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HG10021939 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021939
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionMannan endo-1,4-beta-mannosidase
Genome locationChr05:18636217..18636555
RNA-Seq ExpressionHG10021939
SyntenyHG10021939
Gene Ontology termsGO:0071704 - organic substance metabolic process (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016985 - mannan endo-1,4-beta-mannosidase activity (molecular function)
InterPro domainsIPR017853 - Glycoside hydrolase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042710.1 major extracellular endoglucanase-like [Cucumis melo var. makuwa]9.8e-4786.67Show/hide
Query:  MFTHYANRTVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFR
        MFT YANRT+EENFDLLDLKQAKAGLA+YN FVLNKTIAE YEAVVDVL A+GLMVIADNH+ QPRWCCSLDDGNGFFGN NFDP++WLQGLSLVA+ FR
Subjt:  MFTHYANRTVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFR

Query:  NKSTV
        NKSTV
Subjt:  NKSTV

KAA0042711.1 major extracellular endoglucanase-like [Cucumis melo var. makuwa]9.8e-4786.67Show/hide
Query:  MFTHYANRTVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFR
        MFT YANRT+EENFDLLDLKQAKAGLA+YN FVLNKTIAE YEAVVDVL A+GLMVIADNH+ QPRWCCSLDDGNGFFGN NFDP++WLQGLSLVA+ FR
Subjt:  MFTHYANRTVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFR

Query:  NKSTV
        NKSTV
Subjt:  NKSTV

KAA0042712.1 major extracellular endoglucanase-like [Cucumis melo var. makuwa]1.3e-4685.71Show/hide
Query:  MFTHYANRTVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFR
        MFT YANRT+EENFDLLDLKQAKAGLA+YN FVLNKTIAE YEAVVD+L A+GLMVIADNH+ QPRWCCSLDDGNGFFGN NFDP++WLQGLSLVA+ FR
Subjt:  MFTHYANRTVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFR

Query:  NKSTV
        NKSTV
Subjt:  NKSTV

KAA0042713.1 major extracellular endoglucanase-like [Cucumis melo var. makuwa]1.3e-4685.71Show/hide
Query:  MFTHYANRTVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFR
        MFT YANRT+EENFDLLDLKQAKAGLA+YN FVLNKTIAE YEAVVD+L A+GLMVIADNH+ QPRWCCSLDDGNGFFGN NFDP++WLQGLSLVA+ FR
Subjt:  MFTHYANRTVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFR

Query:  NKSTV
        NKSTV
Subjt:  NKSTV

XP_008437725.1 PREDICTED: uncharacterized protein LOC103483072 [Cucumis melo]1.8e-4886.92Show/hide
Query:  MFTHYANRTVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFR
        MFT YANRT+EENFDLLDLKQAKAGLA+YN FVLNKTIAE YEAVVDVL A+GLMVIADNH+ QPRWCCSLDDGNGFFGN NFDP++WLQGLSLVA+ FR
Subjt:  MFTHYANRTVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFR

Query:  NKSTVCN
        NKSTVCN
Subjt:  NKSTVCN

TrEMBL top hitse value%identityAlignment
A0A1S3AV94 uncharacterized protein LOC1034830728.6e-4986.92Show/hide
Query:  MFTHYANRTVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFR
        MFT YANRT+EENFDLLDLKQAKAGLA+YN FVLNKTIAE YEAVVDVL A+GLMVIADNH+ QPRWCCSLDDGNGFFGN NFDP++WLQGLSLVA+ FR
Subjt:  MFTHYANRTVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFR

Query:  NKSTVCN
        NKSTVCN
Subjt:  NKSTVCN

A0A5A7TH29 Mannan endo-1,4-beta-mannosidase6.2e-4785.71Show/hide
Query:  MFTHYANRTVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFR
        MFT YANRT+EENFDLLDLKQAKAGLA+YN FVLNKTIAE YEAVVD+L A+GLMVIADNH+ QPRWCCSLDDGNGFFGN NFDP++WLQGLSLVA+ FR
Subjt:  MFTHYANRTVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFR

Query:  NKSTV
        NKSTV
Subjt:  NKSTV

A0A5A7TH83 Mannan endo-1,4-beta-mannosidase4.7e-4786.67Show/hide
Query:  MFTHYANRTVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFR
        MFT YANRT+EENFDLLDLKQAKAGLA+YN FVLNKTIAE YEAVVDVL A+GLMVIADNH+ QPRWCCSLDDGNGFFGN NFDP++WLQGLSLVA+ FR
Subjt:  MFTHYANRTVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFR

Query:  NKSTV
        NKSTV
Subjt:  NKSTV

A0A5A7THG1 Mannan endo-1,4-beta-mannosidase6.2e-4785.71Show/hide
Query:  MFTHYANRTVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFR
        MFT YANRT+EENFDLLDLKQAKAGLA+YN FVLNKTIAE YEAVVD+L A+GLMVIADNH+ QPRWCCSLDDGNGFFGN NFDP++WLQGLSLVA+ FR
Subjt:  MFTHYANRTVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFR

Query:  NKSTV
        NKSTV
Subjt:  NKSTV

A0A5A7TMC9 Mannan endo-1,4-beta-mannosidase4.7e-4786.67Show/hide
Query:  MFTHYANRTVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFR
        MFT YANRT+EENFDLLDLKQAKAGLA+YN FVLNKTIAE YEAVVDVL A+GLMVIADNH+ QPRWCCSLDDGNGFFGN NFDP++WLQGLSLVA+ FR
Subjt:  MFTHYANRTVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFR

Query:  NKSTV
        NKSTV
Subjt:  NKSTV

SwissProt top hitse value%identityAlignment
C0HLA0 Glycosyl hydrolase 5 family protein8.7e-2245.63Show/hide
Query:  THYANRTVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFRNK
        T Y N TV + F  L+L +A +G+   N  +L+      Y  VV  L   G+MVI DNHV +P+WCC++DDGNGFFG+R F+P  W++GL L+A  F N 
Subjt:  THYANRTVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFRNK

Query:  STV
          V
Subjt:  STV

Arabidopsis top hitse value%identityAlignment
AT1G13130.1 Cellulase (glycosyl hydrolase family 5) protein2.7e-1841.41Show/hide
Query:  NRTVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFRNKSTV
        N TV ++F  L L     G    N  +++  + E Y+ VV  L  N +MVI DNH+ +P WCC+ DDGNGFFG++ FDP  W+  L  +A  F   S V
Subjt:  NRTVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFRNKSTV

AT3G26130.1 Cellulase (glycosyl hydrolase family 5) protein1.0e-1738.54Show/hide
Query:  TVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFRNKST
        TV ++     L +A +G   +N  +L+  + + ++ VV  L  + +MVI DNH+ QP WCCS +DGNGFFG+++ +P+ W++GL  +A  F N S+
Subjt:  TVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFRNKST

AT3G26140.1 Cellulase (glycosyl hydrolase family 5) protein9.2e-1941.41Show/hide
Query:  NRTVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFRNKSTV
        N TV ++F  L L    +G    N  +++  + E Y+ VV  L  N +MVI DNHV +P WCC  +DGNGFFG+  FDP  W+ GL+ +A  F+  + V
Subjt:  NRTVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFRNKSTV

AT5G16700.1 Glycosyl hydrolase superfamily protein1.2e-1539.78Show/hide
Query:  TVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFRN
        TV+++F+ L L +   G+  +N  +L+  +   ++ VV  L  NG+MVI DNH+  P WCC  +D + FFG  +FDP  W +GL  +A  FRN
Subjt:  TVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFRN

AT5G17500.1 Glycosyl hydrolase superfamily protein4.3e-1637.37Show/hide
Query:  NRTVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFRNKSTV
        N TV+++F+   L     G+  +N +++N  +   ++AVV  L  + +MVI DNH   P WCCS DD + FFG+  F+P  W+ GL  +A  F N   V
Subjt:  NRTVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFRNKSTV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTACTCACTATGCAAATAGGACGGTTGAAGAAAACTTTGATCTTCTTGATTTAAAACAAGCAAAAGCTGGATTGGCGAAATATAATCATTTTGTGTTGAACAAGAC
TATTGCTGAAACGTATGAGGCTGTTGTTGATGTGTTGCGGGCAAATGGCCTAATGGTCATCGCTGACAATCACGTTGGCCAACCAAGATGGTGTTGCTCTCTTGACGATG
GCAATGGCTTCTTTGGAAACCGCAATTTTGACCCTAAAAAATGGCTACAAGGTCTTAGCTTAGTTGCTCGATGCTTTCGCAACAAATCTACGGTATGTAACATCAAGAGA
TTTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTACTCACTATGCAAATAGGACGGTTGAAGAAAACTTTGATCTTCTTGATTTAAAACAAGCAAAAGCTGGATTGGCGAAATATAATCATTTTGTGTTGAACAAGAC
TATTGCTGAAACGTATGAGGCTGTTGTTGATGTGTTGCGGGCAAATGGCCTAATGGTCATCGCTGACAATCACGTTGGCCAACCAAGATGGTGTTGCTCTCTTGACGATG
GCAATGGCTTCTTTGGAAACCGCAATTTTGACCCTAAAAAATGGCTACAAGGTCTTAGCTTAGTTGCTCGATGCTTTCGCAACAAATCTACGGTATGTAACATCAAGAGA
TTTTCTTAA
Protein sequenceShow/hide protein sequence
MFTHYANRTVEENFDLLDLKQAKAGLAKYNHFVLNKTIAETYEAVVDVLRANGLMVIADNHVGQPRWCCSLDDGNGFFGNRNFDPKKWLQGLSLVARCFRNKSTVCNIKR
FS