CuGenDBv2

Gene ID	HG10021964
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Unknown protein
Genome location	Chr05:19048543..19048956
RNA-Seq Expression	HG10021964
Synteny	HG10021964
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6583459.1 hypothetical protein SDJN03_19391, partial [Cucurbita argyrosperma subsp. sororia]

2.9e-61

91.18

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Query:  MTRMLTFLFCLSSFTFLSIARAEGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSSKDPCGESKCSPLPLAAQVQSTPAQESKYSTTIQKGKHHVGAGRIL
        MT+MLTFLFCLSSFTFLSIA+AEGRAPHGLVYESPVAFSPMAYDFFHPSTQ P++KDPCG SKCSPLPLAAQVQSTPA+ESKYSTTIQKG H VGAG IL
Subjt:  MTRMLTFLFCLSSFTFLSIARAEGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSSKDPCGESKCSPLPLAAQVQSTPAQESKYSTTIQKGKHHVGAGRIL

Query:  GIVFGITFAVFLAMGVYYVLRTRQANANRAKSAQPS
        GIVFGITFAV LAMGVYYVLRTRQANANRA SAQPS
Subjt:  GIVFGITFAVFLAMGVYYVLRTRQANANRAKSAQPS

KAG7019217.1 hypothetical protein SDJN02_18175, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.9e-62

91.91

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Query:  MTRMLTFLFCLSSFTFLSIARAEGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSSKDPCGESKCSPLPLAAQVQSTPAQESKYSTTIQKGKHHVGAGRIL
        MT+MLTFLFCLSSFTFLSIA+AEGRAPHGLVYESPVAFSPMAYDFFHPSTQ P++KDPCG SKCSPLPLAAQVQSTPA+ESKYSTTIQKG H VGAG IL
Subjt:  MTRMLTFLFCLSSFTFLSIARAEGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSSKDPCGESKCSPLPLAAQVQSTPAQESKYSTTIQKGKHHVGAGRIL

Query:  GIVFGITFAVFLAMGVYYVLRTRQANANRAKSAQPS
        GIVFGITFAVFLAMGVYYVLRTRQANANRA SAQPS
Subjt:  GIVFGITFAVFLAMGVYYVLRTRQANANRAKSAQPS

XP_008457527.1 PREDICTED: uncharacterized protein LOC103497198 [Cucumis melo]

7.7e-62

91.3

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Query:  MTRMLTFLFCLSSFTFLSIARAEGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSSKDPCGESKCSPLPLAAQVQSTPAQESKYSTTIQKGKHHVGAGRIL
        MTRMLTFLFCLSSFTFLS+ARA+GRAPHGLVYESPVAFSPMAYDFFHPSTQNP+ KDPCG+SKCSPLPLAAQVQSTPA+ESKYSTTIQ  KH VGAG IL
Subjt:  MTRMLTFLFCLSSFTFLSIARAEGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSSKDPCGESKCSPLPLAAQVQSTPAQESKYSTTIQKGKHHVGAGRIL

Query:  GIVFGITFAVFLAMGVYYVLRTRQANANRAKS-AQPSA
        GIVFGITFAVFLAMGVYYVLRTRQANANRA S AQPSA
Subjt:  GIVFGITFAVFLAMGVYYVLRTRQANANRAKS-AQPSA

XP_011657962.2 uncharacterized protein LOC105435923 [Cucumis sativus]

1.9e-60

89.86

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Query:  MTRMLTFLFCLSSFTFLSIARAEGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSSKDPCGESKCSPLPLAAQVQSTPAQESKYSTTIQKGKHHVGAGRIL
        MTRMLTFLFCL+SFTFLSIA+A+GRAPHGLVYESPVAFSPMAYDFFHPSTQNPS KDPCG+SKCSPLPLAAQVQSTPA+ESKYSTTIQ   H VGAG IL
Subjt:  MTRMLTFLFCLSSFTFLSIARAEGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSSKDPCGESKCSPLPLAAQVQSTPAQESKYSTTIQKGKHHVGAGRIL

Query:  GIVFGITFAVFLAMGVYYVLRTRQANANRAKS-AQPSA
        GIVFGITFAVFL MGVYYVLRTRQANANRA S AQPSA
Subjt:  GIVFGITFAVFLAMGVYYVLRTRQANANRAKS-AQPSA

XP_038876402.1 uncharacterized protein LOC120068840 [Benincasa hispida]

9.5e-60

93.08

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Query:  MTRMLTFLFCLSSFTFLSIARAEGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSSKDPCGESKCSPLPLAAQVQSTPAQESKYSTTIQKGKHHVGAGRIL
        MTRMLTFLFCL+SFTFLSIARA+GRAPHGLVYESPVAFSPMAYDFFHPSTQNP+ KD CGESKCSPLPLAAQVQSTPAQESKYSTTIQKG H VGAG IL
Subjt:  MTRMLTFLFCLSSFTFLSIARAEGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSSKDPCGESKCSPLPLAAQVQSTPAQESKYSTTIQKGKHHVGAGRIL

Query:  GIVFGITFAVFLAMGVYYVLRTRQANANRA
        GIVFGITFAVFLAMGVYYVL TRQANANRA
Subjt:  GIVFGITFAVFLAMGVYYVLRTRQANANRA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LV85 Uncharacterized protein

3.2e-61

90.58

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Query:  MTRMLTFLFCLSSFTFLSIARAEGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSSKDPCGESKCSPLPLAAQVQSTPAQESKYSTTIQKGKHHVGAGRIL
        MTRMLTFLFCL+SFTFLSIARA+GRAPHGLVYESPVAFSPMAYDFFHPSTQNPS KDPCG+SKCSPLPLAAQVQSTPA+ESKYSTTIQ   H VGAG IL
Subjt:  MTRMLTFLFCLSSFTFLSIARAEGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSSKDPCGESKCSPLPLAAQVQSTPAQESKYSTTIQKGKHHVGAGRIL

Query:  GIVFGITFAVFLAMGVYYVLRTRQANANRAKS-AQPSA
        GIVFGITFAVFL MGVYYVLRTRQANANRA S AQPSA
Subjt:  GIVFGITFAVFLAMGVYYVLRTRQANANRAKS-AQPSA

A0A1S3C6E2 uncharacterized protein LOC103497198

3.7e-62

91.3

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Query:  MTRMLTFLFCLSSFTFLSIARAEGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSSKDPCGESKCSPLPLAAQVQSTPAQESKYSTTIQKGKHHVGAGRIL
        MTRMLTFLFCLSSFTFLS+ARA+GRAPHGLVYESPVAFSPMAYDFFHPSTQNP+ KDPCG+SKCSPLPLAAQVQSTPA+ESKYSTTIQ  KH VGAG IL
Subjt:  MTRMLTFLFCLSSFTFLSIARAEGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSSKDPCGESKCSPLPLAAQVQSTPAQESKYSTTIQKGKHHVGAGRIL

Query:  GIVFGITFAVFLAMGVYYVLRTRQANANRAKS-AQPSA
        GIVFGITFAVFLAMGVYYVLRTRQANANRA S AQPSA
Subjt:  GIVFGITFAVFLAMGVYYVLRTRQANANRAKS-AQPSA

A0A5A7SXJ1 Uncharacterized protein

3.7e-62

91.3

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Query:  MTRMLTFLFCLSSFTFLSIARAEGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSSKDPCGESKCSPLPLAAQVQSTPAQESKYSTTIQKGKHHVGAGRIL
        MTRMLTFLFCLSSFTFLS+ARA+GRAPHGLVYESPVAFSPMAYDFFHPSTQNP+ KDPCG+SKCSPLPLAAQVQSTPA+ESKYSTTIQ  KH VGAG IL
Subjt:  MTRMLTFLFCLSSFTFLSIARAEGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSSKDPCGESKCSPLPLAAQVQSTPAQESKYSTTIQKGKHHVGAGRIL

Query:  GIVFGITFAVFLAMGVYYVLRTRQANANRAKS-AQPSA
        GIVFGITFAVFLAMGVYYVLRTRQANANRA S AQPSA
Subjt:  GIVFGITFAVFLAMGVYYVLRTRQANANRAKS-AQPSA

A0A6J1DWP3 uncharacterized protein LOC111025099

6.2e-57

83.21

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Query:  MTRMLTFLFCLSSFTFLSIARAEGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSSKDPCGESKCSPLPLAAQVQSTPAQESKYSTTIQKGKHHVGAGRIL
        MT+MLTFLFCLSS TFLS+ARAEGRAPHGLVYESP+AFSPMAYDFFHPS QN ++KDPC  SKCSPLPLAAQVQSTPAQ+SKYST +QKG+H +GAG +L
Subjt:  MTRMLTFLFCLSSFTFLSIARAEGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSSKDPCGESKCSPLPLAAQVQSTPAQESKYSTTIQKGKHHVGAGRIL

Query:  GIVFGITFAVFLAMGVYYVLRTRQANANRAKSAQPSA
        GIV GI FAVFLAMGVYYVLRTRQANANRA S QP A
Subjt:  GIVFGITFAVFLAMGVYYVLRTRQANANRAKSAQPSA

A0A6J1GD80 uncharacterized protein LOC111452884

1.7e-51

79.56

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Query:  MTRMLTFLFCLSSFTFLSIARAEGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSSKDPCGESKCSPLPLAAQVQSTPAQESKYSTTIQKGKHHVGAGRIL
        M + LTFLF LSSF+FLSI RAEGRAPHGLVYE+PVAFSPMAYDFFHP T++P+++DPCG SKCSPLPLAAQ+QS PAQESKYSTT QKG+   G G IL
Subjt:  MTRMLTFLFCLSSFTFLSIARAEGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSSKDPCGESKCSPLPLAAQVQSTPAQESKYSTTIQKGKHHVGAGRIL

Query:  GIVFGITFAVFLAMGVYYVLRTRQANANRAKSAQPSA
        GIVFGITFAVFLAMGVYYVLRTR AN NRA SA+P A
Subjt:  GIVFGITFAVFLAMGVYYVLRTRQANANRAKSAQPSA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G28410.1 unknown protein

4.6e-20

46.09

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Query:  MTRMLTFLFCLSSFTFLSIARAEGRAPHGLVYESPVAFSPMAYDFFHPSTQNPS-SKDPCGESKCSPLPLAAQVQ--STPAQESKYSTTIQKGKHHVGAG
        MT     +F  SS    + A A+ RAPHGL YE+PVAFSP A+DFFH   +NP  + +PC ES CSPLP+AA+VQ  S  AQES   +     +  +   
Subjt:  MTRMLTFLFCLSSFTFLSIARAEGRAPHGLVYESPVAFSPMAYDFFHPSTQNPS-SKDPCGESKCSPLPLAAQVQ--STPAQESKYSTTIQKGKHHVGAG

Query:  RILGIVFGITFAVFL
         ++GI+FG+ FAV +
Subjt:  RILGIVFGITFAVFL

AT5G60650.1 unknown protein

1.5e-15

38.13

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Query:  MTRMLTFLF-CLSSFTFLSIARAEGRAPHGLVYESPVAFSPMAYDFFHPST-----QNPSSKDPCGESKCSPLPLAAQVQSTPAQESKYS----TTIQKG
        +T  L F F CLS    +SIA +  R  HG  Y +P AFSP AYDFFHP +      NP    P   S  SP P    +    +Q SK S    TT +  
Subjt:  MTRMLTFLF-CLSSFTFLSIARAEGRAPHGLVYESPVAFSPMAYDFFHPST-----QNPSSKDPCGESKCSPLPLAAQVQSTPAQESKYS----TTIQKG

Query:  KHHVGAGRILGIVFGITFAVFLAMGVYYVLRTRQANANR
        +   G G  +G+V G++F  FL++G+Y+V++ ++AN  R
Subjt:  KHHVGAGRILGIVFGITFAVFLAMGVYYVLRTRQANANR

Sequences

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CDS sequence

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ATGACTCGAATGCTTACTTTCCTGTTCTGTCTATCTTCCTTCACATTTCTTTCCATTGCCCGAGCTGAAGGCAGAGCCCCTCATGGCTTGGTATATGAGAGCCCGGTCGC
CTTCTCCCCAATGGCATATGATTTCTTCCATCCAAGCACCCAGAATCCCAGTAGCAAAGACCCATGTGGTGAATCCAAATGCTCCCCCCTTCCCCTTGCAGCACAAGTGC
AATCTACTCCTGCACAAGAAAGCAAATACTCCACCACGATCCAGAAAGGTAAGCACCATGTCGGGGCTGGGAGGATTCTGGGAATTGTGTTTGGCATCACATTTGCTGTG
TTTTTGGCAATGGGAGTGTACTATGTACTACGTACCCGTCAAGCCAACGCAAACCGAGCTAAGTCTGCACAACCTAGCGCTTGA

mRNA sequence

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Protein sequence

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MTRMLTFLFCLSSFTFLSIARAEGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSSKDPCGESKCSPLPLAAQVQSTPAQESKYSTTIQKGKHHVGAGRILGIVFGITFAV
FLAMGVYYVLRTRQANANRAKSAQPSA

HG10021964 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome