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HG10021951 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021951
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr05:18840623..18841882
RNA-Seq ExpressionHG10021951
SyntenyHG10021951
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_009140393.1 uncharacterized protein LOC103864388 [Brassica rapa]1.1e-2064Show/hide
Query:  AMARFWWGSSSGGNKMHWLSWKALCRRKEFGGLGFRDLEDFNQALLAKQAWRILQFPSSLVAPVFKGKYFHSTVF
        AMA FWW  +    K+HW+SWK LC  KE GGLGFRD+EDFNQALLAKQAWR+L  P+SL+A ++KG+YF S+ F
Subjt:  AMARFWWGSSSGGNKMHWLSWKALCRRKEFGGLGFRDLEDFNQALLAKQAWRILQFPSSLVAPVFKGKYFHSTVF

XP_013624835.1 PREDICTED: uncharacterized protein LOC106331016 [Brassica oleracea var. oleracea]4.1e-2062.67Show/hide
Query:  AMARFWWGSSSGGNKMHWLSWKALCRRKEFGGLGFRDLEDFNQALLAKQAWRILQFPSSLVAPVFKGKYFHSTVF
        AMA FWW   S   K+HW+SW  LC  KEFGGLGFRD+EDFNQALLAKQAW++L  P SL+A V++GKY+ +  F
Subjt:  AMARFWWGSSSGGNKMHWLSWKALCRRKEFGGLGFRDLEDFNQALLAKQAWRILQFPSSLVAPVFKGKYFHSTVF

XP_013650556.1 uncharacterized protein LOC106355090 [Brassica napus]3.7e-2164.2Show/hide
Query:  MTRAMARFWWGSSSGGNKMHWLSWKALCRRKEFGGLGFRDLEDFNQALLAKQAWRILQFPSSLVAPVFKGKYFHSTVFGAA
        +T+AMA FWW S     KMHWLSW  LC  KE GGLGF+D++ FNQALLAKQAWRIL  P SL+A VFK +YF ST F +A
Subjt:  MTRAMARFWWGSSSGGNKMHWLSWKALCRRKEFGGLGFRDLEDFNQALLAKQAWRILQFPSSLVAPVFKGKYFHSTVFGAA

XP_018479790.1 PREDICTED: uncharacterized protein LOC108850813 [Raphanus sativus]1.4e-2064Show/hide
Query:  AMARFWWGSSSGGNKMHWLSWKALCRRKEFGGLGFRDLEDFNQALLAKQAWRILQFPSSLVAPVFKGKYFHSTVF
        AMA FWW       K+HW+SWK LC  KE GGLGFRD+EDFNQALLAKQAWR+L  P SL+A ++KG+YF S+ F
Subjt:  AMARFWWGSSSGGNKMHWLSWKALCRRKEFGGLGFRDLEDFNQALLAKQAWRILQFPSSLVAPVFKGKYFHSTVF

XP_022131662.1 uncharacterized protein LOC111004787 [Momordica charantia]4.1e-2051.58Show/hide
Query:  MTRAMARFWWGSSSGGNKMHWLSWKALCRRKEFGGLGFRDLEDFNQALLAKQAWRILQFPSSLVAPVFKGKYFHSTVFGAAIGDGVSATHVPSAS
        +++  ARFWWGSS+   K+HW+SW+ +C  KE GGL FRDLE FNQAL+AKQ WR+LQ P+ LV+ V K KYFH ++        + ATH+ + S
Subjt:  MTRAMARFWWGSSSGGNKMHWLSWKALCRRKEFGGLGFRDLEDFNQALLAKQAWRILQFPSSLVAPVFKGKYFHSTVFGAAIGDGVSATHVPSAS

TrEMBL top hitse value%identityAlignment
A0A6J0L2P1 uncharacterized protein LOC1088248232.6e-2060.26Show/hide
Query:  MTRAMARFWWGSSSGGNKMHWLSWKALCRRKEFGGLGFRDLEDFNQALLAKQAWRILQFPSSLVAPVFKGKYFHSTVF
        +T AMA FWW +  G NKMHW+SW+ +C  KE GG+GF+DLE FNQALLAKQ WR+L  PSSL A V K +Y+ S +F
Subjt:  MTRAMARFWWGSSSGGNKMHWLSWKALCRRKEFGGLGFRDLEDFNQALLAKQAWRILQFPSSLVAPVFKGKYFHSTVF

A0A6J0MMD9 uncharacterized protein LOC1088448732.6e-2061.33Show/hide
Query:  AMARFWWGSSSGGNKMHWLSWKALCRRKEFGGLGFRDLEDFNQALLAKQAWRILQFPSSLVAPVFKGKYFHSTVF
        AMA FWW +    NK+HWLSW  LC  K+ GGLGFRD+EDFNQALLAKQAWR++  P+SL+A ++KG+Y+ S  F
Subjt:  AMARFWWGSSSGGNKMHWLSWKALCRRKEFGGLGFRDLEDFNQALLAKQAWRILQFPSSLVAPVFKGKYFHSTVF

A0A6J0N567 uncharacterized protein LOC1088508136.9e-2164Show/hide
Query:  AMARFWWGSSSGGNKMHWLSWKALCRRKEFGGLGFRDLEDFNQALLAKQAWRILQFPSSLVAPVFKGKYFHSTVF
        AMA FWW       K+HW+SWK LC  KE GGLGFRD+EDFNQALLAKQAWR+L  P SL+A ++KG+YF S+ F
Subjt:  AMARFWWGSSSGGNKMHWLSWKALCRRKEFGGLGFRDLEDFNQALLAKQAWRILQFPSSLVAPVFKGKYFHSTVF

A0A6J1BRN0 uncharacterized protein LOC1110047872.0e-2051.58Show/hide
Query:  MTRAMARFWWGSSSGGNKMHWLSWKALCRRKEFGGLGFRDLEDFNQALLAKQAWRILQFPSSLVAPVFKGKYFHSTVFGAAIGDGVSATHVPSAS
        +++  ARFWWGSS+   K+HW+SW+ +C  KE GGL FRDLE FNQAL+AKQ WR+LQ P+ LV+ V K KYFH ++        + ATH+ + S
Subjt:  MTRAMARFWWGSSSGGNKMHWLSWKALCRRKEFGGLGFRDLEDFNQALLAKQAWRILQFPSSLVAPVFKGKYFHSTVFGAAIGDGVSATHVPSAS

A0A803P9K1 Uncharacterized protein2.1e-2546.58Show/hide
Query:  RAMARFWWGSSSGGNKMHWLSWKALCRRKEFGGLGFRDLEDFNQALLAKQAWRILQFPSSLVAPVFKGKYFHSTVF-----GAAIGDGVSATHVPS----
        + MA FWWG+  G  K+HW SWKALC  K  GGLGFR L+ FNQA+LAKQAWRI    S L+  +FK KYF  T F     G +    +   H  S    
Subjt:  RAMARFWWGSSSGGNKMHWLSWKALCRRKEFGGLGFRDLEDFNQALLAKQAWRILQFPSSLVAPVFKGKYFHSTVF-----GAAIGDGVSATHVPS----

Query:  ------ASVCRLR-WMPPGIDFLKLNVDAAVVPNRVSVGLGAIVRD
              A+ C +  W P  I  LKLNVD A+  +R   G+GAIVRD
Subjt:  ------ASVCRLR-WMPPGIDFLKLNVDAAVVPNRVSVGLGAIVRD

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003103.8e-1647.06Show/hide
Query:  MTRAMARFWWGSSSGGNKMHWLSWKALCRRKE-FGGLGFRDLEDFNQALLAKQAWRILQFPSSLVAPVFKGKYF-HSTVFGAAIG
        +T AM  FWW S     K+ W++W+ LC+ KE  GGLGFRDL  FNQALLAKQ++RI+  P +L++ + + +YF HS++   ++G
Subjt:  MTRAMARFWWGSSSGGNKMHWLSWKALCRRKE-FGGLGFRDLEDFNQALLAKQAWRILQFPSSLVAPVFKGKYF-HSTVFGAAIG

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein2.3e-1650Show/hide
Query:  MARFWWGSSSGGNKMHWLSWKALCRRKEFGGLGFRDLEDFNQALLAKQAWRILQFPSSLVAPVFKGKYFHST
        +A FWW +      MHW +W  L   K  GG+GF+D+E FN ALL KQ WR+L  P SL+A VFK +YFH +
Subjt:  MARFWWGSSSGGNKMHWLSWKALCRRKEFGGLGFRDLEDFNQALLAKQAWRILQFPSSLVAPVFKGKYFHST

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.7e-1747.06Show/hide
Query:  MTRAMARFWWGSSSGGNKMHWLSWKALCRRKE-FGGLGFRDLEDFNQALLAKQAWRILQFPSSLVAPVFKGKYF-HSTVFGAAIG
        +T AM  FWW S     K+ W++W+ LC+ KE  GGLGFRDL  FNQALLAKQ++RI+  P +L++ + + +YF HS++   ++G
Subjt:  MTRAMARFWWGSSSGGNKMHWLSWKALCRRKE-FGGLGFRDLEDFNQALLAKQAWRILQFPSSLVAPVFKGKYF-HSTVFGAAIG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAGAGCTATGGCTCGATTTTGGTGGGGAAGCTCGTCGGGAGGAAACAAGATGCATTGGTTGAGCTGGAAAGCTTTATGCCGGCGTAAGGAGTTTGGTGGTCTTGG
GTTTAGGGATTTGGAGGATTTTAACCAAGCATTGCTTGCGAAACAAGCATGGAGAATCCTTCAGTTTCCTTCTTCGTTGGTGGCTCCTGTGTTTAAGGGGAAATACTTTC
ATTCTACGGTATTCGGAGCAGCGATCGGCGATGGTGTGAGTGCTACTCATGTGCCATCTGCATCTGTGTGCCGTTTAAGGTGGATGCCGCCGGGAATAGATTTCTTGAAG
CTTAACGTGGACGCTGCTGTCGTGCCAAATCGGGTGAGTGTGGGTCTGGGGGCGATAGTTCGTGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTAGAGCTATGGCTCGATTTTGGTGGGGAAGCTCGTCGGGAGGAAACAAGATGCATTGGTTGAGCTGGAAAGCTTTATGCCGGCGTAAGGAGTTTGGTGGTCTTGG
GTTTAGGGATTTGGAGGATTTTAACCAAGCATTGCTTGCGAAACAAGCATGGAGAATCCTTCAGTTTCCTTCTTCGTTGGTGGCTCCTGTGTTTAAGGGGAAATACTTTC
ATTCTACGGTATTCGGAGCAGCGATCGGCGATGGTGTGAGTGCTACTCATGTGCCATCTGCATCTGTGTGCCGTTTAAGGTGGATGCCGCCGGGAATAGATTTCTTGAAG
CTTAACGTGGACGCTGCTGTCGTGCCAAATCGGGTGAGTGTGGGTCTGGGGGCGATAGTTCGTGACTAG
Protein sequenceShow/hide protein sequence
MTRAMARFWWGSSSGGNKMHWLSWKALCRRKEFGGLGFRDLEDFNQALLAKQAWRILQFPSSLVAPVFKGKYFHSTVFGAAIGDGVSATHVPSASVCRLRWMPPGIDFLK
LNVDAAVVPNRVSVGLGAIVRD