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HG10022123 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10022123
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionMetalloendoproteinase 2-MMP
Genome locationChr05:21081715..21082032
RNA-Seq ExpressionHG10022123
SyntenyHG10022123
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0030198 - extracellular matrix organization (biological process)
GO:0030574 - collagen catabolic process (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0031012 - extracellular matrix (cellular component)
GO:0031225 - anchored component of membrane (cellular component)
GO:0004222 - metalloendopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001818 - Peptidase M10, metallopeptidase
IPR006026 - Peptidase, metallopeptidase
IPR021190 - Peptidase M10A
IPR024079 - Metallopeptidase, catalytic domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN59960.1 hypothetical protein VITISV_011608 [Vitis vinifera]1.9e-3669.9Show/hide
Query:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTKGLNDDDIAGLR
        AD+ I FQRG+HGD +PFDGPGG +AH+F PTDGRLHFDGDESW  G VA    VETVALHE+GH+LGLGHSS+E AI++P I  G TKGLN+DDI G++
Subjt:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTKGLNDDDIAGLR

Query:  ALY
        ALY
Subjt:  ALY

KAD6453092.1 hypothetical protein E3N88_07797 [Mikania micrantha]8.6e-3769.9Show/hide
Query:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTKGLNDDDIAGLR
        AD+ ISF R +HGD +PFDGPGG+LAHAFAP DGRLHFD D+ WA GVV N   VET+ALHE+GH+LGLGHS  + AI+WP   PG TKGLN DDI GLR
Subjt:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTKGLNDDDIAGLR

Query:  ALY
        ALY
Subjt:  ALY

RVW29857.1 Metalloendoproteinase 2-MMP [Vitis vinifera]1.9e-3669.9Show/hide
Query:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTKGLNDDDIAGLR
        AD+ I FQRG+HGD +PFDGPGG +AH+F PTDGRLHFDGDESW  G VA    VETVALHE+GH+LGLGHSS+E AI++P I  G TKGLN+DDI G++
Subjt:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTKGLNDDDIAGLR

Query:  ALY
        ALY
Subjt:  ALY

XP_022133603.1 metalloendoproteinase 1-like [Momordica charantia]2.2e-4075Show/hide
Query:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTKGLNDDDIAGLR
        ADI ISF+RG HGD NPFDG GG+LAHAFAP+DGRLH D DESW  GVV NE  VETVALHELGH+LGLGHS IE AI+WP+++PG+TKGLN DDI G+ 
Subjt:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTKGLNDDDIAGLR

Query:  ALYA
        ALYA
Subjt:  ALYA

XP_038889211.1 metalloendoproteinase 1-like [Benincasa hispida]5.0e-4583.65Show/hide
Query:  MADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTKGLNDDDIAGL
        +ADINISFQRGEHGD NPFDGPGG+  HA APTDGRLHFDGDESW+AGVV NEL V TVALHELGHVLGLGHSSI+QAI+WPY+ PG+ KGLNDDDI GL
Subjt:  MADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTKGLNDDDIAGL

Query:  RALY
        RALY
Subjt:  RALY

TrEMBL top hitse value%identityAlignment
A0A438D372 Metalloendoproteinase 2-MMP9.3e-3769.9Show/hide
Query:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTKGLNDDDIAGLR
        AD+ I FQRG+HGD +PFDGPGG +AH+F PTDGRLHFDGDESW  G VA    VETVALHE+GH+LGLGHSS+E AI++P I  G TKGLN+DDI G++
Subjt:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTKGLNDDDIAGLR

Query:  ALY
        ALY
Subjt:  ALY

A0A5N6PET3 ZnMc domain-containing protein4.2e-3769.9Show/hide
Query:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTKGLNDDDIAGLR
        AD+ ISF R +HGD +PFDGPGG+LAHAFAP DGRLHFD D+ WA GVV N   VET+ALHE+GH+LGLGHS  + AI+WP   PG TKGLN DDI GLR
Subjt:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTKGLNDDDIAGLR

Query:  ALY
        ALY
Subjt:  ALY

A0A6J1BZK9 metalloendoproteinase 1-like1.1e-4075Show/hide
Query:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTKGLNDDDIAGLR
        ADI ISF+RG HGD NPFDG GG+LAHAFAP+DGRLH D DESW  GVV NE  VETVALHELGH+LGLGHS IE AI+WP+++PG+TKGLN DDI G+ 
Subjt:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTKGLNDDDIAGLR

Query:  ALYA
        ALYA
Subjt:  ALYA

A5BBJ8 ZnMc domain-containing protein9.3e-3769.9Show/hide
Query:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTKGLNDDDIAGLR
        AD+ I FQRG+HGD +PFDGPGG +AH+F PTDGRLHFDGDESW  G VA    VETVALHE+GH+LGLGHSS+E AI++P I  G TKGLN+DDI G++
Subjt:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTKGLNDDDIAGLR

Query:  ALY
        ALY
Subjt:  ALY

F6GXC6 ZnMc domain-containing protein2.1e-3669.9Show/hide
Query:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTKGLNDDDIAGLR
        AD+ I FQRG+HGD  PFDGPGG +AH+F+PTDGRLHFDGDESW  G VA    VETVALHE+GH+LGLGHSS+E AI++P I  G TKGLN+DDI G++
Subjt:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTKGLNDDDIAGLR

Query:  ALY
        ALY
Subjt:  ALY

SwissProt top hitse value%identityAlignment
O04529 Metalloendoproteinase 2-MMP6.7e-2446.85Show/hide
Query:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAG-------VVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GLN
        +DI I F  G+HGD  PFDG  G LAHAF+P  G+ H D DE+W           V   + +E+VA+HE+GH+LGLGHSS+E++I++P I  G  K  L 
Subjt:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAG-------VVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GLN

Query:  DDDIAGLRALY
        +DD+ G++ LY
Subjt:  DDDIAGLRALY

P29136 Metalloendoproteinase 11.1e-2655.45Show/hide
Query:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAA------GVVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GLND
        A+I I F    HGD  PFDGPGGIL HAFAPTDGR HFD DE W A        V +   +E+VA+HE+GH+LGLGHSS  +AI++P I P + K  L  
Subjt:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAA------GVVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GLND

Query:  DDIAGLRALY
        DDI G+R LY
Subjt:  DDIAGLRALY

Q5XF51 Metalloendoproteinase 3-MMP8.7e-2447.32Show/hide
Query:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAG--------VVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GL
        +DI+I F  GEHGD  PFDGP   LAHAF+P  G  H DG+E+W            V+  + +E+VA+HE+GH+LGLGHSS+E +I++P I  G  K  L
Subjt:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAG--------VVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GL

Query:  NDDDIAGLRALY
          DD+ G++ LY
Subjt:  NDDDIAGLRALY

Q8GWW6 Metalloendoproteinase 4-MMP3.5e-2550.46Show/hide
Query:  MADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIV----ETVALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GLNDD
        +ADI I F  G+HGD  PFDG  G+LAH F+P +GRLH D  E+WA      +  V    E+VA+HE+GHVLGLGHSS++ A ++P ++P S K  LN D
Subjt:  MADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIV----ETVALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GLNDD

Query:  DIAGLRALY
        D+ G+++LY
Subjt:  DIAGLRALY

Q9ZUJ5 Metalloendoproteinase 5-MMP1.5e-2350.44Show/hide
Query:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESW--AAGVVANELI-------VETVALHELGHVLGLGHSSIEQAILWPYIEPGSTK-G
        ADI I F  GEHGD  PFDG  G LAHA +P  G LH DGDE W  + G ++  ++       +E+VA+HE+GH+LGLGHSS+E AI++P I  G  K  
Subjt:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESW--AAGVVANELI-------VETVALHELGHVLGLGHSSIEQAILWPYIEPGSTK-G

Query:  LNDDDIAGLRALY
        L  DDI G++ LY
Subjt:  LNDDDIAGLRALY

Arabidopsis top hitse value%identityAlignment
AT1G24140.1 Matrixin family protein6.2e-2547.32Show/hide
Query:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAG--------VVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GL
        +DI+I F  GEHGD  PFDGP   LAHAF+P  G  H DG+E+W            V+  + +E+VA+HE+GH+LGLGHSS+E +I++P I  G  K  L
Subjt:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAG--------VVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GL

Query:  NDDDIAGLRALY
          DD+ G++ LY
Subjt:  NDDDIAGLRALY

AT1G59970.1 Matrixin family protein1.1e-2450.44Show/hide
Query:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESW--AAGVVANELI-------VETVALHELGHVLGLGHSSIEQAILWPYIEPGSTK-G
        ADI I F  GEHGD  PFDG  G LAHA +P  G LH DGDE W  + G ++  ++       +E+VA+HE+GH+LGLGHSS+E AI++P I  G  K  
Subjt:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESW--AAGVVANELI-------VETVALHELGHVLGLGHSSIEQAILWPYIEPGSTK-G

Query:  LNDDDIAGLRALY
        L  DDI G++ LY
Subjt:  LNDDDIAGLRALY

AT1G70170.1 matrix metalloproteinase4.7e-2546.85Show/hide
Query:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAG-------VVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GLN
        +DI I F  G+HGD  PFDG  G LAHAF+P  G+ H D DE+W           V   + +E+VA+HE+GH+LGLGHSS+E++I++P I  G  K  L 
Subjt:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAG-------VVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GLN

Query:  DDDIAGLRALY
        +DD+ G++ LY
Subjt:  DDDIAGLRALY

AT2G45040.1 Matrixin family protein2.5e-2650.46Show/hide
Query:  MADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIV----ETVALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GLNDD
        +ADI I F  G+HGD  PFDG  G+LAH F+P +GRLH D  E+WA      +  V    E+VA+HE+GHVLGLGHSS++ A ++P ++P S K  LN D
Subjt:  MADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIV----ETVALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GLNDD

Query:  DIAGLRALY
        D+ G+++LY
Subjt:  DIAGLRALY

AT4G16640.1 Matrixin family protein6.8e-2449.54Show/hide
Query:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAA-----GVVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GLNDD
        AD+ I F  G+HGD  PFDG  G LAHAFAP +GRLH D  E+W       G     + +E+VA HE+GH+LGLGHSS E A+++P + P + K  L  D
Subjt:  ADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAA-----GVVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GLNDD

Query:  DIAGLRALY
        D+AG+  LY
Subjt:  DIAGLRALY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGACATTAATATCAGCTTTCAAAGAGGGGAGCATGGAGATGAGAATCCTTTTGATGGGCCTGGGGGAATTTTGGCTCATGCTTTTGCACCAACTGATGGGAGATT
GCATTTTGATGGGGATGAGAGTTGGGCTGCGGGAGTGGTTGCTAATGAGTTAATTGTGGAGACTGTGGCACTTCATGAGCTTGGACATGTTCTTGGGCTTGGCCATAGCT
CCATTGAACAAGCCATCCTGTGGCCCTATATTGAGCCTGGTTCCACCAAGGGCTTGAATGATGATGATATCGCTGGACTTCGTGCTTTGTATGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGACATTAATATCAGCTTTCAAAGAGGGGAGCATGGAGATGAGAATCCTTTTGATGGGCCTGGGGGAATTTTGGCTCATGCTTTTGCACCAACTGATGGGAGATT
GCATTTTGATGGGGATGAGAGTTGGGCTGCGGGAGTGGTTGCTAATGAGTTAATTGTGGAGACTGTGGCACTTCATGAGCTTGGACATGTTCTTGGGCTTGGCCATAGCT
CCATTGAACAAGCCATCCTGTGGCCCTATATTGAGCCTGGTTCCACCAAGGGCTTGAATGATGATGATATCGCTGGACTTCGTGCTTTGTATGCCTAA
Protein sequenceShow/hide protein sequence
MADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTKGLNDDDIAGLRALYA