf24 homolog

6.0e-55

93.04

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLAKLFDTETSWDKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFRGHG
        MKDGKSIKVNSQLQHQNGHLPPFKLA LFD E SWDKDQLGDVLHW+RQ+VALVCGLLWGS+PLVGGIWFI+FLVISTTMVYGYYAMILKVDEEEF GHG
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLAKLFDTETSWDKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFRGHG

Query:  VLLQEGLFASITLFL
        VLLQEGLFASITLFL
Subjt:  VLLQEGLFASITLFL

SwissProt top hits

e value

%identity

Alignment

Q9BUV8 Respirasome Complex Assembly Factor 1

1.4e-13

35.34

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLAKLFDTETSW-DKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFRGH
        M  G+  +   Q Q  NG L     +K+  ++ +W DKD+  DV++W RQ +A+V G++WG +PL G +    F +I+  ++Y Y++  L++DEEE+ G 
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLAKLFDTETSW-DKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFRGH

Query:  GVLLQEGLFASITLFL
          L +EG   S  LF+
Subjt:  GVLLQEGLFASITLFL

Q9CQT9 Respirasome Complex Assembly Factor 1

6.4e-14

36.21

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Query:  MKDGKSIKVNSQLQHQNGHLPPFKLAKLFDTETSW-DKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFRGH
        M  G+  +   Q Q  NG L     +K+  ++ +W DKD+  DV++W RQ +ALV G++WG +PL G +    F +I+  ++Y Y++  L++DEEE+ G 
Subjt:  MKDGKSIKVNSQLQHQNGHLPPFKLAKLFDTETSW-DKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFRGH

Query:  GVLLQEGLFASITLFL
          L +EG   S  LF+
Subjt:  GVLLQEGLFASITLFL

Arabidopsis top hits

e value

%identity

Alignment

AT2G29020.1 Rab5-interacting family protein

1.0e-43

64.39

Show/hide

Query:  MKDGKSIKVNS------QLQHQNGHLPPFKLAKLFDTETSWDKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEE
        MK+GKS K +S      Q+ HQN HL  F  AKLFD+E SWDKDQLGDVLHWIRQ V L+CGLLWG+IPLVGGIW +LFL IS+ +VYGYYA++LK+DEE
Subjt:  MKDGKSIKVNS------QLQHQNGHLPPFKLAKLFDTETSWDKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEE

Query:  EFRGHGVLLQEGLFASITLFLFK--CLFSISS
        +F GH  LLQ+GLFAS++LFL     ++S+SS
Subjt:  EFRGHGVLLQEGLFASITLFLFK--CLFSISS

AT5G59410.1 Rab5-interacting family protein

4.2e-45

74.58

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Query:  MKDGKSIKVN---SQLQHQNGHLPPFKLAKLFDTETSWDKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFR
        MK+ KS K+N    Q  HQN HL P KLAKLFD + SWDKDQLGDVLHWIRQ V L+ GLLWGSIPLVGGIW ILFL IS+ +VYGYYAMILKVDEE+F 
Subjt:  MKDGKSIKVN---SQLQHQNGHLPPFKLAKLFDTETSWDKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFR

Query:  GHGVLLQEGLFASITLFL
        GH  LLQEGLFAS+TLFL
Subjt:  GHGVLLQEGLFASITLFL

Sequences

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CDS sequence

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ATGAAGGATGGGAAATCGATCAAGGTCAATTCTCAGTTGCAGCATCAGAACGGTCACTTGCCGCCGTTCAAATTGGCTAAATTGTTCGATACAGAGACTTCATGGGATAA
GGATCAACTAGGAGATGTCTTGCATTGGATAAGACAGGCAGTTGCTCTTGTATGTGGGTTGCTTTGGGGTTCCATACCTCTGGTTGGAGGAATTTGGTTCATCTTATTCT
TGGTGATATCAACCACTATGGTATATGGATATTATGCAATGATATTGAAGGTAGACGAAGAAGAATTCAGAGGTCATGGAGTTCTCCTCCAGGAAGGGCTGTTTGCTTCC
ATAACACTGTTTCTGTTCAAGTGCTTATTTTCCATTTCTTCTCTTCTGTTCAGCTTATGTGGACCCTCGTTTATAGTTTGGGACATTTCTGATAATGGTTTCGTCATCGT
TCTTGAGATTGCGCGAAGCATTGGAGGAGATAGGTTGGTCGCCATTGTTGCCTGCTTTTTTATTAGTGATTGTGCAGTAGCTTACTGTATTTTAGAAGTGGATTCATTTC
ATTAG

mRNA sequence

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Protein sequence

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MKDGKSIKVNSQLQHQNGHLPPFKLAKLFDTETSWDKDQLGDVLHWIRQAVALVCGLLWGSIPLVGGIWFILFLVISTTMVYGYYAMILKVDEEEFRGHGVLLQEGLFAS
ITLFLFKCLFSISSLLFSLCGPSFIVWDISDNGFVIVLEIARSIGGDRLVAIVACFFISDCAVAYCILEVDSFH

HG10021912 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome