; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10021995 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021995
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr05:19463395..19463991
RNA-Seq ExpressionHG10021995
SyntenyHG10021995
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]1.1e-3539.18Show/hide
Query:  MESETLMEEWKKLRLTEEENDTRVDFDPHLDPLIHRHMDHCLIGKLLSSRSIAPGIIRNAFANAWRINLR-FSADSLGKNLFLFKFDSRRDKEMVMNLGP
        M +  L+EEWK  +LT EE+   VD D        + ++  LI KLLS RSI+  +++N    AW+++ + FS D +G N+FLF F+   D+  ++ +GP
Subjt:  MESETLMEEWKKLRLTEEENDTRVDFDPHLDPLIHRHMDHCLIGKLLSSRSIAPGIIRNAFANAWRINLR-FSADSLGKNLFLFKFDSRRDKEMVMNLGP

Query:  WLFDSSLLVLANPKTNVKLSKLAFDKVAFWIRLMDLPLGFQNMFMAKRLGNAVGEFLEVDCDQDNFCWGESLRIKVLVDITKPLRRGVWIEQGG
        W FD +L+++ NP +  K   + F  V+ W+   DL L   N  MA RLGNA+G F +V+ + +NFCWG  LR++V  D+ KPL RG+ +   G
Subjt:  WLFDSSLLVLANPKTNVKLSKLAFDKVAFWIRLMDLPLGFQNMFMAKRLGNAVGEFLEVDCDQDNFCWGESLRIKVLVDITKPLRRGVWIEQGG

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]3.6e-4444.56Show/hide
Query:  MESETLMEEWKKLRLTEEENDTRVDFDPHLDPLIHRHMDHCLIGKLLSSRSIAPGIIRNAFANAWRINLRFSADSLGKNLFLFKFDSRRDKEMVMNLGPW
        M+ E L+ +W+K +LT EE++  +D D     +  + + + L+GKLL+ R I+  ++      AW++  + + +S+GKNLFLF F    D   VM  GPW
Subjt:  MESETLMEEWKKLRLTEEENDTRVDFDPHLDPLIHRHMDHCLIGKLLSSRSIAPGIIRNAFANAWRINLRFSADSLGKNLFLFKFDSRRDKEMVMNLGPW

Query:  LFDSSLLVLANPKTNVKLSKLAFDKVAFWIRLMDLPLGFQNMFMAKRLGNAVGEFLEVDCDQDNFCWGESLRIKVLVDITKPLRRGVWIEQGG
         FD +L+VL  P ++  +S+L F++VAFWI L DLP+ + N  MA RLGNA+G F++VDC++  F WG SLRI+VL+DITKPLRRG+ I   G
Subjt:  LFDSSLLVLANPKTNVKLSKLAFDKVAFWIRLMDLPLGFQNMFMAKRLGNAVGEFLEVDCDQDNFCWGESLRIKVLVDITKPLRRGVWIEQGG

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.6e-3641.24Show/hide
Query:  MESETLMEEWKKLRLTEEENDTRVDFDPHLDPLIHRHMDHCLIGKLLSSRSIAPGIIRNAFANAWRI-NLRFSADSLGKNLFLFKFDSRRDKEMVMNLGP
        M +  L+EEWK  +LT EE +T +D D          ++  L+GKL   R I   +++N    AW++ N  F   SLG NLFLF F    D+  +   GP
Subjt:  MESETLMEEWKKLRLTEEENDTRVDFDPHLDPLIHRHMDHCLIGKLLSSRSIAPGIIRNAFANAWRI-NLRFSADSLGKNLFLFKFDSRRDKEMVMNLGP

Query:  WLFDSSLLVLANPKTNVKLSKLAFDKVAFWIRLMDLPLGFQNMFMAKRLGNAVGEFLEVDCDQDNFCWGESLRIKVLVDITKPLRRGVWIEQGG
        W FD +L+++  P   +  S+L F K+  W+R  DLPLG     MA RLGNA+G F E DCD  N  WG +LR++V++DI+KPLRRG+ +   G
Subjt:  WLFDSSLLVLANPKTNVKLSKLAFDKVAFWIRLMDLPLGFQNMFMAKRLGNAVGEFLEVDCDQDNFCWGESLRIKVLVDITKPLRRGVWIEQGG

XP_024033132.1 uncharacterized protein LOC112095437 [Citrus clementina]2.8e-2836.73Show/hide
Query:  MESETLMEEWKKLRLTEEENDTRVDFDPHLDPLIHRHMDHCLIGKLLSSRSIAPGIIRNAFANAWRINLRFSADSLGKNLFLFKFDSRRDKEMVMNLGPW
        ME+E L+ + + + L  EE D  + F   +     + +  CL+GK+L +R +    ++ A   AWR    F  +SLG N+F+FKF S  DK+ V N GPW
Subjt:  MESETLMEEWKKLRLTEEENDTRVDFDPHLDPLIHRHMDHCLIGKLLSSRSIAPGIIRNAFANAWRINLRFSADSLGKNLFLFKFDSRRDKEMVMNLGPW

Query:  LFDSSLLVLANPKTNVKLSKLAFDKVAFWIRLMDLPLGFQNMFMAKRLGNAVGEFLEVDCDQDNFCWGESLRIKVLVDITKPLRRGVWIEQGGDEE
         FD +L+VL  PK    + K +F  V+FWIR+ ++PL   +  + + LG+ VG+  ++  D    C+GE +RI+V V+ITKPL++ + ++Q  DE+
Subjt:  LFDSSLLVLANPKTNVKLSKLAFDKVAFWIRLMDLPLGFQNMFMAKRLGNAVGEFLEVDCDQDNFCWGESLRIKVLVDITKPLRRGVWIEQGGDEE

XP_042972906.1 uncharacterized protein LOC122304702 [Carya illinoinensis]4.7e-2836.27Show/hide
Query:  LMEEWKKLRLTEEENDTRVDFDPHLDPLIHRHMDHCLIGKLLSSRSIAPGIIRNAFANAWRINLRFSADSLGKNLFLFKFDSRRDKEMVMNLGPWLFDSS
        L E+WKK RLTEEE +  V+     D  I R  +  LIGK+ S RS++  +I N  A  WRI+ R +   + KN F+  F++  D   +++  PW FDS+
Subjt:  LMEEWKKLRLTEEENDTRVDFDPHLDPLIHRHMDHCLIGKLLSSRSIAPGIIRNAFANAWRINLRFSADSLGKNLFLFKFDSRRDKEMVMNLGPWLFDSS

Query:  LLVLANPKTNVKLSKLAFDKVAFWIRLMDLPLGFQNMFMAKRLGNAVGEFLEVDCDQDNFCWGESLRIKVLVDITKPLRRGVWIEQGGDEERQ
        L +L+  +   +     FDK  FW+++ +LPLG  ++    ++G +VG+ +EVD ++D   WG SLR+KV + + K + RG +I    D+ +Q
Subjt:  LLVLANPKTNVKLSKLAFDKVAFWIRLMDLPLGFQNMFMAKRLGNAVGEFLEVDCDQDNFCWGESLRIKVLVDITKPLRRGVWIEQGGDEERQ

TrEMBL top hitse value%identityAlignment
A0A1R3K847 Uncharacterized protein8.7e-2835.48Show/hide
Query:  SETLMEEWKKLRLTEEEN-DTRVDFDPHLDPLIHRHMDHCLIGKLLSSRSIAPGIIRNAFANAWRINLRFSADSLGKNLFLFKFDSRRDKEMVMNLGPWL
        +E L   W+   LT+EE  +  V+     + L    +  CLIGKLLS R++   ++RN     W+++       +G+ L++F+F+S  +KE V   GPW 
Subjt:  SETLMEEWKKLRLTEEEN-DTRVDFDPHLDPLIHRHMDHCLIGKLLSSRSIAPGIIRNAFANAWRINLRFSADSLGKNLFLFKFDSRRDKEMVMNLGPWL

Query:  FDSSLLVLANPKTNVKLSKLAFDKVAFWIRLMDLPLGFQNMFMAKRLGNAVGEFLEVDCDQDNFCWGESLRIKVLVDITKPLRRGV
        F+ +LLVL N    + + ++  +  AFWI++ DLPLGF    + K +G++ GE +E+D   D   WG+ LRI+  +++ KPLRRG+
Subjt:  FDSSLLVLANPKTNVKLSKLAFDKVAFWIRLMDLPLGFQNMFMAKRLGNAVGEFLEVDCDQDNFCWGESLRIKVLVDITKPLRRGV

A0A6J1BSZ1 uncharacterized protein LOC1110054815.1e-3639.18Show/hide
Query:  MESETLMEEWKKLRLTEEENDTRVDFDPHLDPLIHRHMDHCLIGKLLSSRSIAPGIIRNAFANAWRINLR-FSADSLGKNLFLFKFDSRRDKEMVMNLGP
        M +  L+EEWK  +LT EE+   VD D        + ++  LI KLLS RSI+  +++N    AW+++ + FS D +G N+FLF F+   D+  ++ +GP
Subjt:  MESETLMEEWKKLRLTEEENDTRVDFDPHLDPLIHRHMDHCLIGKLLSSRSIAPGIIRNAFANAWRINLR-FSADSLGKNLFLFKFDSRRDKEMVMNLGP

Query:  WLFDSSLLVLANPKTNVKLSKLAFDKVAFWIRLMDLPLGFQNMFMAKRLGNAVGEFLEVDCDQDNFCWGESLRIKVLVDITKPLRRGVWIEQGG
        W FD +L+++ NP +  K   + F  V+ W+   DL L   N  MA RLGNA+G F +V+ + +NFCWG  LR++V  D+ KPL RG+ +   G
Subjt:  WLFDSSLLVLANPKTNVKLSKLAFDKVAFWIRLMDLPLGFQNMFMAKRLGNAVGEFLEVDCDQDNFCWGESLRIKVLVDITKPLRRGVWIEQGG

A0A6J1DU55 uncharacterized protein LOC1110231351.7e-4444.56Show/hide
Query:  MESETLMEEWKKLRLTEEENDTRVDFDPHLDPLIHRHMDHCLIGKLLSSRSIAPGIIRNAFANAWRINLRFSADSLGKNLFLFKFDSRRDKEMVMNLGPW
        M+ E L+ +W+K +LT EE++  +D D     +  + + + L+GKLL+ R I+  ++      AW++  + + +S+GKNLFLF F    D   VM  GPW
Subjt:  MESETLMEEWKKLRLTEEENDTRVDFDPHLDPLIHRHMDHCLIGKLLSSRSIAPGIIRNAFANAWRINLRFSADSLGKNLFLFKFDSRRDKEMVMNLGPW

Query:  LFDSSLLVLANPKTNVKLSKLAFDKVAFWIRLMDLPLGFQNMFMAKRLGNAVGEFLEVDCDQDNFCWGESLRIKVLVDITKPLRRGVWIEQGG
         FD +L+VL  P ++  +S+L F++VAFWI L DLP+ + N  MA RLGNA+G F++VDC++  F WG SLRI+VL+DITKPLRRG+ I   G
Subjt:  LFDSSLLVLANPKTNVKLSKLAFDKVAFWIRLMDLPLGFQNMFMAKRLGNAVGEFLEVDCDQDNFCWGESLRIKVLVDITKPLRRGVWIEQGG

A0A6J1DX30 uncharacterized protein LOC1110248747.9e-3741.24Show/hide
Query:  MESETLMEEWKKLRLTEEENDTRVDFDPHLDPLIHRHMDHCLIGKLLSSRSIAPGIIRNAFANAWRI-NLRFSADSLGKNLFLFKFDSRRDKEMVMNLGP
        M +  L+EEWK  +LT EE +T +D D          ++  L+GKL   R I   +++N    AW++ N  F   SLG NLFLF F    D+  +   GP
Subjt:  MESETLMEEWKKLRLTEEENDTRVDFDPHLDPLIHRHMDHCLIGKLLSSRSIAPGIIRNAFANAWRI-NLRFSADSLGKNLFLFKFDSRRDKEMVMNLGP

Query:  WLFDSSLLVLANPKTNVKLSKLAFDKVAFWIRLMDLPLGFQNMFMAKRLGNAVGEFLEVDCDQDNFCWGESLRIKVLVDITKPLRRGVWIEQGG
        W FD +L+++  P   +  S+L F K+  W+R  DLPLG     MA RLGNA+G F E DCD  N  WG +LR++V++DI+KPLRRG+ +   G
Subjt:  WLFDSSLLVLANPKTNVKLSKLAFDKVAFWIRLMDLPLGFQNMFMAKRLGNAVGEFLEVDCDQDNFCWGESLRIKVLVDITKPLRRGVWIEQGG

A0A803MW53 Uncharacterized protein2.7e-2935.83Show/hide
Query:  ETLMEEWKKLRLTEEENDTRVDFDPHL-DPLIHRHMDHCLIGKLLSSRSIAPGIIRNAFANAWRINLRFSADSLGKNLFLFKFDSRRDKEMVMNLGPWLF
        E+LM++W++L+LT+EEN      D  L + + +  +   L+GKLL+ +S     ++      WRI+   +   +  N+F+F+F +  D++ V+   PW+F
Subjt:  ETLMEEWKKLRLTEEENDTRVDFDPHL-DPLIHRHMDHCLIGKLLSSRSIAPGIIRNAFANAWRINLRFSADSLGKNLFLFKFDSRRDKEMVMNLGPWLF

Query:  DSSLLVLANPKTNVKLSKLAFDKVAFWIRLMDLPLGFQNMFMAKRLGNAVGEFLEVDCDQDNFCWGESLRIKVLVDITKPLRRGVWI
        D+ +L+L       + S+++FD   FWIRL+D+P G ++  +A  +GN +GE ++VD + D  CW E +R+KV+V+I KPLRRG+ I
Subjt:  DSSLLVLANPKTNVKLSKLAFDKVAFWIRLMDLPLGFQNMFMAKRLGNAVGEFLEVDCDQDNFCWGESLRIKVLVDITKPLRRGVWI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G31430.1 unknown protein6.9e-0927.88Show/hide
Query:  FLFKFDSRRDKEMVMNLGPWLFDSSLLVLANPKTNVKLSKLAFDKVAFWIRLMDLPLGFQNMFMAKRLGNAVGEFLEVDCDQDNFCWGESLRIKVLVDIT
        F F F      E V+  GPW F+  +++L   +  + L    F  + FW+++  +P  F N  + + +G A+G+ L+ D + +     +  R+ +  DIT
Subjt:  FLFKFDSRRDKEMVMNLGPWLFDSSLLVLANPKTNVKLSKLAFDKVAFWIRLMDLPLGFQNMFMAKRLGNAVGEFLEVDCDQDNFCWGESLRIKVLVDIT

Query:  KPLR
         PLR
Subjt:  KPLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCTGAAACGTTAATGGAAGAATGGAAAAAACTAAGATTGACTGAAGAGGAGAATGATACCAGAGTTGATTTTGATCCTCATCTAGACCCTTTGATACACAGGCA
TATGGATCATTGTTTAATTGGCAAACTTTTATCTTCTCGATCGATCGCTCCAGGAATTATTCGAAACGCCTTTGCAAATGCTTGGAGAATCAACCTTAGGTTTAGCGCTG
ACAGTCTGGGGAAAAATCTATTCCTCTTTAAGTTCGACTCTCGGAGAGATAAAGAAATGGTTATGAATCTTGGTCCTTGGTTATTCGACAGTTCTCTTCTGGTGTTGGCG
AATCCTAAAACCAATGTCAAATTATCCAAACTAGCATTTGATAAAGTGGCCTTTTGGATCAGATTAATGGACTTACCTCTGGGTTTCCAAAACATGTTCATGGCCAAACG
ATTGGGAAATGCTGTGGGTGAATTTTTAGAAGTCGATTGTGACCAAGATAATTTTTGTTGGGGAGAGAGTTTAAGAATCAAAGTTTTGGTGGATATTACAAAACCGCTAA
GAAGAGGAGTATGGATAGAACAAGGAGGAGATGAAGAAAGACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATCTGAAACGTTAATGGAAGAATGGAAAAAACTAAGATTGACTGAAGAGGAGAATGATACCAGAGTTGATTTTGATCCTCATCTAGACCCTTTGATACACAGGCA
TATGGATCATTGTTTAATTGGCAAACTTTTATCTTCTCGATCGATCGCTCCAGGAATTATTCGAAACGCCTTTGCAAATGCTTGGAGAATCAACCTTAGGTTTAGCGCTG
ACAGTCTGGGGAAAAATCTATTCCTCTTTAAGTTCGACTCTCGGAGAGATAAAGAAATGGTTATGAATCTTGGTCCTTGGTTATTCGACAGTTCTCTTCTGGTGTTGGCG
AATCCTAAAACCAATGTCAAATTATCCAAACTAGCATTTGATAAAGTGGCCTTTTGGATCAGATTAATGGACTTACCTCTGGGTTTCCAAAACATGTTCATGGCCAAACG
ATTGGGAAATGCTGTGGGTGAATTTTTAGAAGTCGATTGTGACCAAGATAATTTTTGTTGGGGAGAGAGTTTAAGAATCAAAGTTTTGGTGGATATTACAAAACCGCTAA
GAAGAGGAGTATGGATAGAACAAGGAGGAGATGAAGAAAGACAATGA
Protein sequenceShow/hide protein sequence
MESETLMEEWKKLRLTEEENDTRVDFDPHLDPLIHRHMDHCLIGKLLSSRSIAPGIIRNAFANAWRINLRFSADSLGKNLFLFKFDSRRDKEMVMNLGPWLFDSSLLVLA
NPKTNVKLSKLAFDKVAFWIRLMDLPLGFQNMFMAKRLGNAVGEFLEVDCDQDNFCWGESLRIKVLVDITKPLRRGVWIEQGGDEERQ