; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10021998 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10021998
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionYrdC-like domain-containing protein
Genome locationChr05:19499101..19504203
RNA-Seq ExpressionHG10021998
SyntenyHG10021998
Gene Ontology termsGO:0006351 - transcription, DNA-templated (biological process)
GO:0006450 - regulation of translational fidelity (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0000049 - tRNA binding (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0003725 - double-stranded RNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006070 - YrdC-like domain
IPR017945 - DHBP synthase RibB-like alpha/beta domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN64727.2 hypothetical protein Csa_013125 [Cucumis sativus]2.3e-13790.91Show/hide
Query:  MVETLSLIRTFATTFPSSHRGSTNYGLVSFLQQNRGSRVSFPKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSS
        M ++LSLIRTF TTFPSS  GS+NYG+VSFLQ+NRGSRVSF KT WSLEKC MRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACS+
Subjt:  MVETLSLIRTFATTFPSSHRGSTNYGLVSFLQQNRGSRVSFPKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSS

Query:  EAIHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSAN
        EA+HRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGE+S+L+KSLNPGLDSIGVRVPDADFIRLISRRSETALALTSAN
Subjt:  EAIHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSAN

Query:  LSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTERGTYKILRAGSAKEQTVATLERYSLLEEPASI
        LSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTE+GT+KI+RAGSA+EQT+ATLERYSLLE  A+I
Subjt:  LSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTERGTYKILRAGSAKEQTVATLERYSLLEEPASI

XP_004148791.1 yrdC domain-containing protein, mitochondrial isoform X1 [Cucumis sativus]2.3e-13790.91Show/hide
Query:  MVETLSLIRTFATTFPSSHRGSTNYGLVSFLQQNRGSRVSFPKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSS
        M ++LSLIRTF TTFPSS  GS+NYG+VSFLQ+NRGSRVSF KT WSLEKC MRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACS+
Subjt:  MVETLSLIRTFATTFPSSHRGSTNYGLVSFLQQNRGSRVSFPKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSS

Query:  EAIHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSAN
        EA+HRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGE+S+L+KSLNPGLDSIGVRVPDADFIRLISRRSETALALTSAN
Subjt:  EAIHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSAN

Query:  LSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTERGTYKILRAGSAKEQTVATLERYSLLEEPASI
        LSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTE+GT+KI+RAGSA+EQT+ATLERYSLLE  A+I
Subjt:  LSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTERGTYKILRAGSAKEQTVATLERYSLLEEPASI

XP_008465284.1 PREDICTED: yrdC domain-containing protein, mitochondrial [Cucumis melo]1.2e-13589.09Show/hide
Query:  MVETLSLIRTFATTFPSSHRGSTNYGLVSFLQQNRGSRVSFPKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSS
        M ++LSLIRTFA TFPSSH GS+NYG+VSFLQ+NRGSRVSF KT WSLEKC M VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACS+
Subjt:  MVETLSLIRTFATTFPSSHRGSTNYGLVSFLQQNRGSRVSFPKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSS

Query:  EAIHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSAN
        EA+HRIYEIKGRKLTSPLAICVG VSDITR+A+TDHLPSGLLDSLLPGPVTVVLKRGE+S+L+KSLNPGLDSIGVRVPDADFIRLISRRSETALALTSAN
Subjt:  EAIHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSAN

Query:  LSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTERGTYKILRAGSAKEQTVATLERYSLLEEPASI
        LSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTI+DLTERGT+KI+RAGSA++QT+ATL+RYSLLE  A+I
Subjt:  LSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTERGTYKILRAGSAKEQTVATLERYSLLEEPASI

XP_023521571.1 yrdC domain-containing protein, mitochondrial-like [Cucurbita pepo subsp. pepo]7.5e-13389.78Show/hide
Query:  MVETLSLIRTFATTFPSSHRGSTNYGLVSFLQQNRGSRVSFPKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSS
        MVE LSLIRTFA TFPSS  G+ NYG VSFL  NRGSR++FPKT WSLEKCSMRVEN LQALRPASEAFAQEAT+ALKAGKVIAVPTDTLYGLACDACSS
Subjt:  MVETLSLIRTFATTFPSSHRGSTNYGLVSFLQQNRGSRVSFPKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSS

Query:  EAIHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSAN
        EA++RIYEIKGRKLTSPLAICVGDVSDITRFAV DHLP GLLDSLLPGPVTVVLKRGE+SILEKSLNPGL+SIGVRVPDADFIRLISRRS TALALTSAN
Subjt:  EAIHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSAN

Query:  LSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTERGTYKILRAGSAKEQTVATLERYSLLEEPAS
        LSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLT+RGT+KI+RAGSAKEQTVATL+RYSLLE+  S
Subjt:  LSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTERGTYKILRAGSAKEQTVATLERYSLLEEPAS

XP_038893581.1 yrdC domain-containing protein, mitochondrial isoform X1 [Benincasa hispida]5.6e-14496.73Show/hide
Query:  MVETLSLIRTFATTFPSSHRGSTNYGLVSFLQQNRGSRVSFPKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSS
        MVE+LSLIRTF  TFPSSH GS NYGLVSFLQQNRGSRVSFPKTTWSLEKC MRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSS
Subjt:  MVETLSLIRTFATTFPSSHRGSTNYGLVSFLQQNRGSRVSFPKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSS

Query:  EAIHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSAN
        EA+HRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSAN
Subjt:  EAIHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSAN

Query:  LSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTERGTYKILRAGSAKEQTVATLERYSLLEEPASI
        LSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTERGTYKILRAGSAKEQTVA LERYSLLEE ASI
Subjt:  LSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTERGTYKILRAGSAKEQTVATLERYSLLEEPASI

TrEMBL top hitse value%identityAlignment
A0A0A0LUP4 YrdC-like domain-containing protein1.1e-13790.91Show/hide
Query:  MVETLSLIRTFATTFPSSHRGSTNYGLVSFLQQNRGSRVSFPKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSS
        M ++LSLIRTF TTFPSS  GS+NYG+VSFLQ+NRGSRVSF KT WSLEKC MRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACS+
Subjt:  MVETLSLIRTFATTFPSSHRGSTNYGLVSFLQQNRGSRVSFPKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSS

Query:  EAIHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSAN
        EA+HRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGE+S+L+KSLNPGLDSIGVRVPDADFIRLISRRSETALALTSAN
Subjt:  EAIHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSAN

Query:  LSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTERGTYKILRAGSAKEQTVATLERYSLLEEPASI
        LSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTE+GT+KI+RAGSA+EQT+ATLERYSLLE  A+I
Subjt:  LSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTERGTYKILRAGSAKEQTVATLERYSLLEEPASI

A0A1S3CNI2 yrdC domain-containing protein, mitochondrial6.0e-13689.09Show/hide
Query:  MVETLSLIRTFATTFPSSHRGSTNYGLVSFLQQNRGSRVSFPKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSS
        M ++LSLIRTFA TFPSSH GS+NYG+VSFLQ+NRGSRVSF KT WSLEKC M VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACS+
Subjt:  MVETLSLIRTFATTFPSSHRGSTNYGLVSFLQQNRGSRVSFPKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSS

Query:  EAIHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSAN
        EA+HRIYEIKGRKLTSPLAICVG VSDITR+A+TDHLPSGLLDSLLPGPVTVVLKRGE+S+L+KSLNPGLDSIGVRVPDADFIRLISRRSETALALTSAN
Subjt:  EAIHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSAN

Query:  LSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTERGTYKILRAGSAKEQTVATLERYSLLEEPASI
        LSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTI+DLTERGT+KI+RAGSA++QT+ATL+RYSLLE  A+I
Subjt:  LSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTERGTYKILRAGSAKEQTVATLERYSLLEEPASI

A0A5A7T5W1 YrdC domain-containing protein6.0e-13689.09Show/hide
Query:  MVETLSLIRTFATTFPSSHRGSTNYGLVSFLQQNRGSRVSFPKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSS
        M ++LSLIRTFA TFPSSH GS+NYG+VSFLQ+NRGSRVSF KT WSLEKC M VENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACS+
Subjt:  MVETLSLIRTFATTFPSSHRGSTNYGLVSFLQQNRGSRVSFPKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSS

Query:  EAIHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSAN
        EA+HRIYEIKGRKLTSPLAICVG VSDITR+A+TDHLPSGLLDSLLPGPVTVVLKRGE+S+L+KSLNPGLDSIGVRVPDADFIRLISRRSETALALTSAN
Subjt:  EAIHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSAN

Query:  LSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTERGTYKILRAGSAKEQTVATLERYSLLEEPASI
        LSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTI+DLTERGT+KI+RAGSA++QT+ATL+RYSLLE  A+I
Subjt:  LSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTERGTYKILRAGSAKEQTVATLERYSLLEEPASI

A0A6J1G9Z7 yrdC domain-containing protein, mitochondrial9.0e-13288.69Show/hide
Query:  MVETLSLIRTFATTFPSSHRGSTNYGLVSFLQQNRGSRVSFPKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSS
        MVE LS+IRTFA TFPSS  G+ +YG VSFL  NRGSR++FPKT WSLEKCSMRVEN LQALRPASEAFAQEA +ALKAGKVIAVPTDTLYGLACDACSS
Subjt:  MVETLSLIRTFATTFPSSHRGSTNYGLVSFLQQNRGSRVSFPKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSS

Query:  EAIHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSAN
        EA++RIYEIKGRKLTSPLAICVGDVSDITRFAV DHLP GLLDSLLPGPVTVVLKRGE+SILEKSLNPGL+SIGVRVPDADFIRLISRRS TALALTSAN
Subjt:  EAIHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSAN

Query:  LSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTERGTYKILRAGSAKEQTVATLERYSLLEEPAS
        LSGQPSSVCV+DFENLWQHCAYVYDGG+LPAGRAGSTIIDLT+RGT+KI+RAGSAKEQTVATLERYSLLEE  S
Subjt:  LSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTERGTYKILRAGSAKEQTVATLERYSLLEEPAS

A0A6J1KDV4 yrdC domain-containing protein, mitochondrial8.1e-13389.78Show/hide
Query:  MVETLSLIRTFATTFPSSHRGSTNYGLVSFLQQNRGSRVSFPKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSS
        MVE LSLIRTFA TFPSS  G+ NYG VSFL  NRGSR++FPKT WSLEKCSMRVEN LQALRPASEAFAQEAT+ALKAGKVIAVPTDTLYGLACDACSS
Subjt:  MVETLSLIRTFATTFPSSHRGSTNYGLVSFLQQNRGSRVSFPKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSS

Query:  EAIHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSAN
        EA++RIYEIKGRKLTSPLAICVGDVSDITRFAV DHLP GLLDSLLPGPVTVVLKRGE+SILEKSLNPGL+SIGVRVPDADFIRLISRRS TALALTSAN
Subjt:  EAIHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSAN

Query:  LSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTERGTYKILRAGSAKEQTVATLERYSLLEEPAS
        LSG+PSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLT+RG +KI+RAGSAKEQTVATLERYSLLEE  S
Subjt:  LSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTERGTYKILRAGSAKEQTVATLERYSLLEEPAS

SwissProt top hitse value%identityAlignment
Q0VC80 YrdC domain-containing protein, mitochondrial9.5e-4647.34Show/hide
Query:  ATDALKAGKVIAVPTDTLYGLACDACSSEAIHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDS
        A   L+AG V+AVPTDTLYGLAC A  SEA+  +Y +KGR  T PLA+C+G V+D+ R+     +P GLL  LLPGPVT+V++R E   L K LNP    
Subjt:  ATDALKAGKVIAVPTDTLYGLACDACSSEAIHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDS

Query:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIIDLTERGTYKILRAGSAKEQTVATLERYS
        +G+R+PD  F++ +++     LALTSANLS Q SS+ V +F++LW H + + DGG +     P  R GST++DL+  G + I+R G A E T A L+ Y 
Subjt:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIIDLTERGTYKILRAGSAKEQTVATLERYS

Query:  LLEEPAS
        LL    S
Subjt:  LLEEPAS

Q3U5F4 YrdC domain-containing protein, mitochondrial1.7e-4245.67Show/hide
Query:  ATDALKAGKVIAVPTDTLYGLACDACSSEAIHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDS
        A   L+AG V+AVPTDTLYGLAC A SS A+  +Y +KGR    PLA+C+G V+D+ R+     +P  LL+ L PGPVT+V++R E   L K LNP    
Subjt:  ATDALKAGKVIAVPTDTLYGLACDACSSEAIHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDS

Query:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIIDLTERGTYKILRAGSAKEQTVATL-ERY
        +G+R+PD  F+  +++     LALTSANLS Q SS+ V +F++LW H + V DGG +     P  R GST++DL+  G + I+R G A E T + L ++Y
Subjt:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIIDLTERGTYKILRAGSAKEQTVATL-ERY

Query:  SLLEEPAS
         LL    S
Subjt:  SLLEEPAS

Q499R4 YrdC domain-containing protein, mitochondrial1.3e-4245.67Show/hide
Query:  ATDALKAGKVIAVPTDTLYGLACDACSSEAIHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDS
        A   L+AG V+AVPTDTLYGLAC A  S A+  +Y +KGR    PLA+C+G V+D+ R+     +P  LL+ L PGPVT+V++R E   L K LNP    
Subjt:  ATDALKAGKVIAVPTDTLYGLACDACSSEAIHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDS

Query:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIIDLTERGTYKILRAGSAKEQTVATLE-RY
        +G+R+PD  F+  +++     LALTSANLS Q SS+ V +F++LW H + V DGG +     P  R GST++DL+  G + I+R+G A E T A L+ +Y
Subjt:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIIDLTERGTYKILRAGSAKEQTVATLE-RY

Query:  SLLEEPAS
         LL    S
Subjt:  SLLEEPAS

Q60369 Putative threonylcarbamoyl-AMP synthase7.3e-2235.93Show/hide
Query:  GKVIAVPTDTLYGLACDACSSEAIHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKR--GEASILEKSLNPGLDSIGVRV
        GK++   TDTLYG++ +A + +A+ ++Y IK R+   PL+ICV D ++I ++A  + L   ++D  LPGP+T++LK+  G   I+ K      D IG+R+
Subjt:  GKVIAVPTDTLYGLACDACSSEAIHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKR--GEASILEKSLNPGLDSIGVRV

Query:  PDADFIRLISRRSETALALTSANLSGQPSSVCVNDFE-NLWQHCAYVYDGGVLPAGRAGSTIIDLTE
        PD   IR +   S   L  TSAN+SG+ S   V++ +  + +   YV D G     +  STII + +
Subjt:  PDADFIRLISRRSETALALTSANLSGQPSSVCVNDFE-NLWQHCAYVYDGGVLPAGRAGSTIIDLTE

Q86U90 YrdC domain-containing protein, mitochondrial6.8e-4447.12Show/hide
Query:  ATDALKAGKVIAVPTDTLYGLACDACSSEAIHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDS
        A   L+AG V+AVPTDTLYGLAC A  S A+  +Y +KGR    PLA+C+G V+D+ R+     +P GLL  LLPGPVT+V++R E   L K LNP    
Subjt:  ATDALKAGKVIAVPTDTLYGLACDACSSEAIHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDS

Query:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIIDLTERGTYKILRAGSAKEQTVATL-ERY
        +G+R+PD  F++ +++  E  LALTSANLS Q SS+ V +F++LW   + V DGG +     P  R GST++DL+  G + I+R G A E T A L ++Y
Subjt:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVL-----PAGRAGSTIIDLTERGTYKILRAGSAKEQTVATL-ERY

Query:  SLLEEPAS
         LL   AS
Subjt:  SLLEEPAS

Arabidopsis top hitse value%identityAlignment
AT3G01920.1 DHBP synthase RibB-like alpha/beta domain3.5e-1126.59Show/hide
Query:  TTFPSSHRGSTNYGLVSFLQQNRGSRVSF--PKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSSEAIHRIYEIK
        +T PS+   S    +V+   +    R+ +  P+ T   E   + V+ C            Q   D LK G V  +PTDT+Y +ACD  +  A+ R+  IK
Subjt:  TTFPSSHRGSTNYGLVSFLQQNRGSRVSF--PKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSSEAIHRIYEIK

Query:  GRKLTSPLAICVGDVSDITRFAVTDHLPSG----------LLDSLLPGPVTVVLKRGEASILEKSLNPGLDS--------IGVRVPDADFIRLISRRSET
          + + PL+I    + DI  F  T   P G           +   LPGP T +L   +  + ++ +  G  S        +GVR+ D    + I ++ + 
Subjt:  GRKLTSPLAICVGDVSDITRFAVTDHLPSG----------LLDSLLPGPVTVVLKRGEASILEKSLNPGLDS--------IGVRVPDADFIRLISRRSET

Query:  ALALTSANLSGQPSSVCVNDFENLW-----QHCAYVYDGGVLPAGRAGSTIIDLTERGTY-KILRAG
         L  TS  + G   +  + D   +      +   +V DGG+  A    STI+D+T  G Y K++R G
Subjt:  ALALTSANLSGQPSSVCVNDFENLW-----QHCAYVYDGGVLPAGRAGSTIIDLTERGTY-KILRAG

AT5G60590.1 DHBP synthase RibB-like alpha/beta domain6.1e-4059.59Show/hide
Query:  ATTFPSSHRGSTNYGLVSFLQQNRGSRVSF-PKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSSEAIHRIYEIK
        A + P   +G +     S   Q+R  R     K  WSLE+    V +    + PA+EA+AQEA +A+K+ KVIAVPTDTLYG ACDACS EA+ RIYEIK
Subjt:  ATTFPSSHRGSTNYGLVSFLQQNRGSRVSF-PKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSSEAIHRIYEIK

Query:  GRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKR
        GRKLTSPLAICVGDV DI R A T HLP GLLDSLLPGPVT+VL+R
Subjt:  GRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKR

AT5G60590.2 DHBP synthase RibB-like alpha/beta domain5.3e-9266.28Show/hide
Query:  ATTFPSSHRGSTNYGLVSFLQQNRGSRVSF-PKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSSEAIHRIYEIK
        A + P   +G +     S   Q+R  R     K  WSLE+    V +    + PA+EA+AQEA +A+K+ KVIAVPTDTLYG ACDACS EA+ RIYEIK
Subjt:  ATTFPSSHRGSTNYGLVSFLQQNRGSRVSF-PKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSSEAIHRIYEIK

Query:  GRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCV
        GRKLTSPLAICVGDV DI R A T HLP GLLDSLLPGPVT+VL+RGE+SILEKSLNPG+ +IGVRVPD +FIR +SR S + LALTSANLSG  SSVCV
Subjt:  GRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCV

Query:  NDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTERGTYKILRAGSAKEQTVATLERYSLLEE
         DFENLWQHCAYVYDGG+LP+GRAGSTI+DLT+ G YKI+R GSAK+ TVA LE+Y L EE
Subjt:  NDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTERGTYKILRAGSAKEQTVATLERYSLLEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGAGACTCTCTCTCTAATCAGAACGTTTGCGACTACTTTTCCCTCTTCTCACCGAGGATCTACCAATTATGGGCTAGTTTCGTTCTTGCAACAAAATAGAGGATC
AAGGGTGAGTTTTCCTAAAACGACATGGAGTTTGGAAAAATGTAGTATGCGGGTTGAGAATTGTTTGCAAGCACTTCGTCCTGCCTCTGAAGCTTTTGCTCAAGAGGCTA
CAGATGCTCTTAAAGCTGGGAAGGTTATTGCGGTCCCTACTGATACTCTCTATGGACTCGCTTGTGACGCTTGTTCTTCTGAAGCAATCCATAGGATTTATGAAATTAAA
GGACGTAAACTTACAAGCCCTCTCGCCATTTGTGTTGGTGATGTCTCTGACATAACTCGTTTTGCTGTCACAGACCATTTGCCTTCTGGTTTGCTTGATTCTCTCCTTCC
TGGGCCTGTAACTGTTGTACTGAAAAGAGGTGAGGCGAGTATTCTTGAGAAGTCTTTGAACCCTGGATTGGACAGTATCGGAGTCCGTGTACCTGATGCTGACTTTATTC
GGCTTATTTCTCGTAGATCAGAGACAGCATTGGCCCTTACAAGTGCTAATTTAAGTGGACAACCAAGCAGTGTTTGTGTTAATGACTTTGAAAACCTATGGCAACACTGT
GCTTATGTATACGATGGTGGTGTTCTTCCTGCTGGACGAGCGGGCTCGACGATCATTGACCTCACCGAGCGTGGCACATATAAGATTCTCAGAGCTGGAAGTGCAAAGGA
GCAAACTGTTGCAACACTTGAAAGGTATTCACTATTAGAAGAACCAGCTAGCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGAGACTCTCTCTCTAATCAGAACGTTTGCGACTACTTTTCCCTCTTCTCACCGAGGATCTACCAATTATGGGCTAGTTTCGTTCTTGCAACAAAATAGAGGATC
AAGGGTGAGTTTTCCTAAAACGACATGGAGTTTGGAAAAATGTAGTATGCGGGTTGAGAATTGTTTGCAAGCACTTCGTCCTGCCTCTGAAGCTTTTGCTCAAGAGGCTA
CAGATGCTCTTAAAGCTGGGAAGGTTATTGCGGTCCCTACTGATACTCTCTATGGACTCGCTTGTGACGCTTGTTCTTCTGAAGCAATCCATAGGATTTATGAAATTAAA
GGACGTAAACTTACAAGCCCTCTCGCCATTTGTGTTGGTGATGTCTCTGACATAACTCGTTTTGCTGTCACAGACCATTTGCCTTCTGGTTTGCTTGATTCTCTCCTTCC
TGGGCCTGTAACTGTTGTACTGAAAAGAGGTGAGGCGAGTATTCTTGAGAAGTCTTTGAACCCTGGATTGGACAGTATCGGAGTCCGTGTACCTGATGCTGACTTTATTC
GGCTTATTTCTCGTAGATCAGAGACAGCATTGGCCCTTACAAGTGCTAATTTAAGTGGACAACCAAGCAGTGTTTGTGTTAATGACTTTGAAAACCTATGGCAACACTGT
GCTTATGTATACGATGGTGGTGTTCTTCCTGCTGGACGAGCGGGCTCGACGATCATTGACCTCACCGAGCGTGGCACATATAAGATTCTCAGAGCTGGAAGTGCAAAGGA
GCAAACTGTTGCAACACTTGAAAGGTATTCACTATTAGAAGAACCAGCTAGCATTTGA
Protein sequenceShow/hide protein sequence
MVETLSLIRTFATTFPSSHRGSTNYGLVSFLQQNRGSRVSFPKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSSEAIHRIYEIK
GRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHC
AYVYDGGVLPAGRAGSTIIDLTERGTYKILRAGSAKEQTVATLERYSLLEEPASI