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HG10021997 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021997
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr05:19479053..19479553
RNA-Seq ExpressionHG10021997
SyntenyHG10021997
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652730.1 hypothetical protein Csa_013247 [Cucumis sativus]1.4e-2075.61Show/hide
Query:  MNSNKEQKKRLSELPPRRGLIKIKIFRSIFRTVKSIPEGFARGRREDE----------TLTSTSTTPAPGTSGYNSEAQSES
        MNS K+ +KR +E PPRRGLIKIKIFRSIFRTVKSIPEGFAR RREDE          T TSTSTTPAPGTSGYNSEAQ ES
Subjt:  MNSNKEQKKRLSELPPRRGLIKIKIFRSIFRTVKSIPEGFARGRREDE----------TLTSTSTTPAPGTSGYNSEAQSES

KAG6583473.1 hypothetical protein SDJN03_19405, partial [Cucurbita argyrosperma subsp. sororia]1.5e-0657.35Show/hide
Query:  MNSNKEQKKRLSELPPRRGLIKIKIFRSIFRTVKSIPEGFARGRREDETLTSTSTTPAPGTSGYNSEA
        MNS  +QKKRL+ELPPRRG + I IFRSIF+TVK       R RR           PAPG+SGYNSEA
Subjt:  MNSNKEQKKRLSELPPRRGLIKIKIFRSIFRTVKSIPEGFARGRREDETLTSTSTTPAPGTSGYNSEA

KAG6607199.1 hypothetical protein SDJN03_00541, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1157.89Show/hide
Query:  TSISMNSNKEQKKRLSELPPRRGLIKIKIFRSIFRTVKSIPEGFARGRREDETLTSTSTTPAPGTSGYNSEAQSES
        T +    +K  K+R SELPPRRG I I IF+SIFRT K +PEGF   RR++E+LT +  TPA  +SGYNSE QSES
Subjt:  TSISMNSNKEQKKRLSELPPRRGLIKIKIFRSIFRTVKSIPEGFARGRREDETLTSTSTTPAPGTSGYNSEAQSES

TYK08469.1 hypothetical protein E5676_scaffold74032G00010 [Cucumis melo var. makuwa]6.3e-2691.67Show/hide
Query:  MNSNKEQKKRLSELPPRRGLIKIKIFRSIFRTVKSIPEGFARGRREDETLTSTSTTPAPGTSGYNSEAQSES
        MNSNKE +KR+ E PPRRGLIKIKIFRSIFRTVKSIPEGFAR RREDETLTSTSTTPAPGTSGYNSEAQSES
Subjt:  MNSNKEQKKRLSELPPRRGLIKIKIFRSIFRTVKSIPEGFARGRREDETLTSTSTTPAPGTSGYNSEAQSES

TrEMBL top hitse value%identityAlignment
A0A0A0LV79 Uncharacterized protein1.3e-2181.58Show/hide
Query:  MNSNKEQKKRLSELPPRRGLIKIKIFRSIFRTVKSIPEGFARGRREDE----TLTSTSTTPAPGTSGYNSEAQSES
        MNS K+ +KR +E PPRRGLIKIKIFRSIFRTVKSIPEGFAR RREDE    T TSTSTTPAPGTSGYNSEAQ ES
Subjt:  MNSNKEQKKRLSELPPRRGLIKIKIFRSIFRTVKSIPEGFARGRREDE----TLTSTSTTPAPGTSGYNSEAQSES

A0A5D3CDP6 Uncharacterized protein3.1e-2691.67Show/hide
Query:  MNSNKEQKKRLSELPPRRGLIKIKIFRSIFRTVKSIPEGFARGRREDETLTSTSTTPAPGTSGYNSEAQSES
        MNSNKE +KR+ E PPRRGLIKIKIFRSIFRTVKSIPEGFAR RREDETLTSTSTTPAPGTSGYNSEAQSES
Subjt:  MNSNKEQKKRLSELPPRRGLIKIKIFRSIFRTVKSIPEGFARGRREDETLTSTSTTPAPGTSGYNSEAQSES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCGGAGTGCGAAATCCCCAATTCACCCCTTCTCCCTCTTTAAAATCCCCCTTTTTATTTCATATTCTTTATCGACAATTTTCCAAATTCCCCTTCCTAAAAAAGA
ATTAATATCCCAATTTCCCCAATTTCCCTCTGCTCACACCACTCAGCTGCCGCCCGCCATTCGCCGCCGTCGAATCCGCAGATTCTCGCTGCCTTCTTACTCTTTCACTC
TGCTCCAACCGCTCAAATCTCCATCTCTTCCACCAATTCCACCAATTCGAACCTCAATTTCAATGAATTCGAACAAGGAACAGAAGAAGCGGCTGTCGGAGCTGCCGCCG
AGACGAGGTCTGATCAAGATCAAGATCTTCCGAAGCATCTTCAGGACAGTGAAATCGATACCGGAAGGATTCGCAAGAGGCCGGAGAGAAGACGAAACCCTTACTTCGAC
TTCGACCACGCCGGCTCCGGGTACTAGCGGCTACAACTCGGAAGCTCAGTCCGAGTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGCGGAGTGCGAAATCCCCAATTCACCCCTTCTCCCTCTTTAAAATCCCCCTTTTTATTTCATATTCTTTATCGACAATTTTCCAAATTCCCCTTCCTAAAAAAGA
ATTAATATCCCAATTTCCCCAATTTCCCTCTGCTCACACCACTCAGCTGCCGCCCGCCATTCGCCGCCGTCGAATCCGCAGATTCTCGCTGCCTTCTTACTCTTTCACTC
TGCTCCAACCGCTCAAATCTCCATCTCTTCCACCAATTCCACCAATTCGAACCTCAATTTCAATGAATTCGAACAAGGAACAGAAGAAGCGGCTGTCGGAGCTGCCGCCG
AGACGAGGTCTGATCAAGATCAAGATCTTCCGAAGCATCTTCAGGACAGTGAAATCGATACCGGAAGGATTCGCAAGAGGCCGGAGAGAAGACGAAACCCTTACTTCGAC
TTCGACCACGCCGGCTCCGGGTACTAGCGGCTACAACTCGGAAGCTCAGTCCGAGTCATGA
Protein sequenceShow/hide protein sequence
MLRSAKSPIHPFSLFKIPLFISYSLSTIFQIPLPKKELISQFPQFPSAHTTQLPPAIRRRRIRRFSLPSYSFTLLQPLKSPSLPPIPPIRTSISMNSNKEQKKRLSELPP
RRGLIKIKIFRSIFRTVKSIPEGFARGRREDETLTSTSTTPAPGTSGYNSEAQSES