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HG10022007 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10022007
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr05:19627157..19627603
RNA-Seq ExpressionHG10022007
SyntenyHG10022007
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MQL77781.1 hypothetical protein [Colocasia esculenta]1.3e-1747.46Show/hide
Query:  GQRSTKRRRMEDRGSPRPRSRSPRRRPRSPPRGPTSKFGKYTPTVISPDKILMEIQHTNLLKYPGRIRSNPDKRDRDRYCMYHQDHGHFTKECKQLKDDI
        G++S K +R  D GS R R +  RR   SP R     F  YTP  ++P++IL EI++   L++P R+RS+P KRD+++YC +H+DHGH T EC+QLKD+I
Subjt:  GQRSTKRRRMEDRGSPRPRSRSPRRRPRSPPRGPTSKFGKYTPTVISPDKILMEIQHTNLLKYPGRIRSNPDKRDRDRYCMYHQDHGHFTKECKQLKDDI

Query:  EALILNGYLKEFVEKDEK
        E LI  GYL  FV ++E+
Subjt:  EALILNGYLKEFVEKDEK

MQL96670.1 hypothetical protein [Colocasia esculenta]1.3e-1746.61Show/hide
Query:  GQRSTKRRRMEDRGSPRPRSRSPRRRPRSPPRGPTSKFGKYTPTVISPDKILMEIQHTNLLKYPGRIRSNPDKRDRDRYCMYHQDHGHFTKECKQLKDDI
        G++S K +R  D GS R R +   RR    PR P   F  YTP  ++P++IL EI++   +++P R+RS+P KRD+++YC +H+DHGH T EC+QLKD+I
Subjt:  GQRSTKRRRMEDRGSPRPRSRSPRRRPRSPPRGPTSKFGKYTPTVISPDKILMEIQHTNLLKYPGRIRSNPDKRDRDRYCMYHQDHGHFTKECKQLKDDI

Query:  EALILNGYLKEFVEKDEK
        E LI  GYL  FV ++E+
Subjt:  EALILNGYLKEFVEKDEK

MQM14562.1 hypothetical protein [Colocasia esculenta]5.7e-1846.61Show/hide
Query:  GQRSTKRRRMEDRGSPRPRSRSPRRRPRSPPRGPTSKFGKYTPTVISPDKILMEIQHTNLLKYPGRIRSNPDKRDRDRYCMYHQDHGHFTKECKQLKDDI
        G++S K +R  D GS R R +   RR    PR P   F  YTP  ++P++IL EI++   +++P R+RS+P KRD+++YC +H+DHGH T EC+QLKD+I
Subjt:  GQRSTKRRRMEDRGSPRPRSRSPRRRPRSPPRGPTSKFGKYTPTVISPDKILMEIQHTNLLKYPGRIRSNPDKRDRDRYCMYHQDHGHFTKECKQLKDDI

Query:  EALILNGYLKEFVEKDEK
        E LI  GYL+ FV ++E+
Subjt:  EALILNGYLKEFVEKDEK

MQM18035.1 hypothetical protein [Colocasia esculenta]2.8e-1746.61Show/hide
Query:  GQRSTKRRRMEDRGSPRPRSRSPRRRPRSPPRGPTSKFGKYTPTVISPDKILMEIQHTNLLKYPGRIRSNPDKRDRDRYCMYHQDHGHFTKECKQLKDDI
        G++S K+R  E+ GS R R +   RR    PR P   F  YTP  ++P++IL EI++   +++P R+RS+P KRD+++YC +H+DHGH T EC+QLKD+I
Subjt:  GQRSTKRRRMEDRGSPRPRSRSPRRRPRSPPRGPTSKFGKYTPTVISPDKILMEIQHTNLLKYPGRIRSNPDKRDRDRYCMYHQDHGHFTKECKQLKDDI

Query:  EALILNGYLKEFVEKDEK
        E LI  GYL  FV ++E+
Subjt:  EALILNGYLKEFVEKDEK

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.8e-1742.02Show/hide
Query:  RDHIGQRSTKRRRMEDRGSPRPRSRSPRRRPRSPPRGPTSKFGKYTPTVISPDKILMEIQHTNLLKYPGRIRSNPDKRDRDRYCMYHQDHGHFTKECKQL
        R+  G+R+  +R   +R   +P+     +R RS  + P  KF KYTPT +  +++LMEI+   LLK+P R++++  KR + RYC++H+DHGH T++C  L
Subjt:  RDHIGQRSTKRRRMEDRGSPRPRSRSPRRRPRSPPRGPTSKFGKYTPTVISPDKILMEIQHTNLLKYPGRIRSNPDKRDRDRYCMYHQDHGHFTKECKQL

Query:  KDDIEALILNGYLKEFVEK
        K+++E LI  GYLKE+VE+
Subjt:  KDDIEALILNGYLKEFVEK

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128052.3e-1742.02Show/hide
Query:  RDHIGQRSTKRRRMEDRGSPRPRSRSPRRRPRSPPRGPTSKFGKYTPTVISPDKILMEIQHTNLLKYPGRIRSNPDKRDRDRYCMYHQDHGHFTKECKQL
        R+  G+R+ ++R   +R   +P+     +R RS  + P  KF KYT T +  +++LMEI++  LLK+P R+ ++  KR + RYC++H DHGH T++C  L
Subjt:  RDHIGQRSTKRRRMEDRGSPRPRSRSPRRRPRSPPRGPTSKFGKYTPTVISPDKILMEIQHTNLLKYPGRIRSNPDKRDRDRYCMYHQDHGHFTKECKQL

Query:  KDDIEALILNGYLKEFVEK
        K+++E LIL GYLKE+VE+
Subjt:  KDDIEALILNGYLKEFVEK

A0A6J1DWY0 uncharacterized protein LOC1110252931.4e-1742.02Show/hide
Query:  RDHIGQRSTKRRRMEDRGSPRPRSRSPRRRPRSPPRGPTSKFGKYTPTVISPDKILMEIQHTNLLKYPGRIRSNPDKRDRDRYCMYHQDHGHFTKECKQL
        R+  G+R+  +R   +R   +P+     +R RS  + P  KF KYTPT +  +++LMEI+   LLK+P R++++  KR + RYC++H+DHGH T++C  L
Subjt:  RDHIGQRSTKRRRMEDRGSPRPRSRSPRRRPRSPPRGPTSKFGKYTPTVISPDKILMEIQHTNLLKYPGRIRSNPDKRDRDRYCMYHQDHGHFTKECKQL

Query:  KDDIEALILNGYLKEFVEK
        K+++E LI  GYLKE+VE+
Subjt:  KDDIEALILNGYLKEFVEK

A0A7J0EST1 Ribonuclease H9.8e-1638.46Show/hide
Query:  MGVEELIKSKKEAHERGTRVGHSYDRDHIGQRSTKRRRMEDRGSPRPRSRSPRRRPRSPPRGPTSKFGKYTPTVISP-DKILMEIQHTNLLKYPGRIRSN
        + VEEL K+K+    +        D   I  R   R +  DR       RS  RRPR+PPR P        P + +P  ++L+EI+H   +K+PG+I+++
Subjt:  MGVEELIKSKKEAHERGTRVGHSYDRDHIGQRSTKRRRMEDRGSPRPRSRSPRRRPRSPPRGPTSKFGKYTPTVISP-DKILMEIQHTNLLKYPGRIRSN

Query:  PDKRDRDRYCMYHQDHGHFTKECKQLKDDIEALILNGYLKEFV
        P KR+R++YC +H+DHGH T++C QLK+ I  LI  GYL+++V
Subjt:  PDKRDRDRYCMYHQDHGHFTKECKQLKDDIEALILNGYLKEFV

A0A7J0FL66 Retrotrans_gag domain-containing protein8.3e-1535.66Show/hide
Query:  MGVEELIKSKKEAHERGTRVGHSYDRDHIGQRSTKRRRMEDRGSPRPRSRSPRRRPRSPPRGPTSKFGKYTPTVISP-DKILMEIQHTNLLKYPGRIRSN
        +  EEL ++K+    +        D   +  R   R +  DR S     RS  RRPR+PPR P        P++ +P  ++L EI+H   +K+PG+I+++
Subjt:  MGVEELIKSKKEAHERGTRVGHSYDRDHIGQRSTKRRRMEDRGSPRPRSRSPRRRPRSPPRGPTSKFGKYTPTVISP-DKILMEIQHTNLLKYPGRIRSN

Query:  PDKRDRDRYCMYHQDHGHFTKECKQLKDDIEALILNGYLKEFV
        P KR+R++YC +H+DHGH T++C QL++ I  LI  GYL++++
Subjt:  PDKRDRDRYCMYHQDHGHFTKECKQLKDDIEALILNGYLKEFV

A0A7N2N9G0 Reverse transcriptase4.8e-1541.03Show/hide
Query:  QRSTKRRRMED--RGSPRPRSRSPRRRPRSPPRGPTSKFGKYTPTVISPDKILMEIQHTNLLKYPGRIRSNPDKRDRDRYCMYHQDHGHFTKECKQLKDD
        ++  KR R ED  +   R ++R+  RR    PR    +F  +TP     D++LM+I+    L +PG+++S+P+KR RD+YC +H+DHGH T +C  LK  
Subjt:  QRSTKRRRMED--RGSPRPRSRSPRRRPRSPPRGPTSKFGKYTPTVISPDKILMEIQHTNLLKYPGRIRSNPDKRDRDRYCMYHQDHGHFTKECKQLKDD

Query:  IEALILNGYLKEFVEKD
        IEALI  G L+ FV K+
Subjt:  IEALILNGYLKEFVEKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGTAGAGGAGTTGATCAAATCAAAGAAAGAGGCACATGAAAGAGGGACACGAGTGGGTCACTCGTATGACCGAGATCACATTGGCCAGCGGAGCACAAAGAGAAG
AAGGATGGAAGATCGAGGTTCTCCTCGGCCTCGATCAAGGTCACCACGGCGCAGACCAAGGTCACCTCCACGAGGCCCAACAAGCAAGTTTGGAAAGTACACCCCTACGG
TAATCTCGCCTGACAAGATTCTCATGGAAATACAACATACAAATCTACTCAAATATCCAGGGAGGATTAGGTCGAACCCAGATAAAAGAGACAGAGATCGTTATTGTATG
TACCATCAAGATCATGGGCACTTCACTAAAGAATGCAAACAGTTGAAAGATGATATTGAAGCATTGATTCTTAATGGATACCTTAAAGAGTTTGTAGAGAAAGATGAGAA
ACATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGTAGAGGAGTTGATCAAATCAAAGAAAGAGGCACATGAAAGAGGGACACGAGTGGGTCACTCGTATGACCGAGATCACATTGGCCAGCGGAGCACAAAGAGAAG
AAGGATGGAAGATCGAGGTTCTCCTCGGCCTCGATCAAGGTCACCACGGCGCAGACCAAGGTCACCTCCACGAGGCCCAACAAGCAAGTTTGGAAAGTACACCCCTACGG
TAATCTCGCCTGACAAGATTCTCATGGAAATACAACATACAAATCTACTCAAATATCCAGGGAGGATTAGGTCGAACCCAGATAAAAGAGACAGAGATCGTTATTGTATG
TACCATCAAGATCATGGGCACTTCACTAAAGAATGCAAACAGTTGAAAGATGATATTGAAGCATTGATTCTTAATGGATACCTTAAAGAGTTTGTAGAGAAAGATGAGAA
ACATTAG
Protein sequenceShow/hide protein sequence
MGVEELIKSKKEAHERGTRVGHSYDRDHIGQRSTKRRRMEDRGSPRPRSRSPRRRPRSPPRGPTSKFGKYTPTVISPDKILMEIQHTNLLKYPGRIRSNPDKRDRDRYCM
YHQDHGHFTKECKQLKDDIEALILNGYLKEFVEKDEKH