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HG10021929 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021929
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR3-like
Genome locationChr05:18472219..18472578
RNA-Seq ExpressionHG10021929
SyntenyHG10021929
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8039043.1 hypothetical protein FH972_011491 [Carpinus fangiana]3.1e-2248.97Show/hide
Query:  MGLFNSSILLSENDVNAMEFTFLL-------------TYVNSKEEEEEKNGSNNLV------------VEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPK
        MG+ +S + LSE D+NAMEF FL+               V  +EEEEE+N     +            VEDD++GFKTPTSL+HKIP  L+CP APRKPK
Subjt:  MGLFNSSILLSENDVNAMEFTFLL-------------TYVNSKEEEEEKNGSNNLV------------VEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPK

Query:  PRPLTKRKAVERHRLLLDLSSEIQSLFPADFLVGLG-GKIKRVRQ
          PLTKRKA  R R+LLDLS++I++LFP   L  L  GKIK++R+
Subjt:  PRPLTKRKAVERHRLLLDLSSEIQSLFPADFLVGLG-GKIKRVRQ

KAG6607237.1 hypothetical protein SDJN03_00579, partial [Cucurbita argyrosperma subsp. sororia]3.0e-3878.57Show/hide
Query:  MGLFNSSILLSENDVNAMEFTFLLTYVNSKEEEEEKNGSNNLVVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKPRPLTKRKAVERHRLLLDLSSEIQS
        M LFNS+ILLSENDV+AMEFTFLLTY+ SK ++ + +  +   VEDDDNGFKTPTSLEHKIP SLRCPMAPRKPK RP+ KRKAVER RL LDLSSEIQS
Subjt:  MGLFNSSILLSENDVNAMEFTFLLTYVNSKEEEEEKNGSNNLVVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKPRPLTKRKAVERHRLLLDLSSEIQS

Query:  LFPADFLVGLGG
        LFPADFLVGLGG
Subjt:  LFPADFLVGLGG

KAG7036922.1 hypothetical protein SDJN02_00542, partial [Cucurbita argyrosperma subsp. argyrosperma]5.5e-4076.92Show/hide
Query:  MGLFNSSILLSENDVNAMEFTFLLTYVNSKEEEEEKNGSNNLVVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKPRPLTKRKAVERHRLLLDLSSEIQS
        M LFNS+ILLSENDV+AMEFTFLLTY+ SK ++ + +  +   V+DDDNGFKTPTSLEHKIP SLRCPMAPRKPK RP+ KRKAVER RL LDLSSEIQS
Subjt:  MGLFNSSILLSENDVNAMEFTFLLTYVNSKEEEEEKNGSNNLVVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKPRPLTKRKAVERHRLLLDLSSEIQS

Query:  LFPADFLVGLGGKIKRV
        LFPADFLVGLGGK+KR+
Subjt:  LFPADFLVGLGGKIKRV

XP_011658114.1 cyclin-dependent protein kinase inhibitor SMR3 [Cucumis sativus]9.4e-4883.33Show/hide
Query:  MGLFNSSILLSENDVNAMEFTFLLTYVNSKEEEEEK-------NGSNNLVVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKPRPLTKRKAVERHRLLLD
        MGLFNSSILLSENDVN+MEFTFLL YVNSKE+++E+       NG  +  VEDDDNGFKTPTSLEHKIPTSL+CPMAPRKPKPR LTKRKAVERHRLLLD
Subjt:  MGLFNSSILLSENDVNAMEFTFLLTYVNSKEEEEEK-------NGSNNLVVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKPRPLTKRKAVERHRLLLD

Query:  LSSEIQSLFPADFLVGLGGKIKRVRQ
        LSSEIQSLFPA+FLVGLGGKIKRVRQ
Subjt:  LSSEIQSLFPADFLVGLGGKIKRVRQ

XP_016902107.1 PREDICTED: cyclin-dependent protein kinase inhibitor SMR3-like [Cucumis melo]4.7e-4782.03Show/hide
Query:  MGL--FNSSILLSENDVNAMEFTFLLTYVNSKEEEEEK-------NGSNNLVVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKPRPLTKRKAVERHRLL
        MGL  FNSSILLSENDVN+MEFTFLL YVNSKE+++E+       NG +N VV+DDDNGFKTPTSLEHKIPTS++CPMAPRKPKPR LTKRKAVERHRLL
Subjt:  MGL--FNSSILLSENDVNAMEFTFLLTYVNSKEEEEEK-------NGSNNLVVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKPRPLTKRKAVERHRLL

Query:  LDLSSEIQSLFPADFLVGLGGKIKRVRQ
        LDLSSEIQSLFPA+FLVGLGGKIKRVRQ
Subjt:  LDLSSEIQSLFPADFLVGLGGKIKRVRQ

TrEMBL top hitse value%identityAlignment
A0A0A0LY05 Uncharacterized protein4.6e-4883.33Show/hide
Query:  MGLFNSSILLSENDVNAMEFTFLLTYVNSKEEEEEK-------NGSNNLVVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKPRPLTKRKAVERHRLLLD
        MGLFNSSILLSENDVN+MEFTFLL YVNSKE+++E+       NG  +  VEDDDNGFKTPTSLEHKIPTSL+CPMAPRKPKPR LTKRKAVERHRLLLD
Subjt:  MGLFNSSILLSENDVNAMEFTFLLTYVNSKEEEEEK-------NGSNNLVVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKPRPLTKRKAVERHRLLLD

Query:  LSSEIQSLFPADFLVGLGGKIKRVRQ
        LSSEIQSLFPA+FLVGLGGKIKRVRQ
Subjt:  LSSEIQSLFPADFLVGLGGKIKRVRQ

A0A1S4E1K5 cyclin-dependent protein kinase inhibitor SMR3-like2.3e-4782.03Show/hide
Query:  MGL--FNSSILLSENDVNAMEFTFLLTYVNSKEEEEEK-------NGSNNLVVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKPRPLTKRKAVERHRLL
        MGL  FNSSILLSENDVN+MEFTFLL YVNSKE+++E+       NG +N VV+DDDNGFKTPTSLEHKIPTS++CPMAPRKPKPR LTKRKAVERHRLL
Subjt:  MGL--FNSSILLSENDVNAMEFTFLLTYVNSKEEEEEK-------NGSNNLVVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKPRPLTKRKAVERHRLL

Query:  LDLSSEIQSLFPADFLVGLGGKIKRVRQ
        LDLSSEIQSLFPA+FLVGLGGKIKRVRQ
Subjt:  LDLSSEIQSLFPADFLVGLGGKIKRVRQ

A0A2N9ECP2 Uncharacterized protein2.4e-2047.33Show/hide
Query:  MGLFNSSILLSENDVNAMEFTFLL-----------------TYVNSKEEEEEKNGSNNLVV------------EDDDN-GFKTPTSLEHKIPTSLRCPMA
        MG+ +S   LSE D+NAME  FL+                   V  +++EEE++   N+ V            ED+DN GFKTPTSL+HKIP  L+CP A
Subjt:  MGLFNSSILLSENDVNAMEFTFLL-----------------TYVNSKEEEEEKNGSNNLVV------------EDDDN-GFKTPTSLEHKIPTSLRCPMA

Query:  PRKPKPR--PLTKRKAVERHRLLLDLSSEIQSLFPADFLVGLGGKIKRVR
        PRKPKP+  P TKRKA  R R+LLDLS EI+S+FP   LV L GKIK++R
Subjt:  PRKPKPR--PLTKRKAVERHRLLLDLSSEIQSLFPADFLVGLGGKIKRVR

A0A5A7VIY0 Cyclin-dependent protein kinase inhibitor SMR3-like2.3e-4782.03Show/hide
Query:  MGL--FNSSILLSENDVNAMEFTFLLTYVNSKEEEEEK-------NGSNNLVVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKPRPLTKRKAVERHRLL
        MGL  FNSSILLSENDVN+MEFTFLL YVNSKE+++E+       NG +N VV+DDDNGFKTPTSLEHKIPTS++CPMAPRKPKPR LTKRKAVERHRLL
Subjt:  MGL--FNSSILLSENDVNAMEFTFLLTYVNSKEEEEEK-------NGSNNLVVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKPRPLTKRKAVERHRLL

Query:  LDLSSEIQSLFPADFLVGLGGKIKRVRQ
        LDLSSEIQSLFPA+FLVGLGGKIKRVRQ
Subjt:  LDLSSEIQSLFPADFLVGLGGKIKRVRQ

A0A660KRH4 Uncharacterized protein1.5e-2248.97Show/hide
Query:  MGLFNSSILLSENDVNAMEFTFLL-------------TYVNSKEEEEEKNGSNNLV------------VEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPK
        MG+ +S + LSE D+NAMEF FL+               V  +EEEEE+N     +            VEDD++GFKTPTSL+HKIP  L+CP APRKPK
Subjt:  MGLFNSSILLSENDVNAMEFTFLL-------------TYVNSKEEEEEKNGSNNLV------------VEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPK

Query:  PRPLTKRKAVERHRLLLDLSSEIQSLFPADFLVGLG-GKIKRVRQ
          PLTKRKA  R R+LLDLS++I++LFP   L  L  GKIK++R+
Subjt:  PRPLTKRKAVERHRLLLDLSSEIQSLFPADFLVGLG-GKIKRVRQ

SwissProt top hitse value%identityAlignment
Q9LZ60 Cyclin-dependent protein kinase inhibitor SMR36.6e-0446.88Show/hide
Query:  DDDNGFKTPTSLEHKIP--TSLRCPMAPRKPKPRPL--TKRKAVE---RHRLLLDLSSEIQSLF
        +++ G KTPTS +HKIP      CP APRKPKP     TKRK       +R+ +DLS EI+  F
Subjt:  DDDNGFKTPTSLEHKIP--TSLRCPMAPRKPKPRPL--TKRKAVE---RHRLLLDLSSEIQSLF

Arabidopsis top hitse value%identityAlignment
AT5G02420.1 unknown protein4.7e-0546.88Show/hide
Query:  DDDNGFKTPTSLEHKIP--TSLRCPMAPRKPKPRPL--TKRKAVE---RHRLLLDLSSEIQSLF
        +++ G KTPTS +HKIP      CP APRKPKP     TKRK       +R+ +DLS EI+  F
Subjt:  DDDNGFKTPTSLEHKIP--TSLRCPMAPRKPKPRPL--TKRKAVE---RHRLLLDLSSEIQSLF

AT5G59360.1 unknown protein8.0e-0530.68Show/hide
Query:  EEEKNGSNNLVVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKPRPLTKRKA--VERHRLLLDLSSEIQSLFPADFLVGLGGKIKRVR
        ++   G      +D+++  K P +  +        P  PRKPK  P  KR+   V+R  + LD++ E++S+FP   L   G KIK+ R
Subjt:  EEEKNGSNNLVVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKPRPLTKRKA--VERHRLLLDLSSEIQSLFPADFLVGLGGKIKRVR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCTCTTCAATTCAAGTATTTTGCTCTCTGAAAATGATGTAAACGCTATGGAATTCACTTTTCTTCTTACATATGTCAATTCCAAAGAAGAAGAAGAAGAGAAAAA
TGGAAGCAACAACTTAGTTGTTGAAGATGATGACAATGGGTTCAAAACTCCAACATCTTTGGAGCATAAAATTCCCACAAGTCTCCGGTGTCCGATGGCGCCGAGGAAAC
CGAAACCTCGGCCGTTGACGAAGCGGAAGGCGGTGGAACGACACCGTTTGTTGCTGGATCTTTCCTCTGAGATTCAGTCTTTGTTTCCAGCTGATTTTCTTGTAGGCCTT
GGTGGTAAGATCAAGAGGGTTAGACAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCTCTTCAATTCAAGTATTTTGCTCTCTGAAAATGATGTAAACGCTATGGAATTCACTTTTCTTCTTACATATGTCAATTCCAAAGAAGAAGAAGAAGAGAAAAA
TGGAAGCAACAACTTAGTTGTTGAAGATGATGACAATGGGTTCAAAACTCCAACATCTTTGGAGCATAAAATTCCCACAAGTCTCCGGTGTCCGATGGCGCCGAGGAAAC
CGAAACCTCGGCCGTTGACGAAGCGGAAGGCGGTGGAACGACACCGTTTGTTGCTGGATCTTTCCTCTGAGATTCAGTCTTTGTTTCCAGCTGATTTTCTTGTAGGCCTT
GGTGGTAAGATCAAGAGGGTTAGACAATAA
Protein sequenceShow/hide protein sequence
MGLFNSSILLSENDVNAMEFTFLLTYVNSKEEEEEKNGSNNLVVEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKPRPLTKRKAVERHRLLLDLSSEIQSLFPADFLVGL
GGKIKRVRQ